mRNA_Ecto-sp13_S_contig1646.4657.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1646.4657.1 vs. uniprot
Match: A0A6H5KTD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD7_9PHAE) HSP 1 Score: 143 bits (360), Expect = 4.980e-40 Identity = 78/85 (91.76%), Postives = 81/85 (95.29%), Query Frame = 1
Query: 4 VVRTLLIEGADPDSFDSKGRTPLYLACLLGKVAVARALLAAGANVSLRVLKEPKDAPLDAAATEGHAEVMRLLVERGAVVTAVDS 258
VVRTLLIEGADPDSFDS GRTPLYLACLLGKVAVARALLAAGA+VS RV+KEPKDAPLDAAATEGHAEVMRLLVERGAV AVD+
Sbjct: 66 VVRTLLIEGADPDSFDSNGRTPLYLACLLGKVAVARALLAAGAHVS-RVVKEPKDAPLDAAATEGHAEVMRLLVERGAVEPAVDA 149
BLAST of mRNA_Ecto-sp13_S_contig1646.4657.1 vs. uniprot
Match: D8LTQ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ8_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 7.280e-17 Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 1
Query: 130 ANVSLRVLKEPKDAPLDAAATEGHAEVMRLLVERGAVVTAVDSKGRTALHFA 285
ANVSLRVLKE K APLD AA +GHAE MRLLVERGAVVTAVDSKGRTALHFA
Sbjct: 157 ANVSLRVLKEAKYAPLDVAAAQGHAEGMRLLVERGAVVTAVDSKGRTALHFA 208
BLAST of mRNA_Ecto-sp13_S_contig1646.4657.1 vs. uniprot
Match: A0A812ICP3_9DINO (Kidins220 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812ICP3_9DINO) HSP 1 Score: 64.7 bits (156), Expect = 2.010e-9 Identity = 37/77 (48.05%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 7 VRTLLIEGADPDSFDSKGRTPLYLACLLGKVAVARALLAAGANVSLRVLKEPKDAPLDAAATEGHAEVMRLLVERGA 237
VRTLL + DPD D++GRT LYLA G + + LL A A+ +L V + PL AAAT GH E RLL+ GA
Sbjct: 102 VRTLLEKPQDPDGEDARGRTALYLAAHTGNEGITKLLLEAAADANLTVKDRGETPPLLAAATTGHVEAARLLINSGA 178
BLAST of mRNA_Ecto-sp13_S_contig1646.4657.1 vs. uniprot
Match: A0A7X3XUE7_9BACT (Uncharacterized protein n=3 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3XUE7_9BACT) HSP 1 Score: 59.3 bits (142), Expect = 1.820e-7 Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 1
Query: 7 VRTLLIEGADPDSFDSKGRTPLYLACLLGKVAVARALLAAGANVSLRVLKEPKDAPLDAAATEGHAEVMRLLVERGAVVTAVDSKGRTALHFA 285
VR LL +GAD ++ S G T L+ A +A+A+ALL AGA + PL A+ GHAEV RL++E GA + S G TA+HFA
Sbjct: 60 VRALLRQGADVNTAQSDGMTALHWAASNNDIAIAKALLYAGATYRATT-RIGGYTPLHLASRGGHAEVARLILEDGADPDILTSTGVTAMHFA 151
BLAST of mRNA_Ecto-sp13_S_contig1646.4657.1 vs. uniprot
Match: A0A7S3UV44_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV44_HETAK) HSP 1 Score: 57.8 bits (138), Expect = 5.210e-7 Identity = 42/102 (41.18%), Postives = 53/102 (51.96%), Query Frame = 1
Query: 4 VVRTLLIEGADPDSFDSKGRTPLYLACLLGKVAVARALLAAGANVS----------LRVLKEPKDAPLDAAATEGHAEVMRLLVERGAVVTAVDSKGRTALH 279
VV LL GADP+ +S TPL C G +AR L+ AGA V L+ P APL AA G AE++RLL++RGA ++ G TALH
Sbjct: 184 VVEELLAAGADPNVENSLTWTPLLECCHRGFTHLARVLVDAGARVDHLPDAEVCARAPFLRAPPQAPLAEAARVGAAEIVRLLLDRGADKDRTNALGWTALH 285
BLAST of mRNA_Ecto-sp13_S_contig1646.4657.1 vs. uniprot
Match: A0A8H6FEC1_9LECA (ZZ-type domain-containing protein n=1 Tax=Letharia lupina TaxID=560253 RepID=A0A8H6FEC1_9LECA) HSP 1 Score: 57.8 bits (138), Expect = 6.420e-7 Identity = 36/90 (40.00%), Postives = 51/90 (56.67%), Query Frame = 1
Query: 16 LLIEGADPDSFDSKGRTPLYLACLLGKVAVARALLAAGANVSLRVLKEPKDAPLDAAATEGHAEVMRLLVERGAVVTAVDSKGRTALHFA 285
LL + D D D +G+TPL+ A LGK + R LL GANV PL +A + + ++ L+E GA V A++SKG TAL++A
Sbjct: 183 LLQQQVDVDRPDEEGKTPLFHASTLGKAFIVRRLLDTGANVHCTA---GSVTPLHVSAEKNYTSIVDYLLEAGADVNALNSKGNTALYWA 269
BLAST of mRNA_Ecto-sp13_S_contig1646.4657.1 vs. uniprot
Match: A0L850_MAGMM (Ankyrin repeat-like protein n=1 Tax=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) TaxID=156889 RepID=A0L850_MAGMM) HSP 1 Score: 57.0 bits (136), Expect = 1.230e-6 Identity = 38/95 (40.00%), Postives = 53/95 (55.79%), Query Frame = 1
Query: 4 VVRTLLIEGADPDSFDSKGRTPLYLACLLGKVAVARALLAAG-ANVSLRVLKEPKDAPLDAAATEGHAEVMRLLVERGAVVTAVDSKGRTALHFA 285
+V+ LL GAD D G TPL+ A + ++A A ALL +G +V R E L+ A +GH E+++LL+E+GA T D G T LH A
Sbjct: 902 MVKLLLAVGADATLADEFGNTPLHNAAINNELACAEALLGSGKGDVDARA--EHILTALNMAVIQGHVEMVKLLLEKGADATLADEDGNTPLHVA 994
BLAST of mRNA_Ecto-sp13_S_contig1646.4657.1 vs. uniprot
Match: A0A8K1CNB4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNB4_PYTOL) HSP 1 Score: 56.6 bits (135), Expect = 1.690e-6 Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = 1
Query: 4 VVRTLLIEGADPDSFDSKGRTPLYLACLLGKVAVARALLAAGANVSLRVLKEPKDAPLDAAATEGHAEVMRLLVERGAVVTAVDSKGRTALHFA 285
+V LL GAD ++ +G T LYLA G V++ + L+ AGA V V E + PL AA HA+V+ LL++RGAV+ +S +TALH+A
Sbjct: 54 IVAFLLACGADTEAH-KEGPTALYLAATRGYVSIIKRLVDAGATVDTTVT-EKQVTPLLAATMFRHADVVELLLDRGAVLDRQNSDLQTALHWA 145
BLAST of mRNA_Ecto-sp13_S_contig1646.4657.1 vs. uniprot
Match: A0A6I6AIJ7_9PLAN (Ankyrin repeat domain-containing protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AIJ7_9PLAN) HSP 1 Score: 55.5 bits (132), Expect = 1.980e-6 Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 4 VVRTLLIEGADPDSFDSKGRTPLYLACLLGKVAVARALLAAGANVSLRVLKEPKD-APLDAAATEGHAEVMRLLVERGAVVTAVDSKGRTALHFA 285
+V+ L+ GAD + + TP+Y A G + R L+ G SL E K+ PL AA EG E+ RLL+E GA + ++DSKGRT L A
Sbjct: 96 IVKLLVESGADINHL-CRCYTPIYGAVCSGNPEIVRYLIQRGVTKSLNYKCEWKENTPLQRAAYEGLIEIARLLIEAGADINSIDSKGRTPLDLA 189
BLAST of mRNA_Ecto-sp13_S_contig1646.4657.1 vs. uniprot
Match: I0IFW9_PHYMF (Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) TaxID=1142394 RepID=I0IFW9_PHYMF) HSP 1 Score: 54.7 bits (130), Expect = 2.070e-6 Identity = 43/102 (42.16%), Postives = 54/102 (52.94%), Query Frame = 1
Query: 7 VRTLLIEGADPDSFDSK------GRTPLYLA---CLLGKVAVARALLAAGANVSLRVLKEPKDAPLDAAATEGHAEVMRLLVERGAVVTAVDSKGRTALHFA 285
VRTLL G PD + K G TPL+ A L G + VA LLAAGA V+ R E PL AA+ GH ++++ L+E GA T D +GRT A
Sbjct: 33 VRTLLDSGVSPDLPNRKEPNGDGGNTPLWFAVQGALGGGMPVADVLLAAGAEVNGRC--EYGTTPLHMAASWGHLDMVKCLIEHGADPTTPDDEGRTPRQMA 132 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1646.4657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1646.4657.1 >prot_Ecto-sp13_S_contig1646.4657.1 ID=prot_Ecto-sp13_S_contig1646.4657.1|Name=mRNA_Ecto-sp13_S_contig1646.4657.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=146bp LVVRTLLIEGADPDSFDSKGRTPLYLACLLGKVAVARALLAAGANVSLRVback to top mRNA from alignment at Ecto-sp13_S_contig1646:10722..11159- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1646.4657.1 ID=mRNA_Ecto-sp13_S_contig1646.4657.1|Name=mRNA_Ecto-sp13_S_contig1646.4657.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=438bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1646:10722..11159- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1646:10722..11159- >mRNA_Ecto-sp13_S_contig1646.4657.1 ID=mRNA_Ecto-sp13_S_contig1646.4657.1|Name=mRNA_Ecto-sp13_S_contig1646.4657.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=438bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1646:10722..11159- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |