mRNA_Ecto-sp13_S_contig1624.4525.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1624.4525.1
Unique NamemRNA_Ecto-sp13_S_contig1624.4525.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: A0A6H5KHT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHT9_9PHAE)

HSP 1 Score: 557 bits (1435), Expect = 3.230e-189
Identity = 371/484 (76.65%), Postives = 387/484 (79.96%), Query Frame = 1
Query:  166 MAKDRSRKDNQEVAAQVDVGRYLHLASGLGHDLVVSLLLERGADPNIDSNGDGMTPLLLAAKEGHVRVVVALLSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDAVDSIEALVKAGASLENRDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMENNLWGIATALMAAGADVNVRGGSNGYSPLDCAVRSDGMDLTRQVLQRGGIATESASDGCTALHWAGWNMNASAIDLLVGAGANLEAKLADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCAIESSWETVDALLKAGAGETRLDCQGQTPLDLLEARIAAGDLVGASANAAEHTRSILVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLAVADDTSTSPSTKKLSTASTGVGSGRRGTNRDSSADNFQRAMRSLMLLKEDGLFRKIVAFL 1617
            MAKD +RKDN+EVAAQVDVGRYLHLASGLGHDLVVSLLLE GADPNID++GDGMTPLLLAAKEGHVRVVVALLSDA                                                        HDAV SI+ALVKAGA+LENRDAE                XXXXXXXXXXXXXXXXXXXXXXX  MEN+LWGIATALMAAGADVNVR GSNGYSPLDCAVRS GMDLTRQVLQRG IATESASDGCTALHWAGWNMNASA+DLLVGAGA+LEAKLADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNC  ESSWETVDALLKAGA ETRLDCQGQTPLD+LEARIA GD+VGA  NAAEHTRS+LVNAPKDRAQRAWSRRSFFVMCRAHP+R RL V D T+TSPS KKL+T +T VGSG RGTN DS AD FQRAMRSLMLLKEDGLFRKIVAFL
Sbjct:    1 MAKDGNRKDNKEVAAQVDVGRYLHLASGLGHDLVVSLLLEHGADPNIDTDGDGMTPLLLAAKEGHVRVVVALLSDARVDVGQRHGAGGRSALDLAAIGGHADVISAIVERQPDVLDSTSDDTGFSALHHAANHDAVHSIDALVKAGANLENRDAEGCTPLRVAAGCASEAAXXXXXXXXXXXXXXXXXXXXXXXDAMENDLWGIATALMAAGADVNVRRGSNGYSPLDCAVRSGGMDLTRQVLQRGAIATESASDGCTALHWAGWNMNASAVDLLVGAGADLEAKLADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCTTESSWETVDALLKAGADETRLDCQGQTPLDVLEARIAVGDVVGA--NAAEHTRSMLVNAPKDRAQRAWSRRSFFVMCRAHPNRARLTVVDGTTTSPSAKKLATEATAVGSGWRGTNWDSRADIFQRAMRSLMLLKEDGLFRKIVAFL 482          
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: D7G0W2_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W2_ECTSI)

HSP 1 Score: 396 bits (1018), Expect = 1.150e-129
Identity = 216/278 (77.70%), Postives = 227/278 (81.65%), Query Frame = 1
Query:  790 MAAGADVNVRGGSNGYSPLDCAVRSDGMDLTRQVLQRGGIATESASDGCTALHWAGWNMNASAIDLLVGAGANLEAKLA-DEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCAIESSWETVDALLKAGAGETRLDCQGQTPLDLLEARIAAGDLVGASANAAEHTRSILVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLAVADDTSTSPSTKK-LSTASTGVGSGRRGTNRDSSADNFQRAMRSLMLLKEDGLFRKIVAFL 1617
            MAAGADVNVR GSNGYSPLDC+VRSDGMDLTRQVLQRG IATES+SDGCTALHWAGWNMNASAIDLLVGAGANLEAK+A D E TPLHLAARQAGN                              QNC  ESSWETVDALLKAGA ETRLDCQGQTPLD+LEARIAAGDL+GAS N AE TRS+LVNAPKDRAQRAWSRRSFFVMCRAHPDRVRL V DDT+TSP  KK ++ A+T VGSGRRG NRDS ADNFQRAMRSL+ LKEDGLFRKIVAFL
Sbjct:    1 MAAGADVNVRDGSNGYSPLDCSVRSDGMDLTRQVLQRGAIATESSSDGCTALHWAGWNMNASAIDLLVGAGANLEAKIAADAEATPLHLAARQAGNAAVIEALARHGADVHAQETPSGNTPLHVAAQNCTTESSWETVDALLKAGADETRLDCQGQTPLDVLEARIAAGDLMGASVNEAERTRSVLVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLTVVDDTTTSPRAKKTMAAAATAVGSGRRGANRDS-ADNFQRAMRSLIRLKEDGLFRKIVAFL 277          
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: D7G0W1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W1_ECTSI)

HSP 1 Score: 358 bits (918), Expect = 6.320e-113
Identity = 278/386 (72.02%), Postives = 299/386 (77.46%), Query Frame = 1
Query:  187 KDNQEVAAQVDVGRYLHLASGLGHDLVVSLLLERGADPNIDSNGDGMTPLLLAAKEGHVRVVVALLSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDAVDSIEALVKAGASLENRDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMENNLWGIATALMAAGADVNVRGGSNGYSPLDCAVRSDGMDLTRQVLQRGGIATESASDGCTALHWAGWNMNASAIDLLVGAGANLEAKLADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCAIESSWETVDALLKAGAGETRLDCQGQTPLDLLEARIAAGDLVGASANAAEHTRSIL 1344
            ++  EVAAQ+D+G YLH ASGLGHDL+VSLLL+ GADPNID++GDGMTPLLLA+KEGHVRVVVALLSDA                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          V AGA+LENRDA+                                         MEN+LWGIATALMAAGADVNVR GSNGYSPLDC+VRSDGMDLTRQVLQRG IAT SASDG TALHWAGWNMNASA+DLLV  GA+LEAK+A +  TPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNC I+SSWETVDALLKAGA ETRLDCQGQTPLD+LEARIAAGDL+GASAN AE TRS+L
Sbjct:    6 RNENEVAAQLDIGVYLHRASGLGHDLIVSLLLKHGADPNIDTDGDGMTPLLLASKEGHVRVVVALLSDARVDIGQRHGEGGHSALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNAGANLENRDAKGCTPLRVAAGCASEAALLALLRHGDDKESTGVDGLTPLQDAMENDLWGIATALMAAGADVNVRDGSNGYSPLDCSVRSDGMDLTRQVLQRGAIATASASDGYTALHWAGWNMNASAVDLLVEVGADLEAKVALDGCTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCTIKSSWETVDALLKAGADETRLDCQGQTPLDVLEARIAAGDLMGASANEAERTRSML 391          
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: D7G0W3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W3_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 1.800e-26
Identity = 59/76 (77.63%), Postives = 66/76 (86.84%), Query Frame = 1
Query:  166 MAKDRSRKDNQEVAAQVDVGRYLHLASGLGHDLVVSLLLERGADPNIDSNGDGMTPLLLAAKEGHVRVVVALLSDA 393
            MAKD + +DN+EVAAQVDVG YLH  S LGHDL+VSLLL+ GADPNI ++ DGMTPLLLAAKEGHVRV VALLSDA
Sbjct:    1 MAKDGNSRDNEEVAAQVDVGTYLHRTSRLGHDLIVSLLLKHGADPNIVTDFDGMTPLLLAAKEGHVRVAVALLSDA 76          
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: D7G3P2_ECTSI (Similar to ankyrin 3, epithelial isoform e isoform 19 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P2_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 7.030e-13
Identity = 76/226 (33.63%), Postives = 101/226 (44.69%), Query Frame = 1
Query:  772 GIATALMAAGADVNVRGGSNGYSPLDCAVRSDGMDLTRQVLQRGGIATESASDGC-TALHWAGWNMNASAIDLLVGAGANLEAKLADEEVT----PLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCAIESSWET-VDALLKAGAGETRLDCQGQTPLDLLEARI-AAGDLVGASANAAEHTRSILVNAPKDRAQRAWSRRSFFVMCRAHPDRV 1428
            G+  AL+ AGAD+   GG    + L  A      + T   L R G   +   +G  T L  A    N  A   LV AGA++   L  E V      + LA    G                                + A E S+   VD LL+AGA ET ++ +GQTPLD++  +      L+       +  R++LVNAPKDRA RAWSRR FFV+CRA P+RV
Sbjct:  230 GVIDALVEAGADLEAEGGLGVGTALHVAAEFPDSEATLLALLRHGAKVDPIRNGSETPLSVAVKARNVCAAKALVSAGADVREHLLRESVECSQHDMLLALLGRGAHVNTKGASDGNTPL-----------------HLAAEKSFRVKVDVLLQAGADETAVNHKGQTPLDVIGLKTDTMRTLMFGDHREEDAIRTLLVNAPKDRANRAWSRRGFFVLCRAFPERV 438          
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 8.750e-8
Identity = 66/229 (28.82%), Postives = 90/229 (39.30%), Query Frame = 1
Query:  778 ATALMAAGADVNVRGGSNGYSPLDCAVRSDGMDLTRQVLQRGGIATESASDGCTALHWAGWNMNASAIDLLVGAGANLEAKLADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCAIESSWETVDALLKAGAGETRLDCQGQTPLDLLEARIAAGDLVGASANAAEHTRSILVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLAVADDTSTSP 1464
            A AL+ AGADV +R    G S                    GG      ++G TAL  A     A AID+L  AGAN+EA+      TPLH+A+++                                        + E VD LL+ GA ET +   G T  D++  +    D +   A   +  R +L  AP DRA   W RR F ++ RAH    R+     TS +P
Sbjct:  506 AQALLDAGADVALRQNGVGLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQANGS--TPLHVASQEG--RLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSL---AEDVDRVRKLLARAPADRA---WRRRGFLILSRAHYPGGRVQFGHRTSQAP 724          
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 9.300e-7
Identity = 85/198 (42.93%), Postives = 109/198 (55.05%), Query Frame = 1
Query:  844 LDCAVRSDGMDLTRQVLQRGGIATESASDGCTALHWAGWNMNASAIDLLVGAGANLEAK-LADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCAIESSWETVDALLKAGAGETRLDCQGQTPLDLLEARIAAGDLVGASANAAEHTRSILVNAPKDRAQRAWSRRSFFVMCRAHPDRVRL 1434
            LD A  S  +++ R ++  G     +A+ G TALHWA     A+AID+LVGAGA+++A+ ++                XXXXXXXXXXXXXXXXXXXXXXXXXX    Q      S + V  LL+ GA ET +  QG+T  D    RI             E  RS+L  AP DRA   W RR   V+C A+PDR++L
Sbjct:  174 LDFAASSQDVEILRMLIDHGMEVNLAAAFG-TALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQR---RGSVQVVGLLLRWGADETIVCKQGKTAAD----RIGTRRFPSTEPGDDERARSLLTRAPADRA---WRRRGLLVLCHAYPDRLQL 360          
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: A0A800FAR5_9BACT (Ankyrin repeat domain-containing protein (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A800FAR5_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 5.880e-6
Identity = 35/98 (35.71%), Postives = 50/98 (51.02%), Query Frame = 1
Query:  769 WGIATALMAAGADVNVRGGSNGYSPLDCAVRSDGMDLTRQVLQRGGIATESASDGCTALHWAGWNMNASAIDLLVGAGANLEAKLADEEVTPLHLAAR 1062
            +G+A  L AA    +        +PL  A R+  ++  R +L  G     +  DG T LHWA    +A+  DLL+ AGA +EA+      TPLHLA+R
Sbjct:   10 FGLAALLAAAALPTD--------APLIDAARNGDVEAVRSLLAEGADVNTAQGDGMTGLHWAAEGGHAAVADLLLAAGAAVEARTRVGGYTPLHLASR 99          
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: D7G292_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G292_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 4.250e-5
Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 1192 ETVDALLKAGAGETRLDCQGQTPLDLLEARIAAGDLVGASANAAEHTRSILVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLAV 1440
            +  D LL+ GA ET ++ +G+T + ++  RIA  + +       E    +L  AP+DRA   W RR F V+CRAH DRVRLAV
Sbjct:  291 DAADLLLRWGADETAVNLEGETVVSMVIRRIA--EALETRCPPLERVSKLLARAPQDRA---WRRRGFLVLCRAHRDRVRLAV 368          
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Match: A0A6H5KB54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB54_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 5.880e-5
Identity = 111/291 (38.14%), Postives = 137/291 (47.08%), Query Frame = 1
Query:  841 PLDCAVRSDGMDLTRQVLQRGGIATESASD---GCTALHWAGWNMNASAIDLLVGAGANLEAKLADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCAIESSWETVDALLKAGAGETRLDCQGQTPLDLLEARIAAGDLVGASANAAEHTRSILVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLAV-----ADDTSTS-------PSTKKLSTAST--------------GVGSGRRGTNR-DSSADN--FQRAMRSLMLLKEDGLFRKIVAFL 1617
            PL  AVR D +   R +L  G  A    SD   G T LH+A    NA AI +L+ AGA++++       + ++        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     ET +D QG TP + + A   A D         E    +L  AP+DRA   W RR F  +CRAHPDR+RL V     AD+ S         PS +      +              G GS R G  R D   D   F+ A   L+ L E+ +FRKIV FL
Sbjct:  181 PLLRAVRQDHISTVRVLLAVGANANNPFSDYDYGTTVLHFAAETDNAVAIPVLIEAGASVQS-------SDMYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETAVDLQGSTPSEFIPAIAEAAD---EDHRRLERLSKLLTRAPQDRA---WRRRGFLALCRAHPDRLRLVVEIPKTADEASGKQPQEQERPSRRARKGQQSKVDVEVDDAHGSVSGEGSSRAGIVRVDGKGDGGGFEFAAGWLVALAEEDVFRKIVGFL 458          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1624.4525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KHT9_9PHAE3.230e-18976.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0W2_ECTSI1.150e-12977.70Ankyrin repeat domain protein n=1 Tax=Ectocarpus s... [more]
D7G0W1_ECTSI6.320e-11372.02Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G0W3_ECTSI1.800e-2677.63Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7G3P2_ECTSI7.030e-1333.63Similar to ankyrin 3, epithelial isoform e isoform... [more]
A0A6H5JHY9_9PHAE8.750e-828.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G137_ECTSI9.300e-742.93Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A800FAR5_9BACT5.880e-635.71Ankyrin repeat domain-containing protein (Fragment... [more]
D7G292_ECTSI4.250e-542.17Ankyrin repeat domain protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KB54_9PHAE5.880e-538.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1624contigEcto-sp13_S_contig1624:2485..6353 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score401.7
Seed ortholog evalue4.7e-109
Seed eggNOG ortholog2880.D7G0W2
Model size2373
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Ec32 ortholog descriptionAnkyrin repeat
Ec32 orthologEc-23_002070.1
Cds size1455
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462855.4265664-UTR-Ecto-sp13_S_contig1624:2484..26491681462855.4265664-UTR-Ecto-sp13_S_contig1624:2484..2649Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1624 2485..2649 +
1681462855.443741-UTR-Ecto-sp13_S_contig1624:4104..41191681462855.443741-UTR-Ecto-sp13_S_contig1624:4104..4119Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1624 4105..4119 +
1681462855.4512973-UTR-Ecto-sp13_S_contig1624:5615..63531681462855.4512973-UTR-Ecto-sp13_S_contig1624:5615..6353Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1624 5616..6353 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462855.436011-CDS-Ecto-sp13_S_contig1624:2649..41041681462855.436011-CDS-Ecto-sp13_S_contig1624:2649..4104Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1624 2650..4104 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1624.4525.1prot_Ecto-sp13_S_contig1624.4525.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1624 2650..4104 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1624.4525.1

>prot_Ecto-sp13_S_contig1624.4525.1 ID=prot_Ecto-sp13_S_contig1624.4525.1|Name=mRNA_Ecto-sp13_S_contig1624.4525.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=485bp
MAKDRSRKDNQEVAAQVDVGRYLHLASGLGHDLVVSLLLERGADPNIDSN
GDGMTPLLLAAKEGHVRVVVALLSDARVDVGQRHGSGGRSALDLAAIGGH
ADVISAIVERQPDVLDSASDETGFSALHHAANHDAVDSIEALVKAGASLE
NRDAEGFTPLRVAAGCASEAALLALLRHGADKESTGVDGLTPLQDAMENN
LWGIATALMAAGADVNVRGGSNGYSPLDCAVRSDGMDLTRQVLQRGGIAT
ESASDGCTALHWAGWNMNASAIDLLVGAGANLEAKLADEEVTPLHLAARQ
AGNAAVIEALARHGADVHAQETPSGQTPLHNAAQNCAIESSWETVDALLK
AGAGETRLDCQGQTPLDLLEARIAAGDLVGASANAAEHTRSILVNAPKDR
AQRAWSRRSFFVMCRAHPDRVRLAVADDTSTSPSTKKLSTASTGVGSGRR
GTNRDSSADNFQRAMRSLMLLKEDGLFRKIVAFL*
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mRNA from alignment at Ecto-sp13_S_contig1624:2485..6353+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1624.4525.1 ID=mRNA_Ecto-sp13_S_contig1624.4525.1|Name=mRNA_Ecto-sp13_S_contig1624.4525.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3869bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1624:2485..6353+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCTGCCCCAGCAGGCCAGCACCTGCCCGCTGTAGCGACACAGGATCAGCA CGCCCAAGGTCACTTACCAATCTCTTTACCCGCAAGGGCAAGGGCAAAAG CGGTAGCAGTGTCGACAACCAATAACACGCAGAAGCAACAAGGACACGTC GGAAGCATCATCATCATGGCAAAAGATCGTAGTAGGAAGGATAACCAGGA GGTTGCTGCTCAAGTCGACGTCGGAAGGTACCTCCACCTCGCCTCTGGAT TAGGGCACGACCTCGTCGTGTCGCTCTTGCTCGAGCGTGGCGCCGACCCC AACATCGATAGTAACGGCGATGGTATGACACCCCTTTTGTTGGCAGCTAA GGAAGGCCATGTTCGTGTGGTAGTAGCCCTGCTATCGGATGCTCGGGTCG ATGTCGGACAACGACACGGCTCGGGCGGTCGCTCGGCCCTTGACTTGGCA GCGATTGGAGGGCATGCCGATGTCATTTCGGCGATTGTCGAGCGCCAGCC GGACGTCCTTGATTCGGCGTCTGATGAGACTGGGTTTTCCGCCTTACACC ACGCCGCCAATCACGATGCGGTGGATTCCATCGAGGCCCTCGTAAAAGCT GGGGCAAGCCTTGAAAACCGAGACGCCGAAGGCTTCACACCCCTCCGGGT CGCCGCTGGTTGTGCGTCTGAGGCCGCCTTGCTAGCTCTACTTCGACACG GCGCTGACAAAGAGAGTACGGGGGTGGACGGGTTAACCCCACTGCAGGAT GCAATGGAGAATAATCTCTGGGGAATAGCAACTGCACTTATGGCCGCCGG TGCTGATGTCAATGTTCGGGGCGGGTCAAATGGGTACTCCCCGCTAGATT GTGCCGTCCGGAGTGATGGTATGGACCTCACGCGCCAGGTGTTGCAGCGC GGTGGGATTGCAACGGAGTCAGCTTCAGATGGATGCACAGCATTGCATTG GGCGGGATGGAACATGAACGCGTCCGCAATCGATCTCCTCGTAGGAGCCG GCGCCAACCTTGAGGCTAAGCTTGCAGACGAGGAAGTCACTCCTCTCCAT CTCGCTGCGCGGCAGGCCGGGAATGCAGCCGTGATCGAGGCCCTTGCAAG GCACGGTGCCGATGTTCATGCTCAAGAAACTCCTTCGGGGCAGACACCTT TGCACAACGCTGCTCAAAACTGCGCCATCGAATCTTCGTGGGAGACGGTG GACGCGCTGTTGAAGGCCGGGGCCGGCGAGACTAGACTGGATTGTCAAGG CCAAACTCCCCTAGATCTTCTCGAAGCCAGGATTGCTGCCGGCGATCTTG TGGGTGCGTCGGCGAACGCAGCCGAGCACACCCGGAGCATTCTGGTGAAT GCCCCGAAGGACAGGGCGCAGAGGGCTTGGAGTCGACGATCTTTCTTCGT TATGTGTCGCGCTCACCCTGACAGAGTGCGACTGGCTGTTGCGGACGACA CTTCAACCAGCCCCAGTACGAAGAAGTTGTCAACAGCATCTACAGGGGTT GGTAGCGGGCGGCGCGGGACCAACCGGGACAGTAGTGCGGATAATTTCCA GCGTGCCATGAGGAGCTTGATGCTGCTGAAGGAGGATGGACTATTCCGGA AGATCGTGGCGTTCCTGTGAACGATGGATCCGCTGGTGAGAGTGGCTCCT TTGACGTTTCACATGCGTTCCCCGCCCTTCCTCGATTGTGCAGCAGTTTC CTCTCTTCTGCGCGTTCGCCTTCTTACAGTGGTATGTGTTTGCTCTCGCA CACAAAACAACGATCAGCTACATGCTAAGATTCACGTCCAAGATGATGGT GAGATGCAGTTTATTGAGCTTACGGCCGTCTCTTCAGCAACCATTTTTCG CTTCCAAGTTTCCCAATTTTCGTACATGGACCGTTGAACCTCGATTTGTG GCCTAGGAAAAAAAAGTTTGGAATTTTTGCAAACTACTGATGACACCGAA ACAGTTTTGGAACGAGTTCATTTGGAAATCTGGAAAGCCGGAAGTTGGAA ATTTGGCAATTTGGAAGAAACATCGCTACGTATAGAGCGGCCCTGGCATG GCCGGCAACCACCTGATCCTCGCGCAACATAACTTGTTGCCTCGCTAAAC TGTAGGCAACAGGTTCAACAAGACAGGTTTGCGACCACCTTTCGTATCGG ACTGCTGTGGCGTGGATGGGACAGAAGACGGAGTGTTGATGTATTCGTGT GGTTGTGCCTCTGTCTTGATTGTGCGAACACCTTGGTATGTTTTTCGCGG CTGGGTGGCCTTGGGGTGATGCGTTGTACAGCAAGCGTGGTTTTTGTTCG TTTTTCGTTCGCGGGGATCTTCGAGTCAAGAACACATGAGCTGTGTGAGC TGTTGAGCATCCTCACAAATCACACCTAGCAGCAGGCACCGACTGTGGGC TGGTCCTGCTGCCTGTTTTTGGCTCGTCTTTCCTCACCCCTTGACGGATG ACGCCGGTGTCCTCTCATTGGCCCACTCCGGAGGGATCTCGTTGTATTTC CGTAGAGATGCTGTTCGTCTCTCCTTTGAAGCAAGTACACCCGCGCACCC ACGTCTCGCGTGCTTTCCTCTCTTGAGTTGTTGCTATGGCCTCCCGGAGT TCTTTCGTATGAGCACCTGTCGACTGTCGCCGCACGTGTATCTCAACACG CTTTTTACCACAACAAGTAAACCACGTTTGACGATGCGCGAAATAGAAGT TGTACGCCGAGCGCGGTGTGTGTTGACTTTGGCATCGCCTATTGCGACCC CGTTCGTGCGAGGTGCTTGTTGTGCACCCTCCATACGGGAACGCGTTGTT CGAGCAGTGTCGCCGCTAGATCATTCCATGTACAGAACGCCGCCCCCCCT CCACCGGTTGCGCGTGGTGTGAGAAGCCCTTTGCATCACTGCTGTTTCTT TTGGCGGGGCCCACACGCGTGTGTGGATGTTGTTGAAGCTGGCACGGTGA GAATTTCGTTTTCTCCTTTTCTCTGGCTGCGCCAGGACCACAAGCCTAGG TCAACGGTGTAGGTCTGTCGCATTTTCGGTCCACGCGCCTCTTCGCTGCT CATGTACCCGATCAACAATCAGTGGCGTTATTTGATTCTCCTCATCTGTG CTTGTGTGCATGTGTTAACATTCTGGCACAGAGTGTCGACCGATCGACTG GGATACGTGTTACGTGGGAAAGAGTCCGGACGCCTGCCACCGCGATGTCG GTCTTTCCAATGGTGGCACAAGCCACAGGGAGGCTGTGCACGCAGACACA TCGAACCTCGCTCAGCAATAGGTGCGCACAAATCGCCCTCCTCAGGCAGC AGAGGGGGTGCATTATGTTGGGGATTGCGCTCGGAGAGATTTTCTCGAAG GCCTGATCCTTCGTAACCTTCCGGTTTGTTGTCAAAATGGCGCAAGAACT GTATTTGGGCGAGAGGCCTGTGATCTGTAGATAGCGAGTGAGTATCTTTA CGACATGTGTGCTAGGGACGACCACGACACGTATTTTCTTCCTTGATAGT TGAAATATAATGTTTTTTGAGAAGTATTGAGACGGGGCTGTACAGGGGAC GACGGGGAGAGGCGGGGCGATGCGGCGGGAAATCGGGGTGGGGAGGTAGG GAAGCGTGGCGTTGAGGCCCGAGTAATTAAGGAAGACTGCGTGCAACACG AAAGCGGGTTGACGGGAATGCAAAAGGGAGGCACTTTTTCCTCCCCGTCC TCCCGCGGTCGTTCGTTTTGTCGGAGTTGTTGAAACCCGTTGTGCGATCG CGAATACCTTCGGCACAGCAAGGCTATAGGGGTGTTTCTTTTTTTTGGTG TTTGTTGTGGGTATGAGTAATCAGAAGGCATCCACCTTCGCGCTCGCCAC AAAAATGGCAACCAAGAAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1624:2485..6353+

>mRNA_Ecto-sp13_S_contig1624.4525.1 ID=mRNA_Ecto-sp13_S_contig1624.4525.1|Name=mRNA_Ecto-sp13_S_contig1624.4525.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1455bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1624:2485..6353+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCAAAAGATCGTAGTAGGAAGGATAACCAGGAGGTTGCTGCTCAAGT
CGACGTCGGAAGGTACCTCCACCTCGCCTCTGGATTAGGGCACGACCTCG
TCGTGTCGCTCTTGCTCGAGCGTGGCGCCGACCCCAACATCGATAGTAAC
GGCGATGGTATGACACCCCTTTTGTTGGCAGCTAAGGAAGGCCATGTTCG
TGTGGTAGTAGCCCTGCTATCGGATGCTCGGGTCGATGTCGGACAACGAC
ACGGCTCGGGCGGTCGCTCGGCCCTTGACTTGGCAGCGATTGGAGGGCAT
GCCGATGTCATTTCGGCGATTGTCGAGCGCCAGCCGGACGTCCTTGATTC
GGCGTCTGATGAGACTGGGTTTTCCGCCTTACACCACGCCGCCAATCACG
ATGCGGTGGATTCCATCGAGGCCCTCGTAAAAGCTGGGGCAAGCCTTGAA
AACCGAGACGCCGAAGGCTTCACACCCCTCCGGGTCGCCGCTGGTTGTGC
GTCTGAGGCCGCCTTGCTAGCTCTACTTCGACACGGCGCTGACAAAGAGA
GTACGGGGGTGGACGGGTTAACCCCACTGCAGGATGCAATGGAGAATAAT
CTCTGGGGAATAGCAACTGCACTTATGGCCGCCGGTGCTGATGTCAATGT
TCGGGGCGGGTCAAATGGGTACTCCCCGCTAGATTGTGCCGTCCGGAGTG
ATGGTATGGACCTCACGCGCCAGGTGTTGCAGCGCGGTGGGATTGCAACG
GAGTCAGCTTCAGATGGATGCACAGCATTGCATTGGGCGGGATGGAACAT
GAACGCGTCCGCAATCGATCTCCTCGTAGGAGCCGGCGCCAACCTTGAGG
CTAAGCTTGCAGACGAGGAAGTCACTCCTCTCCATCTCGCTGCGCGGCAG
GCCGGGAATGCAGCCGTGATCGAGGCCCTTGCAAGGCACGGTGCCGATGT
TCATGCTCAAGAAACTCCTTCGGGGCAGACACCTTTGCACAACGCTGCTC
AAAACTGCGCCATCGAATCTTCGTGGGAGACGGTGGACGCGCTGTTGAAG
GCCGGGGCCGGCGAGACTAGACTGGATTGTCAAGGCCAAACTCCCCTAGA
TCTTCTCGAAGCCAGGATTGCTGCCGGCGATCTTGTGGGTGCGTCGGCGA
ACGCAGCCGAGCACACCCGGAGCATTCTGGTGAATGCCCCGAAGGACAGG
GCGCAGAGGGCTTGGAGTCGACGATCTTTCTTCGTTATGTGTCGCGCTCA
CCCTGACAGAGTGCGACTGGCTGTTGCGGACGACACTTCAACCAGCCCCA
GTACGAAGAAGTTGTCAACAGCATCTACAGGGGTTGGTAGCGGGCGGCGC
GGGACCAACCGGGACAGTAGTGCGGATAATTTCCAGCGTGCCATGAGGAG
CTTGATGCTGCTGAAGGAGGATGGACTATTCCGGAAGATCGTGGCGTTCC
TGTGA
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