mRNA_Ecto-sp13_S_contig16385.4608.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16385.4608.1 vs. uniprot
Match: D7FZP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZP1_ECTSI) HSP 1 Score: 387 bits (995), Expect = 9.660e-130 Identity = 211/287 (73.52%), Postives = 226/287 (78.75%), Query Frame = 1
Query: 1 QDAPLSAHLPPASSQGGLGANYTYSSVDTRRVGDGEDGVSRKSFGGPTGYEYAPFVDNDSTSYGDASAKGEGGGGVISLTSRHHAAIPISYFCVGFLGSFVANPLNIYIVQTLNAQPSQQNTLFLHGT-----EILHGYSSPSC----LRSVPRLVASPRLFQPKACPLRLLLPCCLHT-----------KIHGESRAR--VVERARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNREAWGWGLTFRQVCLIMSMTPVLVLGPAVIYLWEERSKETKGVKNQ 795
+DA LSAHLPPASSQGG GANYTYSSVDTR +GDGEDG+SRK FGGPTG+EYAPFVDNDSTSYGDASAKGEGGGG ISLTSRHHAAIPISYFCVGFLGSFVANPLNIYIVQTLNAQPSQQNTL + T ++++G+ S C LR P L L L L + + +I G+ A VVERARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNR AWGWGLTFRQVCLIMSM PVLVLGPAV+YLWEERSKETKGVKNQ
Sbjct: 11 EDAALSAHLPPASSQGGRGANYTYSSVDTRGIGDGEDGISRKGFGGPTGHEYAPFVDNDSTSYGDASAKGEGGGGAISLTSRHHAAIPISYFCVGFLGSFVANPLNIYIVQTLNAQPSQQNTLVVLMTVPWSFKLIYGFLSDVCPIRGLRRKPYLAFGYLLSSFCYLVLALTAEVTIQSLSGLLFLATMGQIMGDVMADTLVVERARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNRGAWGWGLTFRQVCLIMSMMPVLVLGPAVVYLWEERSKETKGVKNQ 297
BLAST of mRNA_Ecto-sp13_S_contig16385.4608.1 vs. uniprot
Match: A0A836CBB7_9STRA (Folate-biopterin transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBB7_9STRA) HSP 1 Score: 142 bits (359), Expect = 9.890e-36 Identity = 90/226 (39.82%), Postives = 128/226 (56.64%), Query Frame = 1
Query: 148 YEYAPFVDNDSTSYGDASAKGEGGGGVISLTSRHHAAIPISYFCVGFLGSFVANPLNIYIVQTLNAQPSQQNTLFL-----HGTEILHGYSSPSC----LRSVPRLVAS-----------PRLFQPKACPLRLLLPCCLHTKIHGESRAR--VVERARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNREAWGWGLTFRQVCLIMSMTPVLVLGPAVIYLWE 759
+ Y+P D + ASA G + LT + AIPISY+ +GFLGSF+ PL +++VQ+LNAQP+QQNT+ + ++L+G+ S LR P L +P L +LL +I + A VVERAR E E RGQ+QATCYA+RF G+V+GCL GA+++N+ WGWGL+FRQVCL+ P+++LG + L+E
Sbjct: 17 FPYSPISDLPHHAKQFASAAG------LKLTDASNIAIPISYWLIGFLGSFIGTPLTVFLVQSLNAQPAQQNTIGVLLSIPWSFKLLYGFVSDVLPVGGLRRKPYFALGFALHSACFLLLAALEKPTFSSLAVLLFVATIGQIMADVMADTLVVERARLEDTEQRGQLQATCYAVRFMGSVLGCLMGAVVYNQVQWGWGLSFRQVCLLTGALPLMLLGTTLWTLYE 236
BLAST of mRNA_Ecto-sp13_S_contig16385.4608.1 vs. uniprot
Match: A0A7S2XY88_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY88_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.310e-31 Identity = 90/210 (42.86%), Postives = 117/210 (55.71%), Query Frame = 1
Query: 232 SLTSRHHAAIPISYFCVGFLGSFVANPLNIYIVQTLNAQPSQQNTLFLHGT-----EILHGYSSPSC----LRSVPR------LVASPRLF----QPKACP-LRLLLPCCLHTKIHGESRAR--VVERARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNREAWGWGLTFRQVCLIMSMTPVLVLGPAVIYLWEERSKETKGVKNQ 795
S+ + AIP SY VGFL +F + PL I++V L+AQP QQN + + T ++L+G+ S L P LVAS L Q P L +L+ I G+ A VVER R E E S+GQ QATCYA+RF G+V GCLGG LL+N WGWGLTF QVCL+ + P++VL P +I LWE + + K V Q
Sbjct: 47 SMMDISNLAIPASYLLVGFLDAFFSTPLYIFLVNDLDAQPWQQNAIAILTTLPWTFKLLYGFLSDLVPIGGLHRKPYMMLGYVLVASCYLILASLQNITFPVLAVLMFVETVGLIMGDVMADSLVVERGRTEEEGSKGQAQATCYAVRFGGSVAGCLGGTLLYNSTNWGWGLTFPQVCLVNGVLPLVVLLPLLIPLWERQGSQGKSVPQQ 256
BLAST of mRNA_Ecto-sp13_S_contig16385.4608.1 vs. uniprot
Match: A0A7S1TWA3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWA3_9STRA) HSP 1 Score: 117 bits (292), Expect = 4.200e-26 Identity = 75/217 (34.56%), Postives = 116/217 (53.46%), Query Frame = 1
Query: 193 DASAKGEGGGGVISLTSRHHAAIPISYFCVGFLGSFVANPLNIYIVQTLNAQPSQQNTLFLHGT-----EILHGYSSP----------------SCLRSVPRLVASPRLFQPKACPLRLLLPCCLHTKIHGESRARV--VERARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNREAWGWGLTFRQVCLIMSMTPVLVLGPAVIYLWEERSKE 774
DA+A + +L + +P +YF +G SF+ PL +Y+VQ L+A+P+ QNTL + T ++L G+ S S + +V L+ + L +P L L+ +I + A VER+R E E RGQMQATCYA+RF G+V+G G L++N++AWGWGL+F QVC ++ + P+L + P +WE+ E
Sbjct: 125 DAAALSPPRAKLANLWAPVSLGLPAAYFFIGIATSFITTPLQVYMVQDLDAEPAAQNTLNVLTTLPWSFKLLFGFLSDVQPVFGARRKPYMIIGSLMHAVSFLMLA-ALGEPSMQSLSTLMWVATMGEIMVDVMADTLAVERSRYEPSEGRGQMQATCYALRFFGSVLGAGTGTLVYNKDAWGWGLSFAQVCFVLGVFPLLFVVPFAYMVWEKPLSE 340
BLAST of mRNA_Ecto-sp13_S_contig16385.4608.1 vs. uniprot
Match: A0A7R9U5H3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5H3_9STRA) HSP 1 Score: 116 bits (290), Expect = 7.710e-26 Identity = 80/222 (36.04%), Postives = 115/222 (51.80%), Query Frame = 1
Query: 193 DASAKGEGGGGVISLTSRHHAAIPISYFCVGFLGSFVANPLNIYIVQTLNAQPSQQNTLFL-----HGTEILHGYSSP------------SCLRSVPRLVASPRLF---QPKACPLRLLLPCCLHTKIHGESRAR--VVERARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNREAWGWGLTFRQVCLIMSMTPVLVLGPAVIYLWEERSKETKGVKN 792
+A+AK E + L S A+P++YF +G SF+ PL +Y+V+ L A+P QNT+ + ++L G+ S L S+ VA L P L L +I + A VVERA+ E E +RGQ QATCYA+RF G+V+G G + FN +AWGWGLTF +VCLI+ P+ + P ++WE+ E KG K+
Sbjct: 125 EATAKNEA---QLDLWSIEGLALPMAYFVIGVSVSFITTPLQVYMVEELGAEPEAQNTISILMSLPWSFKLLFGFVSDVNPILGWRRKPYMILGSMAHAVAYLSLALMGTPGIQVLSFLTWVATMGQIMVDVMADTLVVERAKFEPEATRGQTQATCYALRFVGSVLGASSGTVFFNAKAWGWGLTFGEVCLILGALPLFSVVPLAFFVWEKPIHE-KGCKS 342
BLAST of mRNA_Ecto-sp13_S_contig16385.4608.1 vs. uniprot
Match: A0A6V1WMI5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WMI5_HETAK) HSP 1 Score: 105 bits (261), Expect = 4.720e-22 Identity = 72/208 (34.62%), Postives = 108/208 (51.92%), Query Frame = 1
Query: 205 KGEGGGGVISLTSRHH---AAIPISYFCVGFLGSFVANPLNIYIVQTLNAQPSQQNTLFLHGT-----EILHGYSSPSC----LRSVPRLVAS-----------PRLFQPKACPLR--LLLPCCLHTKIHGESRARVVERARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNREAWGWGLTFRQVCLIMSMTPVLVLGPAVIYL 753
K EG G +T H AIP+SYFCVGF +F++ PL Y+V L+A P+QQ+ + + ++ +G+ S +R P + L QP PL L L + + A VVER++ E+++ RG +QA Y IRF G+++G GA+L+NR+ WGWGLT Q+ + + P +VL PA+ YL
Sbjct: 47 KKEGEGDDSWMTDTWHPANVAIPLSYFCVGFALNFLSTPLTYYMVHVLDASPAQQSVVRTMQSLPWSFKLAYGFLSDCVPIRGMRRKPYFILGWTIYLLCHLTLAALIQPSIGPLTSLLFLGTVGYMMADVMTDAIVVERSQHESDDERGTIQAQGYIIRFVGSILGSAMGAVLYNRDTWGWGLTTPQMFALNAFVPFVVLYPAMAYL 254
BLAST of mRNA_Ecto-sp13_S_contig16385.4608.1 vs. uniprot
Match: A0A835Z8G1_9STRA (Biopterin transport-related protein BT1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G1_9STRA) HSP 1 Score: 104 bits (260), Expect = 4.860e-22 Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 1
Query: 256 AIPISYFCVGFLGSFVANPLNIYIVQTLNAQPSQQNTLFLHGT-----EILHGYSSPSC----LRSVPRLVASPRLFQPKACPLRL---------------LLPCCLHTKIHGESRARVVERARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNREAWGWGLTFRQVCLIMSMTPVLVLGPAVIYLWEER 765
A+P SYFCVG SF+ P++ Y+V L A PSQQN + ++++G+ S + +R P +A ++ C L L LL C + A +VER++ E EE+RG MQAT YA RF G+++G + G ++N+E WGWG+T +V L+ + P+LV+ P ++W R
Sbjct: 11 AVPASYFCVGIAMSFLRTPVSYYLVHELGASPSQQNVVVTLAMLPWSFKLVYGFISDNFPIGGMRRKPYFIAGWFIYS--MCNLLLAATGRPGVQSVALLQLLGTCGFMMSDVTTDAIIVERSKNEPEETRGSMQATGYATRFCGSLLGSVLGTCVYNKERWGWGMTIGEVFLLNGLFPLLVVAP---FMWTLR 199
BLAST of mRNA_Ecto-sp13_S_contig16385.4608.1 vs. uniprot
Match: D8LI15_ECTSI (Folate/biopterin transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI15_ECTSI) HSP 1 Score: 73.6 bits (179), Expect = 3.610e-11 Identity = 31/83 (37.35%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 538 VVERARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNREAWGWGLTFRQVCLIMSMTPVLVLGPAVIYLWEERSKETKGV 786
VVE+ + E+ + G +QA+ Y R+ G+ IG +GGA+L+N++ WGWGLT ++ I ++ P++++ P + +L E++ KGV
Sbjct: 245 VVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVMPLMPFLLEDKKPREKGV 327
BLAST of mRNA_Ecto-sp13_S_contig16385.4608.1 vs. uniprot
Match: A0A6H5KNB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNB3_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 8.350e-9 Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 1
Query: 706 MSMTPVLVLGPAVIYLWEERSKETKGVKNQ 795
MSM PVLVLGPA++YLWEERSKETKGVKNQ
Sbjct: 1 MSMMPVLVLGPALVYLWEERSKETKGVKNQ 30
BLAST of mRNA_Ecto-sp13_S_contig16385.4608.1 vs. uniprot
Match: A0A482UNW4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UNW4_9ARCH) HSP 1 Score: 53.1 bits (126), Expect = 2.810e-5 Identity = 22/42 (52.38%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 244 RHHAAIPISYFCVGFLGSFVANPLNIYIVQTLNAQPSQQNTL 369
+ + AI ++YF VG + SF+A P+NIY+V TLNA+P QNT+
Sbjct: 27 KENLAIIMAYFSVGLVSSFLATPMNIYLVNTLNAEPQMQNTI 68 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16385.4608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16385.4608.1 >prot_Ecto-sp13_S_contig16385.4608.1 ID=prot_Ecto-sp13_S_contig16385.4608.1|Name=mRNA_Ecto-sp13_S_contig16385.4608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=265bp QDAPLSAHLPPASSQGGLGANYTYSSVDTRRVGDGEDGVSRKSFGGPTGYback to top mRNA from alignment at Ecto-sp13_S_contig16385:319..3168- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16385.4608.1 ID=mRNA_Ecto-sp13_S_contig16385.4608.1|Name=mRNA_Ecto-sp13_S_contig16385.4608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2850bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16385:319..3168- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16385:319..3168- >mRNA_Ecto-sp13_S_contig16385.4608.1 ID=mRNA_Ecto-sp13_S_contig16385.4608.1|Name=mRNA_Ecto-sp13_S_contig16385.4608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=795bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16385:319..3168- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |