mRNA_Ecto-sp13_S_contig16263.4540.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A6H5JK39_9PHAE (Cyclin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK39_9PHAE) HSP 1 Score: 489 bits (1258), Expect = 5.220e-171 Identity = 279/304 (91.78%), Postives = 281/304 (92.43%), Query Frame = 1
Query: 1 MHTRRNTAVQENTGFGMDENAKPSDLSGAAGKAALGGGAKKGLGGVQTRRGLRDITNKAEEAVAEGAGKGGKKPGARVASASVGSADTGAAAPXXXXXXXXXXXXXXXXXXXXXVTQTXXXXXXXXXXSAPASRPIRTASRTPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 912
MHTRRNTAVQEN GFGMDENAKPSDL AAGKAALGGGAKKGLGGVQTRRGLRDITNKAEEAVAEGAGKGGKKPGARVASASVGSADTGAAAP XXXXXXXXXXXXX TQT SAPASRPIRTASRTPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMA+ALQFRLTVPTIYCFLLRYLK +
Sbjct: 1 MHTRRNTAVQENAGFGMDENAKPSDLGAAAGKAALGGGAKKGLGGVQTRRGLRDITNKAEEAVAEGAGKGGKKPGARVASASVGSADTGAAAPVVPSAASLXXXXXXXXXXXXXXTQTTAPAAPAAISSAPASRPIRTASRTPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMASALQFRLTVPTIYCFLLRYLKAA 304
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A836CKN2_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN2_9STRA) HSP 1 Score: 215 bits (548), Expect = 7.530e-64 Identity = 109/167 (65.27%), Postives = 139/167 (83.23%), Query Frame = 1
Query: 415 ASRTPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELE-TVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 912
++R+ DID+RD EPLAVTEYVEDLY +LR +E T++ ++ Q +V+ RM +IL+DWLVEVHL+F+LVPDTLYLTVY+I +YL L VTR NLQLVGVTA+LLASKYEEIYPP+IRDLV++TD+AY ++QIL+ME+ M N L+FR+TVPT YCFLLRYLK +
Sbjct: 117 SARSANDIDERDRKEPLAVTEYVEDLYSYLRAQEQVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAA 283
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A6V2LUR7_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2LUR7_9STRA) HSP 1 Score: 204 bits (520), Expect = 6.010e-60 Identity = 98/159 (61.64%), Postives = 131/159 (82.39%), Query Frame = 1
Query: 436 IDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 912
ID+RD D+PL VT+YV+D+Y REREI T V YM+ Q ++NERMRSIL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE V+R LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY++ +IL+ME + L++++T+P+ + FL+RYLK +
Sbjct: 112 IDERDRDDPLCVTDYVQDMYEHFREREIHTSVRPIYMEGQQHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLEKREVSRPKLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYSKQEILDMEEVILKTLEYQITIPSAHAFLVRYLKAA 270
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: B8BZ02_THAPS (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ02_THAPS) HSP 1 Score: 201 bits (511), Expect = 9.490e-60 Identity = 98/165 (59.39%), Postives = 132/165 (80.00%), Query Frame = 1
Query: 418 SRTPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 912
S P DID+RD+D+PL T YV+D+Y R +E+ T V YM+ Q +NERMRSIL+DWLVEVHLKFKLVP+TLYLTV +ID+YL V+R LQLVGVTA+L+ASKYEEIYPP++RDLV+I DRAY++++ILEME + +L++++T+P+ + FL+RYLK +
Sbjct: 12 SGQPDDIDERDSDDPLCATSYVQDMYEHFRGKEVFTSVRPVYMEDQQFINERMRSILVDWLVEVHLKFKLVPETLYLTVNVIDRYLAKTEVSRPKLQLVGVTALLIASKYEEIYPPELRDLVYICDRAYSKNEILEMEEIILKSLEYQITIPSAHAFLVRYLKAA 176
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: F0XYQ7_AURAN (Cyclin N-terminal domain-containing protein (Fragment) n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0XYQ7_AURAN) HSP 1 Score: 199 bits (507), Expect = 2.210e-59 Identity = 100/164 (60.98%), Postives = 129/164 (78.66%), Query Frame = 1
Query: 433 DIDQRDADEPLAVTEYVEDL----YVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 912
D+D RDA P AVTEYV D+ Y RE+E+ T V+ YM Q ++NE+MR+ILIDWLVEVHLKFKLVP+TLYLTV LID+YL V R NLQLVGV+A+LLASKYEEIYPP+++DLV+ITD+AY ++QIL ME M AL++++T+ +I+CF++RYLK
Sbjct: 1 DVDARDASNPQAVTEYVNDMRAPAYAHFREKELETSVNPTYMSRQAHINEKMRAILIDWLVEVHLKFKLVPETLYLTVNLIDRYLLGSPVERSNLQLVGVSALLLASKYEEIYPPELKDLVYITDKAYTQEQILSMEEKMVKALKYKMTIASIHCFMMRYLKAG 164
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A1E7FEB9_9STRA (Cyclin_N-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEB9_9STRA) HSP 1 Score: 199 bits (507), Expect = 2.730e-59 Identity = 96/159 (60.38%), Postives = 130/159 (81.76%), Query Frame = 1
Query: 436 IDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 912
ID+RDA++PL TEYV+D+Y R +E +T V YMD+Q ++NERMRSIL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE + V+R LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY R +I+EME + L++ +T+P+ + FL+R+LK +
Sbjct: 7 IDERDAEDPLCATEYVQDMYEHFRLKEGSTSVRPLYMDNQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLERQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRTEIIEMEEKILKTLEYNITIPSAHAFLVRFLKAA 165
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A7S4AAP4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AAP4_9STRA) HSP 1 Score: 202 bits (515), Expect = 4.130e-59 Identity = 97/159 (61.01%), Postives = 130/159 (81.76%), Query Frame = 1
Query: 436 IDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 912
ID+RDA++PL TEYV+D+Y RE+E T V YM++Q ++NERMRSIL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE + V+R LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY R +I+EME + L++ +T+P+ + FL+RYLK +
Sbjct: 120 IDERDAEDPLCATEYVQDMYDHFREKEAITSVRPLYMENQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLERQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRKEIIEMEEQILKTLEYNITIPSAHAFLVRYLKAA 278
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A7S3Q0F9_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0F9_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.350e-58 Identity = 97/163 (59.51%), Postives = 131/163 (80.37%), Query Frame = 1
Query: 424 TPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 912
T DID+RD ++PL VT YV+D+Y ++E +T V YM+ Q N+NERMRSIL+DWLVEVHLKFKLVP+TLYLT+ LID++LE E ++R LQLVGVT++L+ASKYEEIYPP++RDLV+I D AY+++ ILEME M L++R+T+P+ + FL+RYLK +
Sbjct: 96 TVDDIDERDKNDPLCVTSYVQDMYEHFADKEQSTSVRPVYMEDQSNINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRFLEKEDISRPKLQLVGVTSLLIASKYEEIYPPELRDLVYICDHAYSKELILEMEYKMLTTLEYRITIPSAHAFLVRYLKAA 258
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A7S2PNA7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PNA7_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.590e-58 Identity = 99/160 (61.88%), Postives = 129/160 (80.62%), Query Frame = 1
Query: 433 DIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 912
DID+RD D+PL VT YV+D+Y R +E +T V YM+ Q +NERMRSIL+DWLVEVHLKFKLVP+TLYLTV +ID+YL VTR LQLVGVTA+L+ASKYEEIYPP++RDLV+I DRAY++++ILEME + LQ+++T+P+ + FL+RYLK +
Sbjct: 145 DIDERDTDDPLCVTSYVQDMYEHFRTKEGSTSVRPVYMEDQQYINERMRSILVDWLVEVHLKFKLVPETLYLTVNIIDRYLAKTEVTRPKLQLVGVTALLIASKYEEIYPPELRDLVYICDRAYSKNEILEMEEVVLKKLQYQITIPSAHAFLVRYLKAA 304
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Match: A0A448ZSV9_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSV9_9STRA) HSP 1 Score: 197 bits (502), Expect = 3.840e-57 Identity = 95/159 (59.75%), Postives = 129/159 (81.13%), Query Frame = 1
Query: 436 IDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKVS 912
ID+RDA++PL TEYV+D+Y R +E T V YM++Q ++NERMRSIL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE + V+R LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY R +I+EME + L++ +T+P+ + FL+R+LK +
Sbjct: 123 IDERDAEDPLCATEYVQDMYDHFRAKEGITSVRPLYMENQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLERQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRKEIIEMEEQILKTLEYNITIPSAHAFLVRFLKAA 281 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16263.4540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16263.4540.1 >prot_Ecto-sp13_S_contig16263.4540.1 ID=prot_Ecto-sp13_S_contig16263.4540.1|Name=mRNA_Ecto-sp13_S_contig16263.4540.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=304bp MHTRRNTAVQENTGFGMDENAKPSDLSGAAGKAALGGGAKKGLGGVQTRRback to top mRNA from alignment at Ecto-sp13_S_contig16263:160..2121- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16263.4540.1 ID=mRNA_Ecto-sp13_S_contig16263.4540.1|Name=mRNA_Ecto-sp13_S_contig16263.4540.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1962bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16263:160..2121- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16263:160..2121- >mRNA_Ecto-sp13_S_contig16263.4540.1 ID=mRNA_Ecto-sp13_S_contig16263.4540.1|Name=mRNA_Ecto-sp13_S_contig16263.4540.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=912bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16263:160..2121- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |