prot_Ecto-sp13_S_contig16263.4540.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16263.4540.1
Unique Nameprot_Ecto-sp13_S_contig16263.4540.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length304
Homology
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A6H5JK39_9PHAE (Cyclin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK39_9PHAE)

HSP 1 Score: 489 bits (1258), Expect = 5.220e-171
Identity = 279/304 (91.78%), Postives = 281/304 (92.43%), Query Frame = 0
Query:    1 MHTRRNTAVQENTGFGMDENAKPSDLSGAAGKAALGGGAKKGLGGVQTRRGLRDITNKAEEAVAEGAGKGGKKPGARVASASVGSADTGAAAPXXXXXXXXXXXXXXXXXXXXXVTQTXXXXXXXXXXSAPASRPIRTASRTPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 304
            MHTRRNTAVQEN GFGMDENAKPSDL  AAGKAALGGGAKKGLGGVQTRRGLRDITNKAEEAVAEGAGKGGKKPGARVASASVGSADTGAAAP        XXXXXXXXXXXXX TQT          SAPASRPIRTASRTPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMA+ALQFRLTVPTIYCFLLRYLK +
Sbjct:    1 MHTRRNTAVQENAGFGMDENAKPSDLGAAAGKAALGGGAKKGLGGVQTRRGLRDITNKAEEAVAEGAGKGGKKPGARVASASVGSADTGAAAPVVPSAASLXXXXXXXXXXXXXXTQTTAPAAPAAISSAPASRPIRTASRTPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMASALQFRLTVPTIYCFLLRYLKAA 304          
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A836CKN2_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN2_9STRA)

HSP 1 Score: 215 bits (548), Expect = 7.530e-64
Identity = 109/167 (65.27%), Postives = 139/167 (83.23%), Query Frame = 0
Query:  139 ASRTPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELE-TVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 304
            ++R+  DID+RD  EPLAVTEYVEDLY +LR +E  T++    ++ Q +V+ RM +IL+DWLVEVHL+F+LVPDTLYLTVY+I +YL L   VTR NLQLVGVTA+LLASKYEEIYPP+IRDLV++TD+AY ++QIL+ME+ M N L+FR+TVPT YCFLLRYLK +
Sbjct:  117 SARSANDIDERDRKEPLAVTEYVEDLYSYLRAQEQVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAA 283          
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A6V2LUR7_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2LUR7_9STRA)

HSP 1 Score: 204 bits (520), Expect = 6.010e-60
Identity = 98/159 (61.64%), Postives = 131/159 (82.39%), Query Frame = 0
Query:  146 IDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 304
            ID+RD D+PL VT+YV+D+Y   REREI T V   YM+ Q ++NERMRSIL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE   V+R  LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY++ +IL+ME  +   L++++T+P+ + FL+RYLK +
Sbjct:  112 IDERDRDDPLCVTDYVQDMYEHFREREIHTSVRPIYMEGQQHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLEKREVSRPKLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYSKQEILDMEEVILKTLEYQITIPSAHAFLVRYLKAA 270          
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: B8BZ02_THAPS (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ02_THAPS)

HSP 1 Score: 201 bits (511), Expect = 9.490e-60
Identity = 98/165 (59.39%), Postives = 132/165 (80.00%), Query Frame = 0
Query:  140 SRTPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 304
            S  P DID+RD+D+PL  T YV+D+Y   R +E+ T V   YM+ Q  +NERMRSIL+DWLVEVHLKFKLVP+TLYLTV +ID+YL    V+R  LQLVGVTA+L+ASKYEEIYPP++RDLV+I DRAY++++ILEME  +  +L++++T+P+ + FL+RYLK +
Sbjct:   12 SGQPDDIDERDSDDPLCATSYVQDMYEHFRGKEVFTSVRPVYMEDQQFINERMRSILVDWLVEVHLKFKLVPETLYLTVNVIDRYLAKTEVSRPKLQLVGVTALLIASKYEEIYPPELRDLVYICDRAYSKNEILEMEEIILKSLEYQITIPSAHAFLVRYLKAA 176          
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: F0XYQ7_AURAN (Cyclin N-terminal domain-containing protein (Fragment) n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0XYQ7_AURAN)

HSP 1 Score: 199 bits (507), Expect = 2.210e-59
Identity = 100/164 (60.98%), Postives = 129/164 (78.66%), Query Frame = 0
Query:  145 DIDQRDADEPLAVTEYVEDL----YVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 304
            D+D RDA  P AVTEYV D+    Y   RE+E+ T V+  YM  Q ++NE+MR+ILIDWLVEVHLKFKLVP+TLYLTV LID+YL    V R NLQLVGV+A+LLASKYEEIYPP+++DLV+ITD+AY ++QIL ME  M  AL++++T+ +I+CF++RYLK  
Sbjct:    1 DVDARDASNPQAVTEYVNDMRAPAYAHFREKELETSVNPTYMSRQAHINEKMRAILIDWLVEVHLKFKLVPETLYLTVNLIDRYLLGSPVERSNLQLVGVSALLLASKYEEIYPPELKDLVYITDKAYTQEQILSMEEKMVKALKYKMTIASIHCFMMRYLKAG 164          
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A1E7FEB9_9STRA (Cyclin_N-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEB9_9STRA)

HSP 1 Score: 199 bits (507), Expect = 2.730e-59
Identity = 96/159 (60.38%), Postives = 130/159 (81.76%), Query Frame = 0
Query:  146 IDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 304
            ID+RDA++PL  TEYV+D+Y   R +E +T V   YMD+Q ++NERMRSIL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE + V+R  LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY R +I+EME  +   L++ +T+P+ + FL+R+LK +
Sbjct:    7 IDERDAEDPLCATEYVQDMYEHFRLKEGSTSVRPLYMDNQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLERQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRTEIIEMEEKILKTLEYNITIPSAHAFLVRFLKAA 165          
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A7S4AAP4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AAP4_9STRA)

HSP 1 Score: 202 bits (515), Expect = 4.130e-59
Identity = 97/159 (61.01%), Postives = 130/159 (81.76%), Query Frame = 0
Query:  146 IDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 304
            ID+RDA++PL  TEYV+D+Y   RE+E  T V   YM++Q ++NERMRSIL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE + V+R  LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY R +I+EME  +   L++ +T+P+ + FL+RYLK +
Sbjct:  120 IDERDAEDPLCATEYVQDMYDHFREKEAITSVRPLYMENQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLERQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRKEIIEMEEQILKTLEYNITIPSAHAFLVRYLKAA 278          
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A7S3Q0F9_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0F9_9STRA)

HSP 1 Score: 201 bits (510), Expect = 1.350e-58
Identity = 97/163 (59.51%), Postives = 131/163 (80.37%), Query Frame = 0
Query:  142 TPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 304
            T  DID+RD ++PL VT YV+D+Y    ++E +T V   YM+ Q N+NERMRSIL+DWLVEVHLKFKLVP+TLYLT+ LID++LE E ++R  LQLVGVT++L+ASKYEEIYPP++RDLV+I D AY+++ ILEME  M   L++R+T+P+ + FL+RYLK +
Sbjct:   96 TVDDIDERDKNDPLCVTSYVQDMYEHFADKEQSTSVRPVYMEDQSNINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRFLEKEDISRPKLQLVGVTSLLIASKYEEIYPPELRDLVYICDHAYSKELILEMEYKMLTTLEYRITIPSAHAFLVRYLKAA 258          
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A7S2PNA7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PNA7_9STRA)

HSP 1 Score: 202 bits (513), Expect = 1.590e-58
Identity = 99/160 (61.88%), Postives = 129/160 (80.62%), Query Frame = 0
Query:  145 DIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 304
            DID+RD D+PL VT YV+D+Y   R +E +T V   YM+ Q  +NERMRSIL+DWLVEVHLKFKLVP+TLYLTV +ID+YL    VTR  LQLVGVTA+L+ASKYEEIYPP++RDLV+I DRAY++++ILEME  +   LQ+++T+P+ + FL+RYLK +
Sbjct:  145 DIDERDTDDPLCVTSYVQDMYEHFRTKEGSTSVRPVYMEDQQYINERMRSILVDWLVEVHLKFKLVPETLYLTVNIIDRYLAKTEVTRPKLQLVGVTALLIASKYEEIYPPELRDLVYICDRAYSKNEILEMEEVVLKKLQYQITIPSAHAFLVRYLKAA 304          
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A448ZSV9_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSV9_9STRA)

HSP 1 Score: 197 bits (502), Expect = 3.840e-57
Identity = 95/159 (59.75%), Postives = 129/159 (81.13%), Query Frame = 0
Query:  146 IDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 304
            ID+RDA++PL  TEYV+D+Y   R +E  T V   YM++Q ++NERMRSIL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE + V+R  LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY R +I+EME  +   L++ +T+P+ + FL+R+LK +
Sbjct:  123 IDERDAEDPLCATEYVQDMYDHFRAKEGITSVRPLYMENQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLERQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRKEIIEMEEQILKTLEYNITIPSAHAFLVRFLKAA 281          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK39_9PHAE5.220e-17191.78Cyclin N-terminal domain-containing protein n=2 Ta... [more]
A0A836CKN2_9STRA7.530e-6465.27Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A6V2LUR7_9STRA6.010e-6061.64Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
B8BZ02_THAPS9.490e-6059.39Cyclin N-terminal domain-containing protein n=1 Ta... [more]
F0XYQ7_AURAN2.210e-5960.98Cyclin N-terminal domain-containing protein (Fragm... [more]
A0A1E7FEB9_9STRA2.730e-5960.38Cyclin_N-domain-containing protein n=1 Tax=Fragila... [more]
A0A7S4AAP4_9STRA4.130e-5961.01Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S3Q0F9_9STRA1.350e-5859.51Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S2PNA7_9STRA1.590e-5861.88Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A448ZSV9_9STRA3.840e-5759.75Cyclin N-terminal domain-containing protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 198..282
e-value: 4.6E-24
score: 95.9
NoneNo IPR availableGENE3D1.10.472.10coord: 177..289
e-value: 1.6E-60
score: 206.3
NoneNo IPR availableGENE3D1.10.472.10coord: 166..302
e-value: 1.6E-60
score: 206.3
NoneNo IPR availablePANTHERPTHR10177:SF371CYCLIN-B1-1coord: 104..302
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 164..288
e-value: 1.4E-43
score: 147.6
IPR006671Cyclin, N-terminalPROSITEPS00292CYCLINScoord: 193..224
IPR039361CyclinPIRSFPIRSF001771Cyclin_A_B_D_Ecoord: 16..144
e-value: 9.4
score: 3.1
coord: 54..304
e-value: 6.4E-82
score: 274.0
IPR039361CyclinPANTHERPTHR10177CYCLINEcoord: 104..302
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 152..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16263contigEcto-sp13_S_contig16263:160..2121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16263.4540.1mRNA_Ecto-sp13_S_contig16263.4540.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16263 160..2121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16263.4540.1 ID=prot_Ecto-sp13_S_contig16263.4540.1|Name=mRNA_Ecto-sp13_S_contig16263.4540.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=304bp
MHTRRNTAVQENTGFGMDENAKPSDLSGAAGKAALGGGAKKGLGGVQTRR
GLRDITNKAEEAVAEGAGKGGKKPGARVASASVGSADTGAAAPAAPAAAP
LAVASSSSSSSSAAVTQTTAPAAPAAVASAPASRPIRTASRTPTDIDQRD
ADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWL
VEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYE
EIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRY
LKVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
IPR039361Cyclin
IPR036915Cyclin-like_sf