mRNA_Ecto-sp13_S_contig16486.4674.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: A0A6H5JV32_9PHAE (Selenoprotein O n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV32_9PHAE) HSP 1 Score: 517 bits (1332), Expect = 1.180e-178 Identity = 252/255 (98.82%), Postives = 255/255 (100.00%), Query Frame = 1
Query: 1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSGRWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSGRWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGP+GSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMS+LGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPE+
Sbjct: 177 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSGRWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPKGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSILGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEM 431
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: A0A836CN66_9STRA (Selenoprotein O n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN66_9STRA) HSP 1 Score: 387 bits (995), Expect = 4.270e-129 Identity = 193/258 (74.81%), Postives = 213/258 (82.56%), Query Frame = 1
Query: 1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSG-RWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFP--GAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
GNKL PGA PHAH YCGHQFGSF+GQLGDGAAMYLGEV G RWE+QFKGAG TPYSR DGRKVLRSSIREFLCSEAMH+LGIPTTRAA++VTSDT V+RD+FYTG+VI ERA+IV R+APTFLRFGSFEIFK DP TGR GPS GN L +ML Y++ FFP AAAAGP G A L MYE+ V+ TAEL A WQCVGFTHGVLNTDNMS+LGLTIDYGPYGFM+ FD +VPNGSDG GRY Y+ QPE+
Sbjct: 79 GNKLFPGASPHAHCYCGHQFGSFSGQLGDGAAMYLGEVVNERGERWEMQFKGAGPTPYSRRGDGRKVLRSSIREFLCSEAMHYLGIPTTRAASMVTSDTLVQRDLFYTGDVINERATIVLRIAPTFLRFGSFEIFKGTDPTTGRRGPSEGNVDLLKKMLHYSLSTFFPEAAAAAAGPGGLPAGTLMMYEDVVKRTAELAAAWQCVGFTHGVLNTDNMSLLGLTIDYGPYGFMEHFDRDYVPNGSDGTGRYRYQDQPEI 336
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: A0A7S2V3H2_9STRA (Selenoprotein O n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3H2_9STRA) HSP 1 Score: 381 bits (978), Expect = 1.280e-125 Identity = 186/256 (72.66%), Postives = 209/256 (81.64%), Query Frame = 1
Query: 1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSG-RWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
GNKL+PGA P AH YCGHQFG+FAGQLGDGA MYLGEV RWEIQFKGAG TPYSR ADGRKVLRSSIREFLCSEA HFLGIPTTRA LVTS+TKV RDV+YTGN I E+ASIV R+AP+FLRFGSFEIFKP D TGR GPS GN AL Q+L++AI ++FP AAA S Y AMY+E V+ TA LVA WQC GFTHGVLNTDNMS+LGLTIDYGP+GFM+++DP +VPNGSD GRYSY +QP++
Sbjct: 136 GNKLLPGADPAAHCYCGHQFGTFAGQLGDGATMYLGEVINQKNERWEIQFKGAGKTPYSRRADGRKVLRSSIREFLCSEANHFLGIPTTRAGTLVTSNTKVVRDVYYTGNPILEKASIVLRIAPSFLRFGSFEIFKPSDALTGRKGPSVGNTALLHQLLDFAIAQYFPEVAAAHAPASVESYAAMYKEVVQKTARLVALWQCTGFTHGVLNTDNMSILGLTIDYGPFGFMEYYDPNYVPNGSDNAGRYSYTKQPDI 391
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: A0A2B4RRY1_STYPI (Selenoprotein O n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4RRY1_STYPI) HSP 1 Score: 366 bits (939), Expect = 3.010e-120 Identity = 177/256 (69.14%), Postives = 203/256 (79.30%), Query Frame = 1
Query: 1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSG-RWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
GNK++PGA+P AH YCGHQFG F+GQLGDGA MYLGEV G RWE+QFKGAGLTPYSR ADGRKVLRSSIREFLCSEAMHFLGIPTTRA + VTSDT++ RD+FY GN I+ER +I+ R+APTF+RFGSFEIFKP DP TGR GPS G + +Q+L+Y + FFP E + YLA ++E VR TA LVA WQCVGF HGVLNTDNMSVLGLTIDYGP+GFMD +DP+ V N SD GRY YE QPE+
Sbjct: 91 GNKILPGAEPSAHCYCGHQFGYFSGQLGDGATMYLGEVVNERGERWEMQFKGAGLTPYSRQADGRKVLRSSIREFLCSEAMHFLGIPTTRAGSCVTSDTRITRDIFYDGNPIRERCTIILRIAPTFIRFGSFEIFKPTDPMTGRKGPSEGRTDILIQLLDYTVQTFFPQVVTGDKEEA---YLAFFKEVVRLTARLVALWQCVGFCHGVLNTDNMSVLGLTIDYGPFGFMDHYDPEHVCNASDDQGRYRYEAQPEI 343
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: UPI001CF1ED27 (protein adenylyltransferase SelO, mitochondrial-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF1ED27) HSP 1 Score: 357 bits (915), Expect = 8.450e-120 Identity = 169/256 (66.02%), Postives = 201/256 (78.52%), Query Frame = 1
Query: 1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEV-EGPSGRWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
GNK++PGA+P AH YCGHQFG F+GQLGDGA MYLGEV RWEIQFKGAGLTP+SR ADGRKVLRSSIREFLCSEAMHFLG+PTTRA + VTSD+K+ RD+FY GN I+E+ ++V R+APTF+RFGSFEIFKP D TGR GPSAG + +Q+L+Y + FFP E + YL ++E R TA+LVA WQCVGF HGVLNTDNMS+LGLTIDYGP+GF+D++DP V N SD GRY +E QPE+
Sbjct: 130 GNKILPGAEPAAHCYCGHQFGYFSGQLGDGATMYLGEVVNNKDQRWEIQFKGAGLTPFSRQADGRKVLRSSIREFLCSEAMHFLGVPTTRAGSCVTSDSKIIRDIFYNGNAIREKCTVVLRIAPTFIRFGSFEIFKPVDSMTGRRGPSAGRTDIMVQLLDYTVNTFFPEVITGNKEDT---YLGFFKEVARRTAKLVAMWQCVGFCHGVLNTDNMSILGLTIDYGPFGFLDYYDPNHVCNASDDHGRYRFEAQPEI 382
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: A0A2P4SK90_BAMTH (Selenoprotein O (Fragment) n=5 Tax=Neognathae TaxID=8825 RepID=A0A2P4SK90_BAMTH) HSP 1 Score: 357 bits (915), Expect = 8.060e-119 Identity = 170/256 (66.41%), Postives = 204/256 (79.69%), Query Frame = 1
Query: 1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSG-RWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
GN+L PG++P AH YCGHQFGSFAGQLGDGAA+YLGEV GP G RWE+Q KGAG+TP+SR ADGRKVLRSSIREFLCSEAM LGIPTTRA VTSD++V RD+FY GN +ER ++V R+APTF+RFGSFEIFKP D TGR GPS + +R+QML+Y IG F+P A + S R A ++E + TA LVA+WQCVGF HGVLNTDNMS++GLTIDYGP+GFMD +DP+ + NGSD GRY+Y +QPE+
Sbjct: 106 GNRLPPGSEPAAHCYCGHQFGSFAGQLGDGAAIYLGEVRGPRGARWELQLKGAGITPFSRQADGRKVLRSSIREFLCSEAMFHLGIPTTRAGTCVTSDSEVVRDIFYDGNPKKERCTVVLRIAPTFIRFGSFEIFKPPDEYTGRKGPSVNRNDIRIQMLDYVIGTFYPEIQEAHADNSIQRNAAFFKEITKRTARLVAEWQCVGFCHGVLNTDNMSIVGLTIDYGPFGFMDRYDPEHICNGSDNTGRYAYNKQPEI 361
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: A0A7L2HGW7_SAGSE (Selenoprotein O (Fragment) n=1 Tax=Sagittarius serpentarius TaxID=56258 RepID=A0A7L2HGW7_SAGSE) HSP 1 Score: 353 bits (906), Expect = 1.610e-118 Identity = 172/256 (67.19%), Postives = 201/256 (78.52%), Query Frame = 1
Query: 1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSG-RWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
GN+L+ G++P AH YCGHQFGSFAGQLGDGAAMYLGEV GP G RWEIQ KGAGLTP+SR ADGRKVLRSSIREFLCSEAM LGIPTTRA VTSD+KV RDVFY GN ER ++V R+A TF+RFGSFEIFKP D TGR GPS + +R+QML+Y I F+P A + S R A ++E + TA LVA+WQCVGF HGVLNTDNMS++GLTIDYGP+GFMD +DP+ + NGSD GRY+Y +QPE+
Sbjct: 29 GNRLLAGSEPAAHCYCGHQFGSFAGQLGDGAAMYLGEVLGPRGERWEIQLKGAGLTPFSRQADGRKVLRSSIREFLCSEAMFHLGIPTTRAGTCVTSDSKVVRDVFYDGNPKSERCTVVLRIASTFIRFGSFEIFKPTDEYTGRKGPSVNRNDIRIQMLDYVISTFYPEIQEAYSDNSIQRNAAFFKEITKRTARLVAEWQCVGFCHGVLNTDNMSIVGLTIDYGPFGFMDRYDPEHICNGSDNTGRYAYNKQPEI 284
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: A0A7K7W461_9AVES (Selenoprotein O (Fragment) n=7 Tax=Aves TaxID=8782 RepID=A0A7K7W461_9AVES) HSP 1 Score: 358 bits (918), Expect = 3.270e-118 Identity = 172/256 (67.19%), Postives = 202/256 (78.91%), Query Frame = 1
Query: 1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSG-RWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
GN+L+PG++P AH YCGHQFGSFAGQLGDGAAMYLGEV GP G RWE+Q KGAGLTP+SR ADGRKVLRSSIREFLCSEAM LGIPTTRA VTSD+KV RD+FY GN ER ++V R+A TFLRFGSFEIFKP D TGR GPS + +R+QML+Y IG F+P + S R A ++E + TA LVA+WQCVGF HGVLNTDNMS++GLTIDYGP+GFMD +DP+ + NGSD GRY+Y +QPE+
Sbjct: 12 GNRLLPGSEPAAHCYCGHQFGSFAGQLGDGAAMYLGEVLGPGGERWELQLKGAGLTPFSRQADGRKVLRSSIREFLCSEAMFHLGIPTTRAGTCVTSDSKVVRDIFYDGNPKNERCTVVLRIASTFLRFGSFEIFKPTDEHTGRKGPSVDRNDIRIQMLDYVIGTFYPDIQETYSDNSIQRNAAFFKEITKRTARLVAEWQCVGFCHGVLNTDNMSIVGLTIDYGPFGFMDRYDPEHICNGSDNTGRYAYNKQPEI 267
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: G3PJI5_GASAC (Selenoprotein O n=1 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3PJI5_GASAC) HSP 1 Score: 357 bits (915), Expect = 4.050e-118 Identity = 175/267 (65.54%), Postives = 202/267 (75.66%), Query Frame = 1
Query: 1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEV------------EGPSGRWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
G+++MPG++P AH YCGHQFG FAGQLGDGAA YLGEV E PSGRWE+Q KGAGLTPYSR ADGRKVLRSSIREFLCSE MHFLG+PTTRAA +VTSDT+V RDV+Y+GN ER S V R+APTFLRFGSFEIFK D TGR GPS G D +R QM++Y I F+P P+ + R +A + E R TA +VA+WQCVGF HGVLNTDNMS+LGLT+DYGPYGFMD FDP F+ N SD GRYSY+ QP +
Sbjct: 72 GSRIMPGSEPAAHCYCGHQFGQFAGQLGDGAACYLGEVKVPPGQDPELLRENPSGRWEMQVKGAGLTPYSRQADGRKVLRSSIREFLCSEVMHFLGVPTTRAACVVTSDTRVVRDVYYSGNPRNERCSAVVRIAPTFLRFGSFEIFKQADEHTGRQGPSYGRDEIRGQMMDYVIEMFYPDIQRDHPDRVE-RNVAFFREVTRRTARVVAQWQCVGFCHGVLNTDNMSILGLTLDYGPYGFMDRFDPDFICNASDNSGRYSYQAQPAI 337
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Match: G3PJH3_GASAC (Selenoprotein O n=1 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3PJH3_GASAC) HSP 1 Score: 357 bits (915), Expect = 8.500e-118 Identity = 175/267 (65.54%), Postives = 202/267 (75.66%), Query Frame = 1
Query: 1 GNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEV------------EGPSGRWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSVLGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEV 765
G+++MPG++P AH YCGHQFG FAGQLGDGAA YLGEV E PSGRWE+Q KGAGLTPYSR ADGRKVLRSSIREFLCSE MHFLG+PTTRAA +VTSDT+V RDV+Y+GN ER S V R+APTFLRFGSFEIFK D TGR GPS G D +R QM++Y I F+P P+ + R +A + E R TA +VA+WQCVGF HGVLNTDNMS+LGLT+DYGPYGFMD FDP F+ N SD GRYSY+ QP +
Sbjct: 84 GSRIMPGSEPAAHCYCGHQFGQFAGQLGDGAACYLGEVKVPPGQDPELLRENPSGRWEMQVKGAGLTPYSRQADGRKVLRSSIREFLCSEVMHFLGVPTTRAACVVTSDTRVVRDVYYSGNPRNERCSAVVRIAPTFLRFGSFEIFKQADEHTGRQGPSYGRDEIRGQMMDYVIEMFYPDIQRDHPDRVE-RNVAFFREVTRRTARVVAQWQCVGFCHGVLNTDNMSILGLTLDYGPYGFMDRFDPDFICNASDNSGRYSYQAQPAI 349 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16486.4674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16486.4674.1 >prot_Ecto-sp13_S_contig16486.4674.1 ID=prot_Ecto-sp13_S_contig16486.4674.1|Name=mRNA_Ecto-sp13_S_contig16486.4674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=251bp MPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSGRWEIQFKGAGLback to top mRNA from alignment at Ecto-sp13_S_contig16486:410..3787- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16486.4674.1 ID=mRNA_Ecto-sp13_S_contig16486.4674.1|Name=mRNA_Ecto-sp13_S_contig16486.4674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3378bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16486:410..3787- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16486:410..3787- >mRNA_Ecto-sp13_S_contig16486.4674.1 ID=mRNA_Ecto-sp13_S_contig16486.4674.1|Name=mRNA_Ecto-sp13_S_contig16486.4674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=753bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16486:410..3787- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |