mRNA_Ecto-sp13_S_contig16295.4562.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16295.4562.1 vs. uniprot
Match: D8LJ61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ61_ECTSI) HSP 1 Score: 389 bits (998), Expect = 3.030e-136 Identity = 201/205 (98.05%), Postives = 204/205 (99.51%), Query Frame = 2
Query: 5 LNGGGLLASFSFTRRRPSVVGLIGGIASGKSTVSKALGTACGLEVIDADKLGHESYQPGTRCFGKLVDAFGEKIVAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGKEGAESVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLMERNGFNEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAK 619
LNGGGLLASFSFTRRRPSVVGLIGGIASGKSTVSKALGTACGLEVIDADKLGHESYQPGTRCFGKLVDAFGE IVAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLG+EGAESVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLM+RNGF+EAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAK
Sbjct: 3 LNGGGLLASFSFTRRRPSVVGLIGGIASGKSTVSKALGTACGLEVIDADKLGHESYQPGTRCFGKLVDAFGENIVAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGREGAESVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLMKRNGFDEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAK 207
BLAST of mRNA_Ecto-sp13_S_contig16295.4562.1 vs. uniprot
Match: A0A6H5KRA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRA4_9PHAE) HSP 1 Score: 386 bits (991), Expect = 1.130e-133 Identity = 199/205 (97.07%), Postives = 203/205 (99.02%), Query Frame = 2
Query: 5 LNGGGLLASFSFTRRRPSVVGLIGGIASGKSTVSKALGTACGLEVIDADKLGHESYQPGTRCFGKLVDAFGEKIVAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGKEGAESVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLMERNGFNEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAK 619
LNGGGLLASFSFTRRRPSVVGLIGGIASGKSTVSKALGTACGL VIDADKLGHESYQPGTRCFGKLVDAFGEKI+AGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLG+EGAESVVLEAAVLLEAGWDDLCDELWVVQVPP VARARLM+RNGF+EAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAK
Sbjct: 37 LNGGGLLASFSFTRRRPSVVGLIGGIASGKSTVSKALGTACGLAVIDADKLGHESYQPGTRCFGKLVDAFGEKIIAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGREGAESVVLEAAVLLEAGWDDLCDELWVVQVPPEVARARLMKRNGFDEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAK 241
BLAST of mRNA_Ecto-sp13_S_contig16295.4562.1 vs. uniprot
Match: A0A6B1A9Z4_9CHLR (Dephospho-CoA kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6B1A9Z4_9CHLR) HSP 1 Score: 186 bits (471), Expect = 2.880e-56 Identity = 103/177 (58.19%), Postives = 122/177 (68.93%), Query Frame = 2
Query: 62 VGLIGGIASGKSTVSKALGTACGLEVIDADKLGHESYQPGTRCFGKLVDAFGEKIVAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGKEGAESVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLMERNGFNEAEADKRIASQPMTNQERAARATVVLSNE 592
+GL GGIASGKSTV K L G IDAD LGH++Y+PGT F ++V+AFGE +VA DGTIDR LG VFG+P M RL IVWP IR LAEA ++ L G VLEAAV++EAGW DL DE+WVV V AR RLM RN F+ EADKRI SQ +TN ER A V++SN+
Sbjct: 4 IGLTGGIASGKSTVVKQL-QELGAATIDADLLGHQTYEPGTETFKQVVEAFGEDLVAEDGTIDRSKLGPRVFGHPDGMKRLTDIVWPGIRALAEAELDRLAANGTSVAVLEAAVMIEAGWQDLVDEVWVVAVSRDTARERLMARNNFSAEEADKRIDSQ-ITNDERLKHADVMISND 178
BLAST of mRNA_Ecto-sp13_S_contig16295.4562.1 vs. uniprot
Match: A0A2W1AGZ2_9CHLR (Dephospho-CoA kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W1AGZ2_9CHLR) HSP 1 Score: 185 bits (470), Expect = 6.520e-56 Identity = 102/177 (57.63%), Postives = 121/177 (68.36%), Query Frame = 2
Query: 62 VGLIGGIASGKSTVSKALGTACGLEVIDADKLGHESYQPGTRCFGKLVDAFGEKIVAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGKEGAESVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLMERNGFNEAEADKRIASQPMTNQERAARATVVLSNE 592
+GL GGIASGKSTV+ L G +IDAD+LGH +Y+PGT F ++V AFG IV DGTIDR LG VFG P M RL IVWP I LA + G E V+EAAVL EAGW+ L DE+WV+ VPPAVAR RLM+RNGF+ EADKRI SQ ++N ER ARA VV+S +
Sbjct: 4 IGLTGGIASGKSTVTGTLADL-GATIIDADRLGHRTYEPGTETFAQVVAAFGADIVGEDGTIDRPTLGGKVFGEPGAMTRLTDIVWPGIAALAVEEMAAARAAGVEVAVVEAAVLFEAGWETLVDEVWVISVPPAVARQRLMDRNGFSAEEADKRIGSQ-LSNAEREARADVVISTD 178
BLAST of mRNA_Ecto-sp13_S_contig16295.4562.1 vs. uniprot
Match: A0A4D9CQ82_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQ82_9STRA) HSP 1 Score: 184 bits (468), Expect = 4.020e-55 Identity = 99/187 (52.94%), Postives = 127/187 (67.91%), Query Frame = 2
Query: 50 RPSVVGLIGGIASGKSTVSKALGTACGLEVIDADKLGHESYQPGTRCFGKLVDAFGEKIVAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGKEGAESVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLMERNGFNEAEADKRIASQPMTNQERAARATVVLSNEGTEEDL 610
RP V+G+ GGIASGKS V++ G+ V+DAD LGH SY GT C+ +L+ FGE+IV DG I+RRALG+ VF +P RL+GIVWPEIR L E + LG+ G + V+EAAV+LEAGW+D DE+WVV P VA+ RLM RN + +A +RI +Q MTNQER +A V+ N GT DL
Sbjct: 17 RPLVIGVTGGIASGKSMVTRLCQGRYGVSVLDADILGHRSYAKGTPCYRQLLKTFGEEIVGEDGQINRRALGRIVFSSPQERNRLEGIVWPEIRRLMEEDLRALGETGIHAAVVEAAVMLEAGWEDAMDEVWVVAAEPEVAKTRLMSRNNLSAEDALRRIEAQ-MTNQERIEKADRVIWNNGTVADL 202
BLAST of mRNA_Ecto-sp13_S_contig16295.4562.1 vs. uniprot
Match: A0A2E2YSE9_9GAMM (Dephospho-CoA kinase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E2YSE9_9GAMM) HSP 1 Score: 182 bits (463), Expect = 4.550e-55 Identity = 99/189 (52.38%), Postives = 135/189 (71.43%), Query Frame = 2
Query: 56 SVVGLIGGIASGKSTVSKALGTACGLEVIDADKLGHESYQPGTRCFGKLVDAFGEKIVAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGKEGAE-SVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLMERNGFNEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAK 619
+++GL GGIASGKSTV++ G G VIDADKLGH +Y+PGTR F +V+ FG++I+A DG+IDR+ LG VFG+ + RL GIVWPEIR +AE I E +VVLEAAVLLEAGW+D+ DE+WVV + P VA R M+R+G + R+A+Q ++N ER A+A V++ N G+EE+L+A+
Sbjct: 2 TIIGLTGGIASGKSTVAEITGQR-GAYVIDADKLGHAAYEPGTRAFSAVVEEFGDEILAEDGSIDRKVLGSKVFGSEGGLDRLTGIVWPEIRAMAEEEISTQKIEDPNRTVVLEAAVLLEAGWEDVVDEVWVVVIDPEVAIERAMKRDGVEREAIEARLAAQ-LSNAEREAKADVIIDNSGSEEELLAE 188
BLAST of mRNA_Ecto-sp13_S_contig16295.4562.1 vs. uniprot
Match: A0A2A9HEN9_CHLB2 (Dephospho-CoA kinase n=3 Tax=Chloroflexi TaxID=200795 RepID=A0A2A9HEN9_CHLB2) HSP 1 Score: 182 bits (462), Expect = 8.530e-55 Identity = 101/187 (54.01%), Postives = 126/187 (67.38%), Query Frame = 2
Query: 59 VVGLIGGIASGKSTVSKALGTACGLEVIDADKLGHESYQPGTRCFGKLVDAFGEKIVAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGKEGAESVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLMERNGFNEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAK 619
V+GL GGIASGKSTV+ G+ VIDAD LGH +Y PGT + K+V+ FG+ +VA DGTIDR+ LG VFG P + +L IVWP IR LA ++ G E VVLEAAVLLEAGW+DL DE+WVV V P +A RL RNG + A RIASQ +TN+ER AR V++ N GT ++L A+
Sbjct: 3 VIGLTGGIASGKSTVTSFFRER-GIPVIDADILGHRTYDPGTETYQKVVETFGQDVVAADGTIDRKVLGSKVFGRPEELKKLTDIVWPGIRRLASEQLAEFEAAGNELVVLEAAVLLEAGWEDLVDEIWVVVVDPEIAVQRLAARNGLDPDAARARIASQ-LTNEERIARGDVIIENNGTLDELNAR 187
BLAST of mRNA_Ecto-sp13_S_contig16295.4562.1 vs. uniprot
Match: A0A2D6BU38_9DELT (Dephospho-CoA kinase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BU38_9DELT) HSP 1 Score: 181 bits (460), Expect = 1.660e-54 Identity = 104/185 (56.22%), Postives = 130/185 (70.27%), Query Frame = 2
Query: 59 VVGLIGGIASGKSTVSKALGTACGLEVIDADKLGHESYQPGTRCFGKLVDAFGEKIVAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGKEGAESVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLMERNGFNEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLV 613
V+GL GGIA+GKSTV++ALG G VIDAD+LGH +Y+PG ++ +AFG ++VA DGTIDR+ALG VF P+ + RL IVWPEIR LAEA I AE VVLEAAVLLEAGW+DL DE+WVV V P VA AR ++R G + + A RI +Q ++NQER ARA V+ N G E L+
Sbjct: 10 VIGLTGGIAAGKSTVAQALGER-GAHVIDADRLGHRAYEPGREAHRQVAEAFGAEVVAPDGTIDRKALGAKVFDRPAELERLTAIVWPEIRRLAEAEIAAAR---AEVVVLEAAVLLEAGWEDLVDEIWVVVVEPEVAVARAVDRGGLDASAARARIDAQ-LSNQERKARANRVIDNGGDESALL 189
BLAST of mRNA_Ecto-sp13_S_contig16295.4562.1 vs. uniprot
Match: A0A6L7UXB2_9CHLR (Dephospho-CoA kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7UXB2_9CHLR) HSP 1 Score: 182 bits (461), Expect = 1.800e-54 Identity = 106/193 (54.92%), Postives = 128/193 (66.32%), Query Frame = 2
Query: 47 RRPSV--VGLIGGIASGKSTVSKALGTACGLEVIDADKLGHESYQPGTRCFGKLVDAFGEKIVAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGKEGAESVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLMERNGFNEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAK 619
R P++ +GL GGIASGKSTV L G IDAD LGH++Y+PGT F ++V AFGE +VA DGTIDR LG VFG+P M RL IVWP IR LAE + L EG E VLEAAV++EAGW DL DE+WVV V AR RLM RN F+ EAD+RI SQ +TN ER A V++SN+ + E A+
Sbjct: 18 RNPTMRSIGLTGGIASGKSTVVNQL-RELGAATIDADILGHQTYEPGTETFTQVVAAFGEDLVAEDGTIDRSKLGPKVFGHPDGMKRLTDIVWPGIRALAEVELARLEAEGTEIAVLEAAVMIEAGWQDLVDEVWVVAVSRDTARERLMARNSFSAEEADRRIDSQ-ITNDERLKHADVMISNDCSMEVAAAR 208
BLAST of mRNA_Ecto-sp13_S_contig16295.4562.1 vs. uniprot
Match: A0A7X3R448_9CHLR (Dephospho-CoA kinase n=3 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7X3R448_9CHLR) HSP 1 Score: 181 bits (460), Expect = 2.120e-54 Identity = 105/187 (56.15%), Postives = 124/187 (66.31%), Query Frame = 2
Query: 50 RPSVVGLIGGIASGKSTVSKALGTACGLEVIDADKLGHESYQPGTRCFGKLVDAFGEKIVAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGKEGAESVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLMERNGFNEAEADKRIASQPMTNQERAARATVVLSNEGTEEDL 610
R +GL GGIASGKSTV++ G+ VIDAD LGH +Y PGT F +V AFG IVA DGTIDRRALG VFG P M RL IVWP IR LA + L G +LEAAVLLEAGW+D+ DE+WV V +A ARL ERNG +EA A RI SQ ++N+ER A A+VV+ N GT E+L
Sbjct: 6 RVHTIGLTGGIASGKSTVAEFF-RGRGVPVIDADILGHRTYDPGTGTFAAVVAAFGSDIVADDGTIDRRALGGKVFGKPEMMTRLTDIVWPGIRALASQELSDLEVAGTGIALLEAAVLLEAGWEDMVDEIWVTTVEADIAVARLAERNGLDEAAARARIDSQ-LSNEERIAAASVVIENNGTLEEL 190 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16295.4562.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16295.4562.1 >prot_Ecto-sp13_S_contig16295.4562.1 ID=prot_Ecto-sp13_S_contig16295.4562.1|Name=mRNA_Ecto-sp13_S_contig16295.4562.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp GSQRRRTASVVLVHAPSSIGGRSYRRHCLWQEHRFEGPGHGVRAGGNRRRback to top mRNA from alignment at Ecto-sp13_S_contig16295:1092..3351+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16295.4562.1 ID=mRNA_Ecto-sp13_S_contig16295.4562.1|Name=mRNA_Ecto-sp13_S_contig16295.4562.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2260bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16295:1092..3351+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16295:1092..3351+ >mRNA_Ecto-sp13_S_contig16295.4562.1 ID=mRNA_Ecto-sp13_S_contig16295.4562.1|Name=mRNA_Ecto-sp13_S_contig16295.4562.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=435bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16295:1092..3351+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |