prot_Ecto-sp13_S_contig16246.4532.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig16246.4532.1
Unique Name	prot_Ecto-sp13_S_contig16246.4532.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	436

Homology

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BLAST of mRNA_Ecto-sp13_S_contig16246.4532.1 vs. uniprot
Match: D7G6H1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6H1_ECTSI)

HSP 1 Score: 528 bits (1359), Expect = 8.910e-183
Identity = 358/416 (86.06%), Postives = 373/416 (89.66%), Query Frame = 0

Query:    1 SDLHPLSAAGYLILSVEALVITFSWPRLYPPAGRKRSESSARHRQQRRRSRQLSSSGSADLFGGATPSPTINGQRFNTNGGKASSRWSGGSSGWWESEGGLEGLSEAGRSSAPSSLVSIGGRRRRAARLQSGQSGGGGFVGEDSLETFPEKRSAVDGDVRVPLPPKSRMRYARPVLLVLLTLSASYLTTWLLLSISSARVSTAVDEDAISNTRDIEAMKKGAEMERSMREEREEGARXMXLXEKAVREAVAAKEXXXRQRXXXXXXXXXXXXXXXXKDKRLEEARXXXXXXXXXXXXXXXXXXXXXXXXXXXQAARLRXXXXXXXXXXXXAAVTKAKLEAEQTKKR--AKMAATLDQRRSIGLEDSLTNGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRKVRRQHA 414
            SDLHPL AAGYLILSVEAL +TF WPRLYPPAGRKRSESSARHR+Q RRSR LS SGSADLFGGATPSPTINGQR NTNGGKASSRWSG SSGWWESEGGLEGLSEAGRSSAPSSLVSIGGRRRRAARLQSGQSGGGGF+GE+ LETFPEKRSAVDGD+RVPLPPKSRMRYARPVL+VLLTLSASYLTTWLLLSISSARVSTAVDEDA+S+TRDI AMKKGAEMER  REEREEGAR M L EKA+REAVAAKE XX   XXXXXXXXXXXXXX  ++KRLEEAR XXXXXXXXXXXXXXXXXXXXXXXXXXQAARLR XXXXXXXXXXX                  AKMAATL+Q RSIGLED+L+NGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRK+RRQ A
Sbjct:   14 SDLHPLRAAGYLILSVEALTVTFWWPRLYPPAGRKRSESSARHRRQHRRSRHLSRSGSADLFGGATPSPTINGQRSNTNGGKASSRWSGDSSGWWESEGGLEGLSEAGRSSAPSSLVSIGGRRRRAARLQSGQSGGGGFLGEEPLETFPEKRSAVDGDMRVPLPPKSRMRYARPVLIVLLTLSASYLTTWLLLSISSARVSTAVDEDAMSSTRDIVAMKKGAEMERRTREEREEGARRMELEEKALREAVAAKEAXXXXXXXXXXXXXXXXXXXDAEEKRLEEARAXXXXXXXXXXXXXXXXXXXXXXXXXXQAARLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKMAATLEQTRSIGLEDALSNGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRKIRRQQA 429

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BLAST of mRNA_Ecto-sp13_S_contig16246.4532.1 vs. uniprot
Match: A0A6H5L6N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N1_9PHAE)

HSP 1 Score: 477 bits (1228), Expect = 1.030e-162
Identity = 332/431 (77.03%), Postives = 344/431 (79.81%), Query Frame = 0

Query:    1 SDLHPLSAAGYLILSVEALVITFSWPRLYPPAGRKRSESSARHRQQRRRSRQLSSSGSADLFGGATPSPTINGQRFNTNGGKASSRWSGGSSGWWESEGGLEGLSEAGRSSAPSSLVSIGGRRRRAARLQSGQSGGGGFVGEDSLETFPEKRSAVDGDVRVPLPPKSRMRYARPVLLVLLTLSASYLTTWLLLSISSARVSTAVDEDAISNTRDIEAMKKGAEMERSMREEREEGARXMXLXEKAVREAVAAKEXXXRQRXXXXXXXXXXXXXXXXKDKRLEEARXXXXXXXXXXXXXXXXXXXXXXXXXXXQAARLRXXXXXXXXXXXXAAVTKAKLEAEQTKKRAKMAATLDQRRSIGLEDSLTNGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRKVRRQHAVRPCTACRLTVAPEGRV 431
            SDLHPLSAAGYLILSVEALV+TF WPRLYPPAGRKRSESS         SR L SSGS   FGGATPSPTINGQRFNTNGGKASSRWSG SSGWWES+GGLEGLSEAGRSSAPSSLVSIGGR                F GE+ LETFPEKRSAVDGDVRVPLP KSRMRYARPVLLVLLTLSASYLTTWLLLSIS AR+STAVDE A+SNTRDIEAMKK AE+ER +REEREE A  M L EKA++EAVAA  XXX   XXXXXXXXXXXXXXXX         XXXXXXX           XXXXXXXXXQAARLRXXXXXXXXXXXX                 KMAATL+QRRSIGLED+LTNGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRK+RRQ AVRPCTACRLTVAPEGRV
Sbjct:   14 SDLHPLSAAGYLILSVEALVVTFWWPRLYPPAGRKRSESSXXXXXXXXXSRHLGSSGSTVFFGGATPSPTINGQRFNTNGGKASSRWSGDSSGWWESDGGLEGLSEAGRSSAPSSLVSIGGRXXXXXXXXXXXXXXXXFFGEEPLETFPEKRSAVDGDVRVPLPSKSRMRYARPVLLVLLTLSASYLTTWLLLSISLARISTAVDEGAMSNTRDIEAMKKAAEVERRVREEREEAANRMELEEKALQEAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXRERRAREEQKAXXXXXXXXXQAARLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMAATLEQRRSIGLEDALTNGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRKIRRQQAVRPCTACRLTVAPEGRV 443

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig16246.4532.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig16246.4532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G6H1_ECTSI	8.910e-183	86.06	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L6N1_9PHAE	1.030e-162	77.03	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 238..304
None	No IPR available	COILS	Coil	Coil	coord: 307..341
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 194..435
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 175..193
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 27..174
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..26
None	No IPR available	TMHMM	TMhelix		coord: 4..26
None	No IPR available	TMHMM	TMhelix		coord: 175..194

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig16246	contig	Ecto-sp13_S_contig16246:72..3459 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig16246.4532.1	mRNA_Ecto-sp13_S_contig16246.4532.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig16246 72..3459 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig16246.4532.1 ID=prot_Ecto-sp13_S_contig16246.4532.1|Name=mRNA_Ecto-sp13_S_contig16246.4532.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=436bp
SDLHPLSAAGYLILSVEALVITFSWPRLYPPAGRKRSESSARHRQQRRRS
RQLSSSGSADLFGGATPSPTINGQRFNTNGGKASSRWSGGSSGWWESEGG
LEGLSEAGRSSAPSSLVSIGGRRRRAARLQSGQSGGGGFVGEDSLETFPE
KRSAVDGDVRVPLPPKSRMRYARPVLLVLLTLSASYLTTWLLLSISSARV
STAVDEDAISNTRDIEAMKKGAEMERSMREEREEGARRMELEEKAVREAV
AAKEARQRQREAERRKDLERKALADAKDKRLEEARALREKQQREQRAREE
QRGRDEKRAKDEQAARLREQKASEERKARDAAVTKAKLEAEQTKKRAKMA
ATLDQRRSIGLEDSLTNGSTELRVMPNGDLVLADNGRPVWTARGSKKRRS
LVGWIWRKVRRQHAVRPCTACRLTVAPEGRVVRCI*