mRNA_Ecto-sp13_S_contig16175.4498.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A6H5L5D5_9PHAE (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5D5_9PHAE) HSP 1 Score: 255 bits (651), Expect = 4.170e-83 Identity = 119/130 (91.54%), Postives = 122/130 (93.85%), Query Frame = 1
Query: 4 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 393
A RGIFLFNKLSQISEWKKDHRWK+DQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDL SLK+ + G
Sbjct: 22 AQGRGIFLFNKLSQISEWKKDHRWKADQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLQSLKMFLTLKHG 151
BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: D8LLT6_ECTSI (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT6_ECTSI) HSP 1 Score: 254 bits (648), Expect = 4.230e-81 Identity = 118/130 (90.77%), Postives = 122/130 (93.85%), Query Frame = 1
Query: 4 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 393
A RGIFLFNKLSQISEWKKDHRWK+DQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKK+EDYDKEVGCKWDL SLK+ + G
Sbjct: 142 AQGRGIFLFNKLSQISEWKKDHRWKADQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKAEDYDKEVGCKWDLQSLKMFLTLKHG 271
BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A835ZCT8_9STRA (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT8_9STRA) HSP 1 Score: 201 bits (511), Expect = 2.570e-61 Identity = 91/130 (70.00%), Postives = 106/130 (81.54%), Query Frame = 1
Query: 4 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 393
A RGIFLFNKLSQIS+WKKDH W+ DQPQAE+YIAQRY+ NP +GGKKFDLRLYVLVTSF+PL VWLY GFARFSG RY +R ++ N YVHLTNVAIQKK+E YD+ VGCK LH+LK+++ G
Sbjct: 115 AQGRGIFLFNKLSQISDWKKDHNWRPDQPQAESYIAQRYIMNPCTVGGKKFDLRLYVLVTSFSPLAVWLYGAGFARFSGQRYTQERGSMGNVYVHLTNVAIQKKAEGYDRGVGCKLALHALKLLLTARHG 244
BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A7S3D9R4_9EUKA (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D9R4_9EUKA) HSP 1 Score: 187 bits (475), Expect = 1.950e-58 Identity = 82/130 (63.08%), Postives = 100/130 (76.92%), Query Frame = 1
Query: 4 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 393
A +GIFLFNKLSQISEW+KDH+WK+D PQAE YI QRY+ENPYLIGGKKFDLR+YV+VTS+NPLTV+LY GF RFS R+ + + N ++HLTNVAIQK + +Y GCKW L SLK+ + G
Sbjct: 32 AQGKGIFLFNKLSQISEWRKDHKWKADSPQAETYIVQRYIENPYLIGGKKFDLRIYVMVTSYNPLTVYLYRSGFGRFSNERFSMRKDEIQNNFIHLTNVAIQKTNPEYQAGTGCKWSLRSLKLYLMSKHG 161
BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A7S3G4H8_9EUKA (Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G4H8_9EUKA) HSP 1 Score: 187 bits (475), Expect = 5.290e-57 Identity = 82/130 (63.08%), Postives = 100/130 (76.92%), Query Frame = 1
Query: 4 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 393
A +GIFLFNKLSQISEW+KDH+WK+D PQAE YI QRY+ENPYLIGGKKFDLR+YV+VTS+NPLTV+LY GF RFS R+ + + N ++HLTNVAIQK + +Y GCKW L SLK+ + G
Sbjct: 140 AQGKGIFLFNKLSQISEWRKDHKWKADSPQAETYIVQRYIENPYLIGGKKFDLRIYVMVTSYNPLTVYLYRSGFGRFSNERFSMRKDEIQNNFIHLTNVAIQKTNPEYQAGTGCKWSLRSLKLYLMSKHG 269
BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A7S3DBK5_9EUKA (Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DBK5_9EUKA) HSP 1 Score: 187 bits (475), Expect = 1.070e-56 Identity = 82/130 (63.08%), Postives = 100/130 (76.92%), Query Frame = 1
Query: 4 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 393
A +GIFLFNKLSQISEW+KDH+WK+D PQAE YI QRY+ENPYLIGGKKFDLR+YV+VTS+NPLTV+LY GF RFS R+ + + N ++HLTNVAIQK + +Y GCKW L SLK+ + G
Sbjct: 32 AQGKGIFLFNKLSQISEWRKDHKWKADSPQAETYIVQRYIENPYLIGGKKFDLRIYVMVTSYNPLTVYLYRSGFGRFSNERFSMRKDEIQNNFIHLTNVAIQKTNPEYQAGTGCKWSLRSLKLYLMSKHG 161
BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A0M0JEH9_9EUKA (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JEH9_9EUKA) HSP 1 Score: 189 bits (480), Expect = 1.350e-56 Identity = 83/131 (63.36%), Postives = 104/131 (79.39%), Query Frame = 1
Query: 4 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFGL 396
A RGIFLFNKLSQI++WKKDH+WKSD+PQAE Y+ QRY+ENP L+GGKKFD+R+YVLVT+++PLTV+LY GFARFS R+ T L++ YVHLTN AIQK YDK+ GCKW L LK+ + G +G+
Sbjct: 143 AQGRGIFLFNKLSQINDWKKDHKWKSDEPQAEIYVVQRYIENPLLVGGKKFDMRIYVLVTAYSPLTVYLYRSGFARFSLYRFETTAKNLSDTYVHLTNAAIQKTGPAYDKQAGCKWSLRHLKLYLMGKYGM 273
BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A7S3G4H5_9EUKA (Tubulin--tyrosine ligase-like protein 9 n=6 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G4H5_9EUKA) HSP 1 Score: 187 bits (475), Expect = 1.720e-55 Identity = 82/130 (63.08%), Postives = 100/130 (76.92%), Query Frame = 1
Query: 4 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 393
A +GIFLFNKLSQISEW+KDH+WK+D PQAE YI QRY+ENPYLIGGKKFDLR+YV+VTS+NPLTV+LY GF RFS R+ + + N ++HLTNVAIQK + +Y GCKW L SLK+ + G
Sbjct: 140 AQGKGIFLFNKLSQISEWRKDHKWKADSPQAETYIVQRYIENPYLIGGKKFDLRIYVMVTSYNPLTVYLYRSGFGRFSNERFSMRKDEIQNNFIHLTNVAIQKTNPEYQAGTGCKWSLRSLKLYLMSKHG 269
BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A7S0PTM5_9EUKA (Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PTM5_9EUKA) HSP 1 Score: 186 bits (473), Expect = 3.750e-55 Identity = 84/131 (64.12%), Postives = 100/131 (76.34%), Query Frame = 1
Query: 4 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFGL 396
A +GIFLF+KLSQI+EWKKDH+WK D PQAE Y+ QRY+ENP LIGGKKFDLR+Y LVTSF PL V+LY GFARFS RY T++ L + YVHLTNVA+QK YD GCKW L +LK+ + G FG+
Sbjct: 143 AQGKGIFLFSKLSQITEWKKDHKWKPDSPQAETYVVQRYLENPMLIGGKKFDLRIYALVTSFMPLVVYLYRSGFARFSSFRYNTNQKNLGDTYVHLTNVAVQKTGPGYDAGAGCKWPLRNLKLYLIGKFGV 273
BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Match: A0A7S3LN32_9STRA (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LN32_9STRA) HSP 1 Score: 181 bits (458), Expect = 1.840e-53 Identity = 79/130 (60.77%), Postives = 107/130 (82.31%), Query Frame = 1
Query: 4 APNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLHSLKVMIAGSFG 393
A +GIFLFNKLSQIS+WKKDH+WKSD PQAE+Y+AQRYV+ PY +GGKKFD+RLYVLVTSF+PLTVW++ GFARF+ TRY +D++ + + Y+HLTN +IQKK++D+++E+ KW + LK+ + G
Sbjct: 69 AQGKGIFLFNKLSQISDWKKDHKWKSDAPQAESYVAQRYVDRPYTVGGKKFDMRLYVLVTSFSPLTVWMHRNGFARFTNTRYNSDKSNINDSYMHLTNHSIQKKAKDHNQEL--KWGVDGLKLFLMSRHG 196 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16175.4498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16175.4498.1 >prot_Ecto-sp13_S_contig16175.4498.1 ID=prot_Ecto-sp13_S_contig16175.4498.1|Name=mRNA_Ecto-sp13_S_contig16175.4498.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=132bp AAPNRGIFLFNKLSQISEWKKDHRWKSDQPQAEAYIAQRYVENPYLIGGKback to top mRNA from alignment at Ecto-sp13_S_contig16175:708..2118+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16175.4498.1 ID=mRNA_Ecto-sp13_S_contig16175.4498.1|Name=mRNA_Ecto-sp13_S_contig16175.4498.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1411bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16175:708..2118+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16175:708..2118+ >mRNA_Ecto-sp13_S_contig16175.4498.1 ID=mRNA_Ecto-sp13_S_contig16175.4498.1|Name=mRNA_Ecto-sp13_S_contig16175.4498.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=396bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16175:708..2118+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |