mRNA_Ecto-sp13_S_contig16486.4674.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16486.4674.1
Unique NamemRNA_Ecto-sp13_S_contig16486.4674.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: A0A6H5JV32_9PHAE (Selenoprotein O n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV32_9PHAE)

HSP 1 Score: 517 bits (1332), Expect = 1.180e-178
Identity = 252/255 (98.82%), Postives = 255/255 (100.00%), Query Frame = 1
Query:    1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSGRWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
            GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSGRWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGP+GSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMS+LGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPE+
Sbjct:  177 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSGRWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPKGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSILGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEM 431          
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: A0A836CN66_9STRA (Selenoprotein O n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN66_9STRA)

HSP 1 Score: 387 bits (995), Expect = 4.270e-129
Identity = 193/258 (74.81%), Postives = 213/258 (82.56%), Query Frame = 1
Query:    1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSG-RWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFP--GAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
            GNKL PGA PHAH YCGHQFGSF+GQLGDGAAMYLGEV    G RWE+QFKGAG TPYSR  DGRKVLRSSIREFLCSEAMH+LGIPTTRAA++VTSDT V+RD+FYTG+VI ERA+IV R+APTFLRFGSFEIFK  DP TGR GPS GN  L  +ML Y++  FFP   AAAAGP G  A  L MYE+ V+ TAEL A WQCVGFTHGVLNTDNMS+LGLTIDYGPYGFM+ FD  +VPNGSDG GRY Y+ QPE+
Sbjct:   79 GNKLFPGASPHAHCYCGHQFGSFSGQLGDGAAMYLGEVVNERGERWEMQFKGAGPTPYSRRGDGRKVLRSSIREFLCSEAMHYLGIPTTRAASMVTSDTLVQRDLFYTGDVINERATIVLRIAPTFLRFGSFEIFKGTDPTTGRRGPSEGNVDLLKKMLHYSLSTFFPEAAAAAAGPGGLPAGTLMMYEDVVKRTAELAAAWQCVGFTHGVLNTDNMSLLGLTIDYGPYGFMEHFDRDYVPNGSDGTGRYRYQDQPEI 336          
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: A0A7S2V3H2_9STRA (Selenoprotein O n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3H2_9STRA)

HSP 1 Score: 381 bits (978), Expect = 1.280e-125
Identity = 186/256 (72.66%), Postives = 209/256 (81.64%), Query Frame = 1
Query:    1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSG-RWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
            GNKL+PGA P AH YCGHQFG+FAGQLGDGA MYLGEV      RWEIQFKGAG TPYSR ADGRKVLRSSIREFLCSEA HFLGIPTTRA  LVTS+TKV RDV+YTGN I E+ASIV R+AP+FLRFGSFEIFKP D  TGR GPS GN AL  Q+L++AI ++FP  AAA    S   Y AMY+E V+ TA LVA WQC GFTHGVLNTDNMS+LGLTIDYGP+GFM+++DP +VPNGSD  GRYSY +QP++
Sbjct:  136 GNKLLPGADPAAHCYCGHQFGTFAGQLGDGATMYLGEVINQKNERWEIQFKGAGKTPYSRRADGRKVLRSSIREFLCSEANHFLGIPTTRAGTLVTSNTKVVRDVYYTGNPILEKASIVLRIAPSFLRFGSFEIFKPSDALTGRKGPSVGNTALLHQLLDFAIAQYFPEVAAAHAPASVESYAAMYKEVVQKTARLVALWQCTGFTHGVLNTDNMSILGLTIDYGPFGFMEYYDPNYVPNGSDNAGRYSYTKQPDI 391          
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: A0A2B4RRY1_STYPI (Selenoprotein O n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4RRY1_STYPI)

HSP 1 Score: 366 bits (939), Expect = 3.010e-120
Identity = 177/256 (69.14%), Postives = 203/256 (79.30%), Query Frame = 1
Query:    1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSG-RWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
            GNK++PGA+P AH YCGHQFG F+GQLGDGA MYLGEV    G RWE+QFKGAGLTPYSR ADGRKVLRSSIREFLCSEAMHFLGIPTTRA + VTSDT++ RD+FY GN I+ER +I+ R+APTF+RFGSFEIFKP DP TGR GPS G   + +Q+L+Y +  FFP       E +   YLA ++E VR TA LVA WQCVGF HGVLNTDNMSVLGLTIDYGP+GFMD +DP+ V N SD  GRY YE QPE+
Sbjct:   91 GNKILPGAEPSAHCYCGHQFGYFSGQLGDGATMYLGEVVNERGERWEMQFKGAGLTPYSRQADGRKVLRSSIREFLCSEAMHFLGIPTTRAGSCVTSDTRITRDIFYDGNPIRERCTIILRIAPTFIRFGSFEIFKPTDPMTGRKGPSEGRTDILIQLLDYTVQTFFPQVVTGDKEEA---YLAFFKEVVRLTARLVALWQCVGFCHGVLNTDNMSVLGLTIDYGPFGFMDHYDPEHVCNASDDQGRYRYEAQPEI 343          
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: UPI001CF1ED27 (protein adenylyltransferase SelO, mitochondrial-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF1ED27)

HSP 1 Score: 357 bits (915), Expect = 8.450e-120
Identity = 169/256 (66.02%), Postives = 201/256 (78.52%), Query Frame = 1
Query:    1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEV-EGPSGRWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
            GNK++PGA+P AH YCGHQFG F+GQLGDGA MYLGEV      RWEIQFKGAGLTP+SR ADGRKVLRSSIREFLCSEAMHFLG+PTTRA + VTSD+K+ RD+FY GN I+E+ ++V R+APTF+RFGSFEIFKP D  TGR GPSAG   + +Q+L+Y +  FFP       E +   YL  ++E  R TA+LVA WQCVGF HGVLNTDNMS+LGLTIDYGP+GF+D++DP  V N SD  GRY +E QPE+
Sbjct:  130 GNKILPGAEPAAHCYCGHQFGYFSGQLGDGATMYLGEVVNNKDQRWEIQFKGAGLTPFSRQADGRKVLRSSIREFLCSEAMHFLGVPTTRAGSCVTSDSKIIRDIFYNGNAIREKCTVVLRIAPTFIRFGSFEIFKPVDSMTGRRGPSAGRTDIMVQLLDYTVNTFFPEVITGNKEDT---YLGFFKEVARRTAKLVAMWQCVGFCHGVLNTDNMSILGLTIDYGPFGFLDYYDPNHVCNASDDHGRYRFEAQPEI 382          
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: A0A2P4SK90_BAMTH (Selenoprotein O (Fragment) n=5 Tax=Neognathae TaxID=8825 RepID=A0A2P4SK90_BAMTH)

HSP 1 Score: 357 bits (915), Expect = 8.060e-119
Identity = 170/256 (66.41%), Postives = 204/256 (79.69%), Query Frame = 1
Query:    1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSG-RWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
            GN+L PG++P AH YCGHQFGSFAGQLGDGAA+YLGEV GP G RWE+Q KGAG+TP+SR ADGRKVLRSSIREFLCSEAM  LGIPTTRA   VTSD++V RD+FY GN  +ER ++V R+APTF+RFGSFEIFKP D  TGR GPS   + +R+QML+Y IG F+P    A  + S  R  A ++E  + TA LVA+WQCVGF HGVLNTDNMS++GLTIDYGP+GFMD +DP+ + NGSD  GRY+Y +QPE+
Sbjct:  106 GNRLPPGSEPAAHCYCGHQFGSFAGQLGDGAAIYLGEVRGPRGARWELQLKGAGITPFSRQADGRKVLRSSIREFLCSEAMFHLGIPTTRAGTCVTSDSEVVRDIFYDGNPKKERCTVVLRIAPTFIRFGSFEIFKPPDEYTGRKGPSVNRNDIRIQMLDYVIGTFYPEIQEAHADNSIQRNAAFFKEITKRTARLVAEWQCVGFCHGVLNTDNMSIVGLTIDYGPFGFMDRYDPEHICNGSDNTGRYAYNKQPEI 361          
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: A0A7L2HGW7_SAGSE (Selenoprotein O (Fragment) n=1 Tax=Sagittarius serpentarius TaxID=56258 RepID=A0A7L2HGW7_SAGSE)

HSP 1 Score: 353 bits (906), Expect = 1.610e-118
Identity = 172/256 (67.19%), Postives = 201/256 (78.52%), Query Frame = 1
Query:    1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSG-RWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
            GN+L+ G++P AH YCGHQFGSFAGQLGDGAAMYLGEV GP G RWEIQ KGAGLTP+SR ADGRKVLRSSIREFLCSEAM  LGIPTTRA   VTSD+KV RDVFY GN   ER ++V R+A TF+RFGSFEIFKP D  TGR GPS   + +R+QML+Y I  F+P    A  + S  R  A ++E  + TA LVA+WQCVGF HGVLNTDNMS++GLTIDYGP+GFMD +DP+ + NGSD  GRY+Y +QPE+
Sbjct:   29 GNRLLAGSEPAAHCYCGHQFGSFAGQLGDGAAMYLGEVLGPRGERWEIQLKGAGLTPFSRQADGRKVLRSSIREFLCSEAMFHLGIPTTRAGTCVTSDSKVVRDVFYDGNPKSERCTVVLRIASTFIRFGSFEIFKPTDEYTGRKGPSVNRNDIRIQMLDYVISTFYPEIQEAYSDNSIQRNAAFFKEITKRTARLVAEWQCVGFCHGVLNTDNMSIVGLTIDYGPFGFMDRYDPEHICNGSDNTGRYAYNKQPEI 284          
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: A0A7K7W461_9AVES (Selenoprotein O (Fragment) n=7 Tax=Aves TaxID=8782 RepID=A0A7K7W461_9AVES)

HSP 1 Score: 358 bits (918), Expect = 3.270e-118
Identity = 172/256 (67.19%), Postives = 202/256 (78.91%), Query Frame = 1
Query:    1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSG-RWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
            GN+L+PG++P AH YCGHQFGSFAGQLGDGAAMYLGEV GP G RWE+Q KGAGLTP+SR ADGRKVLRSSIREFLCSEAM  LGIPTTRA   VTSD+KV RD+FY GN   ER ++V R+A TFLRFGSFEIFKP D  TGR GPS   + +R+QML+Y IG F+P       + S  R  A ++E  + TA LVA+WQCVGF HGVLNTDNMS++GLTIDYGP+GFMD +DP+ + NGSD  GRY+Y +QPE+
Sbjct:   12 GNRLLPGSEPAAHCYCGHQFGSFAGQLGDGAAMYLGEVLGPGGERWELQLKGAGLTPFSRQADGRKVLRSSIREFLCSEAMFHLGIPTTRAGTCVTSDSKVVRDIFYDGNPKNERCTVVLRIASTFLRFGSFEIFKPTDEHTGRKGPSVDRNDIRIQMLDYVIGTFYPDIQETYSDNSIQRNAAFFKEITKRTARLVAEWQCVGFCHGVLNTDNMSIVGLTIDYGPFGFMDRYDPEHICNGSDNTGRYAYNKQPEI 267          
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: G3PJI5_GASAC (Selenoprotein O n=1 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3PJI5_GASAC)

HSP 1 Score: 357 bits (915), Expect = 4.050e-118
Identity = 175/267 (65.54%), Postives = 202/267 (75.66%), Query Frame = 1
Query:    1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEV------------EGPSGRWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
            G+++MPG++P AH YCGHQFG FAGQLGDGAA YLGEV            E PSGRWE+Q KGAGLTPYSR ADGRKVLRSSIREFLCSE MHFLG+PTTRAA +VTSDT+V RDV+Y+GN   ER S V R+APTFLRFGSFEIFK  D  TGR GPS G D +R QM++Y I  F+P      P+  + R +A + E  R TA +VA+WQCVGF HGVLNTDNMS+LGLT+DYGPYGFMD FDP F+ N SD  GRYSY+ QP +
Sbjct:   72 GSRIMPGSEPAAHCYCGHQFGQFAGQLGDGAACYLGEVKVPPGQDPELLRENPSGRWEMQVKGAGLTPYSRQADGRKVLRSSIREFLCSEVMHFLGVPTTRAACVVTSDTRVVRDVYYSGNPRNERCSAVVRIAPTFLRFGSFEIFKQADEHTGRQGPSYGRDEIRGQMMDYVIEMFYPDIQRDHPDRVE-RNVAFFREVTRRTARVVAQWQCVGFCHGVLNTDNMSILGLTLDYGPYGFMDRFDPDFICNASDNSGRYSYQAQPAI 337          
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: G3PJH3_GASAC (Selenoprotein O n=1 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3PJH3_GASAC)

HSP 1 Score: 357 bits (915), Expect = 8.500e-118
Identity = 175/267 (65.54%), Postives = 202/267 (75.66%), Query Frame = 1
Query:    1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEV------------EGPSGRWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
            G+++MPG++P AH YCGHQFG FAGQLGDGAA YLGEV            E PSGRWE+Q KGAGLTPYSR ADGRKVLRSSIREFLCSE MHFLG+PTTRAA +VTSDT+V RDV+Y+GN   ER S V R+APTFLRFGSFEIFK  D  TGR GPS G D +R QM++Y I  F+P      P+  + R +A + E  R TA +VA+WQCVGF HGVLNTDNMS+LGLT+DYGPYGFMD FDP F+ N SD  GRYSY+ QP +
Sbjct:   84 GSRIMPGSEPAAHCYCGHQFGQFAGQLGDGAACYLGEVKVPPGQDPELLRENPSGRWEMQVKGAGLTPYSRQADGRKVLRSSIREFLCSEVMHFLGVPTTRAACVVTSDTRVVRDVYYSGNPRNERCSAVVRIAPTFLRFGSFEIFKQADEHTGRQGPSYGRDEIRGQMMDYVIEMFYPDIQRDHPDRVE-RNVAFFREVTRRTARVVAQWQCVGFCHGVLNTDNMSILGLTLDYGPYGFMDRFDPDFICNASDNSGRYSYQAQPAI 349          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV32_9PHAE1.180e-17898.82Selenoprotein O n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A836CN66_9STRA4.270e-12974.81Selenoprotein O n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A7S2V3H2_9STRA1.280e-12572.66Selenoprotein O n=1 Tax=Fibrocapsa japonica TaxID=... [more]
A0A2B4RRY1_STYPI3.010e-12069.14Selenoprotein O n=3 Tax=Pocilloporidae TaxID=46729... [more]
UPI001CF1ED278.450e-12066.02protein adenylyltransferase SelO, mitochondrial-li... [more]
A0A2P4SK90_BAMTH8.060e-11966.41Selenoprotein O (Fragment) n=5 Tax=Neognathae TaxI... [more]
A0A7L2HGW7_SAGSE1.610e-11867.19Selenoprotein O (Fragment) n=1 Tax=Sagittarius ser... [more]
A0A7K7W461_9AVES3.270e-11867.19Selenoprotein O (Fragment) n=7 Tax=Aves TaxID=8782... [more]
G3PJI5_GASAC4.050e-11865.54Selenoprotein O n=1 Tax=Gasterosteus aculeatus Tax... [more]
G3PJH3_GASAC8.500e-11865.54Selenoprotein O n=1 Tax=Gasterosteus aculeatus Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16486contigEcto-sp13_S_contig16486:410..3787 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score514.6
Seed ortholog evalue2.6e-143
Seed eggNOG ortholog2880.D8LIY8
Preferred nameSELENOO
Model size765
KEGG koko:K20865
KEGG Pathwayko04621,map04621
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
Exons5
EggNOG free text desc.Uncharacterized ACR, YdiU/UPF0061 family
EggNOG OGsCOG0397@1,KOG2542@2759
Ec32 ortholog descriptionselenoprotein O homolog, but not a selenoprotein itself
Ec32 orthologEc-20_002060.1
Cds size753
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16486.4674.1prot_Ecto-sp13_S_contig16486.4674.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16486 410..3775 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462866.8334677-CDS-Ecto-sp13_S_contig16486:409..6231681462866.8334677-CDS-Ecto-sp13_S_contig16486:409..623Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16486 410..623 -
1681462866.8466036-CDS-Ecto-sp13_S_contig16486:1272..14751681462866.8466036-CDS-Ecto-sp13_S_contig16486:1272..1475Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16486 1273..1475 -
1681462866.8570688-CDS-Ecto-sp13_S_contig16486:1921..20741681462866.8570688-CDS-Ecto-sp13_S_contig16486:1921..2074Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16486 1922..2074 -
1681462866.8669775-CDS-Ecto-sp13_S_contig16486:2611..26751681462866.8669775-CDS-Ecto-sp13_S_contig16486:2611..2675Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16486 2612..2675 -
1681462866.8774357-CDS-Ecto-sp13_S_contig16486:3656..37751681462866.8774357-CDS-Ecto-sp13_S_contig16486:3656..3775Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16486 3657..3775 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462866.891931-UTR-Ecto-sp13_S_contig16486:3775..37871681462866.891931-UTR-Ecto-sp13_S_contig16486:3775..3787Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig16486 3776..3787 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16486.4674.1

>prot_Ecto-sp13_S_contig16486.4674.1 ID=prot_Ecto-sp13_S_contig16486.4674.1|Name=mRNA_Ecto-sp13_S_contig16486.4674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=251bp
MPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSGRWEIQFKGAGL
TPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDV
FYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALR
LQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGF
THGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPE
V
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mRNA from alignment at Ecto-sp13_S_contig16486:410..3787-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16486.4674.1 ID=mRNA_Ecto-sp13_S_contig16486.4674.1|Name=mRNA_Ecto-sp13_S_contig16486.4674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3378bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16486:410..3787- (Ectocarpus species13 EcNAP12_S_4_19m)
GGAAACAAGCTGATGCCCGGCGCACAGCCTCACGCCCACGCCTACTGTGG GCACCAGTTCGGGTCCTTTGCGGGTCAGCTGGGCGACGGGGCGGCGATGT ATCTGGGCGAGGTAGAGGGACCCTCTGGGAGGTGGGTATTGTTGGGAGCG GAGAGATGGGCGACCCCCTGGACCGATTTTCAAAGCTCGAATGGCCCGTA ACCAAACTTGTGCCAAATTTCAAGAAAATAGTTGCTATGGAAACGCCTGG TCAAGTATTTGCCGTAGGCGTATCGGGCTCTTTCCAACAGCATGTCGGTT GTGGAGCAATCGAGCTTTTTGCAAGTCGGTCAAGGGGGAGTGCTTTTCAC GGTGTTCGGGTTGGGTTGCGCGGCACGCGGAGGGGATCGAGGGGCGCTCT CTTTCCTTATCTGTGGACACATTTCGTCTGTTGACCGCGCGCATTTTCAA GGTGCACAGTTTGGGCAGTGATTTGTCGATTGGGGCAGTGTCCCCCGTAC GAGGGCTTCACGCACGACGTTTGAGTGCCCTTGAGTTTGATGTTGGACCC GCGTGAAGGCGAGGAGTGTGGGCGGAAGACTTGTAGCGCTGTTCTTGCTG GGGAAGCAGGGGAATGGTGATGCCGCTGATTTGCAGTTTTTTTTGTATCG CACAATTTTGCACAAGCAGAATTTGATGAAGCGCTTGTGATGGGCGATGG AGGTGCTCCAACAGTTTTAGTGCAGCCGCAGAAACACCGGTGGTAGAGTT ATGCATCGTGCAACGAAGCGGCTGACCGTTTCTTATTTTTCGAAGCACGC CCTCTCTCTATCGAAACATGGCCAGGATGGCAAAACGGGTACTCGTAGAA GGGGAGATCTTTCCATGGCAACGAGAATTCGTCGGAGACTGCAGCGGCAA AAGACATCTCTCGATTTCACTCCCATGCCCCCCCCCTCCCCCCGTATCAC AACCTCACAGCAGCTCTTCATTGCAAGCAGTGTTCGTGAGGCTAGGCAGG GCCACGAGCGTGACGAGAGTGGAACCACTTTGACCCCCCCGGTGCGCCTA CACGTTACGTCGGAACTCGACTCCATCTTATTTTTTGCCACTACCGCGCG CTGCCTAAACAGGTGGGAGATTCAGTTCAAGGGCGCCGGGCTTACCCCGT ACAGCAGAAGTGCGGACGGTCGAAAGGTGTGCCAGTTTTTTGCGACACAC ACGCCTTTTCACAGGGACACCCTCGTCGATCCCAGGGCTTGCCAATCGCT GGGTGGGCTGTACGTAGGAAGGGAGTGCAATTTTTGGGGGTGCCTCTCTC CCAGCTTTGTGCCGCGAGGGTTAACCCGGGAGACCAATTTCTCGGAGGCG GTACATGTCCTCGGTCTATATTCGAGGGTGTGCACACCGTGTTGCTTCTT TGGTTCTCATCGACCGCGCTACATCCGGTTGACCAATGAAAAGACGTCAG CCTTTGCGGGGGGCAGAATACACCTAGGATAGTTTGTAGGTCACACACAC ATGACCGTGGGTTTGTCGGGTCACTCTTTGTTCGACGTTCCCCTGCCAAA GGGCCCGCAGCCGCAGCGAATGGCCTAGAAGGGCGGCGAATGGCCTAATA GCAAATGTTCGATTTCCGCGTCATTTTGGCGGCGTTTTTCGCCCCTTCCA CACACACCCTCCGGCTGCTGGCTATCTTCTGGCACTCGCCCCTTCCCTGA CTCTCGCCCTCAGGTCCTCCGATCGTCCATCAGGGAGTTCCTGTGTTCGG AGGCGATGCACTTTCTTGGCATCCCCACGACGAGGGCTGCGGCCCTGGTG ACCAGCGATACCAAGGTCCGGCGGGACGTTTTCTACACGGGCAACGTCAT CCAGGAGCGAGCGTCGGTGGGTTGTCTTTGAAAGCAGAGGAGCCGCACGC GTACGGGGGCACGTACAGGGGGGGGGGGGGGGGGGGGAGGTACTCGTTTG TTGATGGATGGTGTTCCGGCGTTTATTGACTGATGGCTACGCGCCAGAGC GCGCAACCCGGTCGAAGTGATTAATTCTTACATGTGCACGTGGGCACGCA ACACAACCGGTCCCGCACATAGACTGTACTCACTGCTACCGCTGGTTGTG TGTGTGTATGAGCTTCTCATCGACCTCTGTACCCTGCTATCAATAACCAC ACGTCAGTCTTTGTACCGGAGAACATTAAACGCGAACGTAGTCCGCGCCC CCTCCTCCCTGTTGCAAGCACCTGTCAAAGGCCTTATTTTTGGTGCAAAA AATCGTGTGCTTCTTCTGCGTCGGCATCGATCCGCGGAACGGTTCCGGAA CCCCATACATAGATCGTGACGAGGCTGGCGCCGACGTTCCTGCGGTTCGG ATCGTTCGAGATCTTCAAGCCCAGGGACCCGCGCACGGGCAGGGACGGCC CCAGCGCCGGCAATGACGCCCTCCGCCTACAGATGCTCGAGTACGCCATC GGCCGCTTCTTCCCGGGCGCGGCGGCCGCCGGTCCCGAGGGGTCGAAGGC GCGCTACCTCGCCATGTGAGCCAAAGGGCGTTGTGTGCTGCACGTGCGTT GTGTGGTCGTCCTTCTGTTTTACTCCTGGCGCCCGCCATTGTTGTTGTGG TCTTCGCGTTTAGTAACCGTGATGATGTCTATTTCCAGTACCTCCCTGTG TCCGTACACTTGACGCGGGAGATCCGGCTGCTCGATGGCATTACGCTACC TTGGTCGTGGTCGGACAGGAGCTACGGTCTGCTGGGACCCCCCCCCCAAA AGGAGGTGCACGGGAGAACTGGGGAGAAGGACCTCCTCCCGTGGTCGGAG TACGTGTAGTGTAGGAAAGAGCATGTCACGCAGCACCACAACTACCACTC CACCAAATGCCGGCAGACCAATCATCGATCGCGTGTTCCATGTCCCAAAC GTCCGTCACCGGCTTCAAGGTTAAATGGACACAAAATGGAAATGACTCTC ACGAACGTGACACGACGCATGCGTATCGGTTAACAACTTATCCGAAGTAA AGGAAAATAACGTGAAAACTGAGACGTGCGCCACGCCAATCACACAAAAT TTAATCGCAACACAGCTGTGGCGATGGTGGTGATCCACGACAGACGGCCC AGACACGTCGACCTATATCGTGCCGTCCCCCCCTGACGATGGAGGCCTCC TTTTTCTCCCGCAGGTACGAGGAGGCCGTCCGTAGCACGGCGGAGCTAGT GGCCAAGTGGCAGTGCGTCGGCTTCACCCACGGGGTTCTGAACACGGACA ACATGTCCGTCCTCGGCCTCACCATCGACTACGGGCCGTACGGCTTCATG GACTTCTTCGACCCGAAGTTCGTGCCCAACGGGTCGGATGGCGGGGGGAG GTACTCCTACGAGAGACAACCGGAGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16486:410..3787-

>mRNA_Ecto-sp13_S_contig16486.4674.1 ID=mRNA_Ecto-sp13_S_contig16486.4674.1|Name=mRNA_Ecto-sp13_S_contig16486.4674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=753bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16486:410..3787- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCCGGCGCACAGCCTCACGCCCACGCCTACTGTGGGCACCAGTTCGG
GTCCTTTGCGGGTCAGCTGGGCGACGGGGCGGCGATGTATCTGGGCGAGG
TAGAGGGACCCTCTGGGAGGTGGGAGATTCAGTTCAAGGGCGCCGGGCTT
ACCCCGTACAGCAGAAGTGCGGACGGTCGAAAGGTCCTCCGATCGTCCAT
CAGGGAGTTCCTGTGTTCGGAGGCGATGCACTTTCTTGGCATCCCCACGA
CGAGGGCTGCGGCCCTGGTGACCAGCGATACCAAGGTCCGGCGGGACGTT
TTCTACACGGGCAACGTCATCCAGGAGCGAGCGTCGATCGTGACGAGGCT
GGCGCCGACGTTCCTGCGGTTCGGATCGTTCGAGATCTTCAAGCCCAGGG
ACCCGCGCACGGGCAGGGACGGCCCCAGCGCCGGCAATGACGCCCTCCGC
CTACAGATGCTCGAGTACGCCATCGGCCGCTTCTTCCCGGGCGCGGCGGC
CGCCGGTCCCGAGGGGTCGAAGGCGCGCTACCTCGCCATGTACGAGGAGG
CCGTCCGTAGCACGGCGGAGCTAGTGGCCAAGTGGCAGTGCGTCGGCTTC
ACCCACGGGGTTCTGAACACGGACAACATGTCCGTCCTCGGCCTCACCAT
CGACTACGGGCCGTACGGCTTCATGGACTTCTTCGACCCGAAGTTCGTGC
CCAACGGGTCGGATGGCGGGGGGAGGTACTCCTACGAGAGACAACCGGAG
GTG
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