mRNA_Ecto-sp13_S_contig1624.4525.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: A0A6H5KHT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHT9_9PHAE) HSP 1 Score: 557 bits (1435), Expect = 3.230e-189 Identity = 371/484 (76.65%), Postives = 387/484 (79.96%), Query Frame = 1
Query: 166 MAKDRSRKDNQEVAAQVDVGRYLHLASGLGHDLVVSLLLERGADPNIDSNGDGMTPLLLAAKEGHVRVVVALLSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDAVDSIEALVKAGASLENRDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMENNLWGIATALMAAGADVNVRGGSNGYSPLDCAVRSDGMDLTRQVLQRGGIATESASDGCTALHWAGWNMNASAIDLLVGAGANLEAKLADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCAIESSWETVDALLKAGAGETRLDCQGQTPLDLLEARIAAGDLVGASANAAEHTRSILVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLAVADDTSTSPSTKKLSTASTGVGSGRRGTNRDSSADNFQRAMRSLMLLKEDGLFRKIVAFL 1617
MAKD +RKDN+EVAAQVDVGRYLHLASGLGHDLVVSLLLE GADPNID++GDGMTPLLLAAKEGHVRVVVALLSDA HDAV SI+ALVKAGA+LENRDAE XXXXXXXXXXXXXXXXXXXXXXX MEN+LWGIATALMAAGADVNVR GSNGYSPLDCAVRS GMDLTRQVLQRG IATESASDGCTALHWAGWNMNASA+DLLVGAGA+LEAKLADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNC ESSWETVDALLKAGA ETRLDCQGQTPLD+LEARIA GD+VGA NAAEHTRS+LVNAPKDRAQRAWSRRSFFVMCRAHP+R RL V D T+TSPS KKL+T +T VGSG RGTN DS AD FQRAMRSLMLLKEDGLFRKIVAFL
Sbjct: 1 MAKDGNRKDNKEVAAQVDVGRYLHLASGLGHDLVVSLLLEHGADPNIDTDGDGMTPLLLAAKEGHVRVVVALLSDARVDVGQRHGAGGRSALDLAAIGGHADVISAIVERQPDVLDSTSDDTGFSALHHAANHDAVHSIDALVKAGANLENRDAEGCTPLRVAAGCASEAAXXXXXXXXXXXXXXXXXXXXXXXDAMENDLWGIATALMAAGADVNVRRGSNGYSPLDCAVRSGGMDLTRQVLQRGAIATESASDGCTALHWAGWNMNASAVDLLVGAGADLEAKLADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCTTESSWETVDALLKAGADETRLDCQGQTPLDVLEARIAVGDVVGA--NAAEHTRSMLVNAPKDRAQRAWSRRSFFVMCRAHPNRARLTVVDGTTTSPSAKKLATEATAVGSGWRGTNWDSRADIFQRAMRSLMLLKEDGLFRKIVAFL 482
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: D7G0W2_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W2_ECTSI) HSP 1 Score: 396 bits (1018), Expect = 1.150e-129 Identity = 216/278 (77.70%), Postives = 227/278 (81.65%), Query Frame = 1
Query: 790 MAAGADVNVRGGSNGYSPLDCAVRSDGMDLTRQVLQRGGIATESASDGCTALHWAGWNMNASAIDLLVGAGANLEAKLA-DEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCAIESSWETVDALLKAGAGETRLDCQGQTPLDLLEARIAAGDLVGASANAAEHTRSILVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLAVADDTSTSPSTKK-LSTASTGVGSGRRGTNRDSSADNFQRAMRSLMLLKEDGLFRKIVAFL 1617
MAAGADVNVR GSNGYSPLDC+VRSDGMDLTRQVLQRG IATES+SDGCTALHWAGWNMNASAIDLLVGAGANLEAK+A D E TPLHLAARQAGN QNC ESSWETVDALLKAGA ETRLDCQGQTPLD+LEARIAAGDL+GAS N AE TRS+LVNAPKDRAQRAWSRRSFFVMCRAHPDRVRL V DDT+TSP KK ++ A+T VGSGRRG NRDS ADNFQRAMRSL+ LKEDGLFRKIVAFL
Sbjct: 1 MAAGADVNVRDGSNGYSPLDCSVRSDGMDLTRQVLQRGAIATESSSDGCTALHWAGWNMNASAIDLLVGAGANLEAKIAADAEATPLHLAARQAGNAAVIEALARHGADVHAQETPSGNTPLHVAAQNCTTESSWETVDALLKAGADETRLDCQGQTPLDVLEARIAAGDLMGASVNEAERTRSVLVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLTVVDDTTTSPRAKKTMAAAATAVGSGRRGANRDS-ADNFQRAMRSLIRLKEDGLFRKIVAFL 277
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: D7G0W1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W1_ECTSI) HSP 1 Score: 358 bits (918), Expect = 6.320e-113 Identity = 278/386 (72.02%), Postives = 299/386 (77.46%), Query Frame = 1
Query: 187 KDNQEVAAQVDVGRYLHLASGLGHDLVVSLLLERGADPNIDSNGDGMTPLLLAAKEGHVRVVVALLSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDAVDSIEALVKAGASLENRDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMENNLWGIATALMAAGADVNVRGGSNGYSPLDCAVRSDGMDLTRQVLQRGGIATESASDGCTALHWAGWNMNASAIDLLVGAGANLEAKLADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCAIESSWETVDALLKAGAGETRLDCQGQTPLDLLEARIAAGDLVGASANAAEHTRSIL 1344
++ EVAAQ+D+G YLH ASGLGHDL+VSLLL+ GADPNID++GDGMTPLLLA+KEGHVRVVVALLSDA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V AGA+LENRDA+ MEN+LWGIATALMAAGADVNVR GSNGYSPLDC+VRSDGMDLTRQVLQRG IAT SASDG TALHWAGWNMNASA+DLLV GA+LEAK+A + TPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNC I+SSWETVDALLKAGA ETRLDCQGQTPLD+LEARIAAGDL+GASAN AE TRS+L
Sbjct: 6 RNENEVAAQLDIGVYLHRASGLGHDLIVSLLLKHGADPNIDTDGDGMTPLLLASKEGHVRVVVALLSDARVDIGQRHGEGGHSALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNAGANLENRDAKGCTPLRVAAGCASEAALLALLRHGDDKESTGVDGLTPLQDAMENDLWGIATALMAAGADVNVRDGSNGYSPLDCSVRSDGMDLTRQVLQRGAIATASASDGYTALHWAGWNMNASAVDLLVEVGADLEAKVALDGCTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCTIKSSWETVDALLKAGADETRLDCQGQTPLDVLEARIAAGDLMGASANEAERTRSML 391
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: D7G0W3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W3_ECTSI) HSP 1 Score: 116 bits (291), Expect = 1.800e-26 Identity = 59/76 (77.63%), Postives = 66/76 (86.84%), Query Frame = 1
Query: 166 MAKDRSRKDNQEVAAQVDVGRYLHLASGLGHDLVVSLLLERGADPNIDSNGDGMTPLLLAAKEGHVRVVVALLSDA 393
MAKD + +DN+EVAAQVDVG YLH S LGHDL+VSLLL+ GADPNI ++ DGMTPLLLAAKEGHVRV VALLSDA
Sbjct: 1 MAKDGNSRDNEEVAAQVDVGTYLHRTSRLGHDLIVSLLLKHGADPNIVTDFDGMTPLLLAAKEGHVRVAVALLSDA 76
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: D7G3P2_ECTSI (Similar to ankyrin 3, epithelial isoform e isoform 19 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P2_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 7.030e-13 Identity = 76/226 (33.63%), Postives = 101/226 (44.69%), Query Frame = 1
Query: 772 GIATALMAAGADVNVRGGSNGYSPLDCAVRSDGMDLTRQVLQRGGIATESASDGC-TALHWAGWNMNASAIDLLVGAGANLEAKLADEEVT----PLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCAIESSWET-VDALLKAGAGETRLDCQGQTPLDLLEARI-AAGDLVGASANAAEHTRSILVNAPKDRAQRAWSRRSFFVMCRAHPDRV 1428
G+ AL+ AGAD+ GG + L A + T L R G + +G T L A N A LV AGA++ L E V + LA G + A E S+ VD LL+AGA ET ++ +GQTPLD++ + L+ + R++LVNAPKDRA RAWSRR FFV+CRA P+RV
Sbjct: 230 GVIDALVEAGADLEAEGGLGVGTALHVAAEFPDSEATLLALLRHGAKVDPIRNGSETPLSVAVKARNVCAAKALVSAGADVREHLLRESVECSQHDMLLALLGRGAHVNTKGASDGNTPL-----------------HLAAEKSFRVKVDVLLQAGADETAVNHKGQTPLDVIGLKTDTMRTLMFGDHREEDAIRTLLVNAPKDRANRAWSRRGFFVLCRAFPERV 438
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 8.750e-8 Identity = 66/229 (28.82%), Postives = 90/229 (39.30%), Query Frame = 1
Query: 778 ATALMAAGADVNVRGGSNGYSPLDCAVRSDGMDLTRQVLQRGGIATESASDGCTALHWAGWNMNASAIDLLVGAGANLEAKLADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCAIESSWETVDALLKAGAGETRLDCQGQTPLDLLEARIAAGDLVGASANAAEHTRSILVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLAVADDTSTSP 1464
A AL+ AGADV +R G S GG ++G TAL A A AID+L AGAN+EA+ TPLH+A+++ + E VD LL+ GA ET + G T D++ + D + A + R +L AP DRA W RR F ++ RAH R+ TS +P
Sbjct: 506 AQALLDAGADVALRQNGVGLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQANGS--TPLHVASQEG--RLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSL---AEDVDRVRKLLARAPADRA---WRRRGFLILSRAHYPGGRVQFGHRTSQAP 724
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 63.2 bits (152), Expect = 9.300e-7 Identity = 85/198 (42.93%), Postives = 109/198 (55.05%), Query Frame = 1
Query: 844 LDCAVRSDGMDLTRQVLQRGGIATESASDGCTALHWAGWNMNASAIDLLVGAGANLEAK-LADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCAIESSWETVDALLKAGAGETRLDCQGQTPLDLLEARIAAGDLVGASANAAEHTRSILVNAPKDRAQRAWSRRSFFVMCRAHPDRVRL 1434
LD A S +++ R ++ G +A+ G TALHWA A+AID+LVGAGA+++A+ ++ XXXXXXXXXXXXXXXXXXXXXXXXXX Q S + V LL+ GA ET + QG+T D RI E RS+L AP DRA W RR V+C A+PDR++L
Sbjct: 174 LDFAASSQDVEILRMLIDHGMEVNLAAAFG-TALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQR---RGSVQVVGLLLRWGADETIVCKQGKTAAD----RIGTRRFPSTEPGDDERARSLLTRAPADRA---WRRRGLLVLCHAYPDRLQL 360
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: A0A800FAR5_9BACT (Ankyrin repeat domain-containing protein (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A800FAR5_9BACT) HSP 1 Score: 55.8 bits (133), Expect = 5.880e-6 Identity = 35/98 (35.71%), Postives = 50/98 (51.02%), Query Frame = 1
Query: 769 WGIATALMAAGADVNVRGGSNGYSPLDCAVRSDGMDLTRQVLQRGGIATESASDGCTALHWAGWNMNASAIDLLVGAGANLEAKLADEEVTPLHLAAR 1062
+G+A L AA + +PL A R+ ++ R +L G + DG T LHWA +A+ DLL+ AGA +EA+ TPLHLA+R
Sbjct: 10 FGLAALLAAAALPTD--------APLIDAARNGDVEAVRSLLAEGADVNTAQGDGMTGLHWAAEGGHAAVADLLLAAGAAVEARTRVGGYTPLHLASR 99
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: D7G292_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G292_ECTSI) HSP 1 Score: 58.2 bits (139), Expect = 4.250e-5 Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 1192 ETVDALLKAGAGETRLDCQGQTPLDLLEARIAAGDLVGASANAAEHTRSILVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLAV 1440
+ D LL+ GA ET ++ +G+T + ++ RIA + + E +L AP+DRA W RR F V+CRAH DRVRLAV
Sbjct: 291 DAADLLLRWGADETAVNLEGETVVSMVIRRIA--EALETRCPPLERVSKLLARAPQDRA---WRRRGFLVLCRAHRDRVRLAV 368
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: A0A6H5KB54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB54_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 5.880e-5 Identity = 111/291 (38.14%), Postives = 137/291 (47.08%), Query Frame = 1
Query: 841 PLDCAVRSDGMDLTRQVLQRGGIATESASD---GCTALHWAGWNMNASAIDLLVGAGANLEAKLADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCAIESSWETVDALLKAGAGETRLDCQGQTPLDLLEARIAAGDLVGASANAAEHTRSILVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLAV-----ADDTSTS-------PSTKKLSTAST--------------GVGSGRRGTNR-DSSADN--FQRAMRSLMLLKEDGLFRKIVAFL 1617
PL AVR D + R +L G A SD G T LH+A NA AI +L+ AGA++++ + ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ET +D QG TP + + A A D E +L AP+DRA W RR F +CRAHPDR+RL V AD+ S PS + + G GS R G R D D F+ A L+ L E+ +FRKIV FL
Sbjct: 181 PLLRAVRQDHISTVRVLLAVGANANNPFSDYDYGTTVLHFAAETDNAVAIPVLIEAGASVQS-------SDMYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETAVDLQGSTPSEFIPAIAEAAD---EDHRRLERLSKLLTRAPQDRA---WRRRGFLALCRAHPDRLRLVVEIPKTADEASGKQPQEQERPSRRARKGQQSKVDVEVDDAHGSVSGEGSSRAGIVRVDGKGDGGGFEFAAGWLVALAEEDVFRKIVGFL 458 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1624.4525.1 >prot_Ecto-sp13_S_contig1624.4525.1 ID=prot_Ecto-sp13_S_contig1624.4525.1|Name=mRNA_Ecto-sp13_S_contig1624.4525.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=485bp MAKDRSRKDNQEVAAQVDVGRYLHLASGLGHDLVVSLLLERGADPNIDSNback to top mRNA from alignment at Ecto-sp13_S_contig1624:2485..6353+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1624.4525.1 ID=mRNA_Ecto-sp13_S_contig1624.4525.1|Name=mRNA_Ecto-sp13_S_contig1624.4525.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3869bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1624:2485..6353+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1624:2485..6353+ >mRNA_Ecto-sp13_S_contig1624.4525.1 ID=mRNA_Ecto-sp13_S_contig1624.4525.1|Name=mRNA_Ecto-sp13_S_contig1624.4525.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1455bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1624:2485..6353+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |