mRNA_Ecto-sp13_S_contig16548.4706.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A6H5KDQ6_9PHAE (HSP100 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ6_9PHAE) HSP 1 Score: 632 bits (1629), Expect = 9.320e-227 Identity = 334/338 (98.82%), Postives = 336/338 (99.41%), Query Frame = 1
Query: 1 SKQGRVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
SKQGRVSDTSSKSMGQTLQKV+ AASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKY RDLTQAARDGKLDPVIGRDDEIRRT+QILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS
Sbjct: 77 SKQGRVSDTSSKSMGQTLQKVIVAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYSRDLTQAARDGKLDPVIGRDDEIRRTIQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 414
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: D7FMK6_ECTSI (ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK6_ECTSI) HSP 1 Score: 629 bits (1622), Expect = 1.140e-218 Identity = 333/338 (98.52%), Postives = 335/338 (99.11%), Query Frame = 1
Query: 1 SKQGRVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
SKQGRVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVS+EHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKY RDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVT SDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIE +
Sbjct: 77 SKQGRVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSIEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYSRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTESDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEVT 414
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A835Z9T5_9STRA (ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9T5_9STRA) HSP 1 Score: 499 bits (1284), Expect = 5.350e-168 Identity = 255/308 (82.79%), Postives = 281/308 (91.23%), Query Frame = 1
Query: 91 ELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
+ GD F S+EHL LAL+ +DTRFT++ LQ QG + K+ DA+ IRG QKV SRNPEA+YEAL +Y RDLTQAAR+GKLDPVIGRDDEIRRT+QILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGR+L++LDMGALIAGAKYRGEFEERLKAVLKE+T S G VV FIDEIH+VVGAGATSG+MDASNLLKPMLARGEL CIGATTLNEYKQ +EKDKALERRFQQV+VKQP VEDTVSILRGLKERYEVHH VR+QD++LVAAAQLS+RYI DRFLPDKAIDLVDEAAAKLNIE +
Sbjct: 90 KFGDKFCSIEHLVLALSSDDTRFTRRELQRQGITEAKLRDAIKEIRGKQKVDSRNPEASYEALSQYSRDLTQAAREGKLDPVIGRDDEIRRTIQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRRLIALDMGALIAGAKYRGEFEERLKAVLKEITESGGNVVTFIDEIHSVVGAGATSGAMDASNLLKPMLARGELSCIGATTLNEYKQFIEKDKALERRFQQVYVKQPTVEDTVSILRGLKERYEVHHKVRIQDSALVAAAQLSNRYITDRFLPDKAIDLVDEAAAKLNIEVT 397
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A4D9CQJ1_9STRA (Clp R domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQJ1_9STRA) HSP 1 Score: 499 bits (1285), Expect = 1.060e-167 Identity = 261/336 (77.68%), Postives = 295/336 (87.80%), Query Frame = 1
Query: 7 QGRVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
Q +V D S+K M TLQKV+ A + + D +VSVEHL L L D+RF K AL QG + +I +A+ +IRG VTSR PEA+YEALE+Y RDLTQAA+DGKLDPVIGRDDEIRRT+QILSRRTKNNPILLGEPGVGKTAIAEGLAQRIV+GDVPE LK R+LV+LDMGALIAGAKYRGEFEERLKAVLKEVT S+GQ++MFIDEIHTVVGAGATSG+MDASNLLKPMLARGELRCIGATTL EYKQ +EKDKALERRFQQV V+QP+VEDT++ILRGLK+RYEVHHGVR++D+SLVAAAQLSHRYI+DRFLPDKAIDLVDEAAAKLNIE +
Sbjct: 81 QPKVPDASNKMMSNTLQKVLDEAFKERDAMRDQYVSVEHLLLGLVAHDSRFLKPALTKQGVTEAQIREAIASIRGNNVVTSRTPEASYEALEQYSRDLTQAAKDGKLDPVIGRDDEIRRTIQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVSGDVPEPLKKRRLVALDMGALIAGAKYRGEFEERLKAVLKEVTESNGQIIMFIDEIHTVVGAGATSGAMDASNLLKPMLARGELRCIGATTLAEYKQFIEKDKALERRFQQVMVEQPSVEDTIAILRGLKDRYEVHHGVRIRDSSLVAAAQLSHRYISDRFLPDKAIDLVDEAAAKLNIEVT 416
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A482RZ81_9ARCH (AAA family ATPase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ81_9ARCH) HSP 1 Score: 473 bits (1218), Expect = 5.470e-164 Identity = 251/334 (75.15%), Postives = 281/334 (84.13%), Query Frame = 1
Query: 13 RVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
RVSDTS+KSMG+TLQ + ASA + E D F+SVEHL L A E +K+ + + AV +IRG KVTSRN E AYEAL+KY RDLT AA +GKLDPVIGRD+EIRR +QILSRRTKNNPILLGEPGVGKTAIAEGLAQRIV+GDVPE+LKGRQL+SLDMGALIAGAKYRGEFEERLKAVL EV A+ GQVV+FIDEIHTVVGAGAT GSMDA NLLKP+LARGELRCIGATTL EYK +EKDKALERRFQQV++ QP VEDT+SILRGLK++YEVHHGVR+ DA+LVAAA LSHRYI +RFLPDKAIDLVDEAAAKL IE +
Sbjct: 85 RVSDTSTKSMGRTLQDCLNKASAIKKEFTDQFISVEHLLLGAA-ETEGLSKRLFSELSLTLPTLKQAVQSIRGSNKVTSRNAEQAYEALQKYSRDLTAAAAEGKLDPVIGRDEEIRRAIQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVSGDVPETLKGRQLLSLDMGALIAGAKYRGEFEERLKAVLNEVQAAQGQVVLFIDEIHTVVGAGATEGSMDAGNLLKPLLARGELRCIGATTLKEYKLYIEKDKALERRFQQVYISQPTVEDTISILRGLKDKYEVHHGVRITDAALVAAATLSHRYITERFLPDKAIDLVDEAAAKLKIEVT 417
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A1B7W9K9_9NOST (Clp protease ClpB (Fragment) n=1 Tax=Anabaena sp. MDT14b TaxID=1710886 RepID=A0A1B7W9K9_9NOST) HSP 1 Score: 469 bits (1208), Expect = 2.820e-162 Identity = 244/336 (72.62%), Postives = 289/336 (86.01%), Query Frame = 1
Query: 4 KQGRVSDTS-SKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIE 1008
+Q +VS TS S +G++L ++ A + E D F+S+EHL L A++D RF K LQ+ G D+ K+ + + IRG QKVT +NPE Y++LEKYGRDLT+AAR G+LDPVIGRDDEIRRTVQILSRRTKNNP+L+GEPGVGKTAIAEGLAQRIVAGDVP+SLK R+L+SLDMGALIAGAK+RGEFEERLKAVLKEVT S G +V+FIDEIHTVVGAGA+ G+MDA NLLKPMLARGELRCIGATTL+EY++ +EKD ALERRFQQV+V QPNV+DT+SILRGLKERYEVHHGVR+ D+SLVAAA LS+RYI+DRFLPDKAIDLVDEAAA+L +E
Sbjct: 72 RQPKVSGTSASVYLGRSLDTLLDRAEKYRQEFKDEFISIEHLLLGYAKDD-RFGKSLLQEFGLDESKLKNIIKEIRGKQKVTDQNPEGKYQSLEKYGRDLTEAARKGQLDPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKLISLDMGALIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGASQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYLEKDAALERRFQQVYVDQPNVQDTISILRGLKERYEVHHGVRISDSSLVAAATLSNRYISDRFLPDKAIDLVDEAAARLKME 406
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A7R9U5N7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5N7_9STRA) HSP 1 Score: 483 bits (1244), Expect = 5.060e-161 Identity = 251/334 (75.15%), Postives = 287/334 (85.93%), Query Frame = 1
Query: 13 RVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
+VSD ++K MG TLQKV+ AA + E GD++VS EHL L+L D+ FT+K LQ G + K+ +V IRG KV S+NPEA YEAL KYGRDLT+ A GKLDPVIGRD+EIRR +QILSRRTKNNPILLGEPGVGKTAIAEGLAQRIV+GDVPESLK R++VSLDMGALIAGAKYRGEFEERLKAVLKEV+ SDG +V+FIDEIHTVVGAG TSG+MDASNLLKPMLARGELRCIGATTLNEY+Q + +DKALERRFQQV V QP VE+ +SILRGLK+RYEVHHGVR++D++LVAAAQLS RYI DRFLPDKAIDLVDEAAAKLN+E +
Sbjct: 156 KVSDVTNKVMGSTLQKVLKAALGLRREYGDTYVSNEHLLLSLFSNDSSFTRKELQRDGVTEDKLRASVKNIRGVNKVDSKNPEATYEALSKYGRDLTEDAASGKLDPVIGRDEEIRRVIQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVSGDVPESLKRRRVVSLDMGALIAGAKYRGEFEERLKAVLKEVSESDGSIVLFIDEIHTVVGAGQTSGAMDASNLLKPMLARGELRCIGATTLNEYRQYISEDKALERRFQQVIVNQPTVEEAISILRGLKDRYEVHHGVRIRDSALVAAAQLSQRYITDRFLPDKAIDLVDEAAAKLNMEVT 489
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A7S2W0U8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0U8_9STRA) HSP 1 Score: 479 bits (1233), Expect = 1.060e-160 Identity = 246/327 (75.23%), Postives = 286/327 (87.46%), Query Frame = 1
Query: 34 KSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
K MG TLQ+V+ A QA + DSF++V+HL L+LA+EDTRF + AL+ QG + +A+ A+RG KVTS++ + +EALE+YG+DLT+AA DGKLDPVIGRDDEIRR VQILSRRTKNNPILLGEPGVGKTAIAEGLAQRI++GDVP+SLK R+LVSLDMGALIAGAKYRGEFEERLKAVL EV SDG +V+FIDEIHTVVGAGATSG+MDASNLLKP+LARGELRCIGATTL EYK+ +EKDKALERRFQQV V QP+VED VSILRGLKERYEVHHGVR++D++++AAA LS RY++DRFLPDKAIDLVDEAAAKLN E S
Sbjct: 43 KVMGATLQRVIKTAGDLQASMQDSFIAVDHLVLSLAKEDTRFLQDALRKQGVMTASVEEALRAVRGGSKVTSQSSDTTFEALEQYGQDLTRAAMDGKLDPVIGRDDEIRRAVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIISGDVPDSLKQRRLVSLDMGALIAGAKYRGEFEERLKAVLSEVQQSDGNIVLFIDEIHTVVGAGATSGAMDASNLLKPLLARGELRCIGATTLKEYKEYIEKDKALERRFQQVMVPQPSVEDAVSILRGLKERYEVHHGVRIKDSAIIAAASLSDRYVSDRFLPDKAIDLVDEAAAKLNNEVS 369
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A6U4GP70_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GP70_9STRA) HSP 1 Score: 479 bits (1233), Expect = 1.870e-159 Identity = 248/334 (74.25%), Postives = 286/334 (85.63%), Query Frame = 1
Query: 13 RVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
+VSD S+K MGQ+LQ V++ A + + GD +VS EHL LAL + RFT + L+ G D+ K+ +V +RG K ++NPEA YEALE+YGRDLT A GKLDPVIGRD+EIRR +QILSRRTKNNPILLGEPGVGKTAIAEGLAQRIV+GDVPESLK R LV+LDMGALIAGAKYRGEFEERLKAVLKEV+ SDG VV+FIDEIHTVVGAGAT G+MDASNLLKPMLARGELRCIGATTLNEY+Q++ +DKALERRFQQV V QP+VE+ +SILRGLK+RYEVHHGVR++D+SLVAAAQLS RYI DRFLPDKAIDLVDEAAAKLN+E +
Sbjct: 149 KVSDVSNKVMGQSLQTVLSKALGIRGDFGDRYVSTEHLLLALFLHEPRFTARELKAAGVDEAKLRASVEKVRGANKADTKNPEATYEALEQYGRDLTADAAAGKLDPVIGRDEEIRRVIQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVSGDVPESLKRRTLVALDMGALIAGAKYRGEFEERLKAVLKEVSESDGNVVLFIDEIHTVVGAGATGGAMDASNLLKPMLARGELRCIGATTLNEYRQHISEDKALERRFQQVIVDQPSVEEAISILRGLKDRYEVHHGVRIRDSSLVAAAQLSQRYITDRFLPDKAIDLVDEAAAKLNMEVT 482
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A5GSF0_SYNR3 (Chaperone protein ClpB n=7 Tax=Synechococcales TaxID=1890424 RepID=A5GSF0_SYNR3) HSP 1 Score: 475 bits (1222), Expect = 7.860e-159 Identity = 241/323 (74.61%), Postives = 283/323 (87.62%), Query Frame = 1
Query: 40 MGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIE 1008
+G+ LQ ++ A + E GDS++S+EHL LALA D+R ++ L D G DK + +A+ A+RG Q+VT +NPE YE+L+KYGRDLT AARDGKLDPVIGRD+EIRRT+QILSRRTKNNP+L+GEPGVGKTAI EGLAQRIV GDVP +L+ RQL++LDMGALIAGAKYRGEFEERLKAVLKEVT+SDGQ+V+FIDEIHTVVGAGAT G+MDASNLLKPMLARGELRCIGATTL+E++Q++EKD ALERRFQQVFV QP VEDT+SILRGLKERYEVHHGVR+ D +LVAAA LS RYIADRFLPDKAIDLVDE+AA+L +E
Sbjct: 85 LGKGLQSLLEQAERNKQEFGDSYISIEHLLLALAG-DSRCGRQLLLDNGVQDKTLREAIQAVRGSQRVTDQNPEGTYESLQKYGRDLTAAARDGKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPSALQNRQLIALDMGALIAGAKYRGEFEERLKAVLKEVTSSDGQIVLFIDEIHTVVGAGATGGAMDASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVFVDQPTVEDTISILRGLKERYEVHHGVRIADTALVAAAVLSSRYIADRFLPDKAIDLVDESAARLKME 406 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16548.4706.1 >prot_Ecto-sp13_S_contig16548.4706.1 ID=prot_Ecto-sp13_S_contig16548.4706.1|Name=mRNA_Ecto-sp13_S_contig16548.4706.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=338bp SKQGRVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDback to top mRNA from alignment at Ecto-sp13_S_contig16548:374..3860+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16548.4706.1 ID=mRNA_Ecto-sp13_S_contig16548.4706.1|Name=mRNA_Ecto-sp13_S_contig16548.4706.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3487bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16548:374..3860+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16548:374..3860+ >mRNA_Ecto-sp13_S_contig16548.4706.1 ID=mRNA_Ecto-sp13_S_contig16548.4706.1|Name=mRNA_Ecto-sp13_S_contig16548.4706.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1014bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16548:374..3860+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |