prot_Ecto-sp13_S_contig16174.4497.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16174.4497.1
Unique Nameprot_Ecto-sp13_S_contig16174.4497.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length207
Homology
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: D7FMZ6_ECTSI (NnrU domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ6_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 2.630e-86
Identity = 139/143 (97.20%), Postives = 141/143 (98.60%), Query Frame = 0
Query:   65 MGTRESRHRGSSVNPLAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 207
            M TRE RHRGSSVNPLAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKP+TGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEEL+GARAWRVLFGVVSLPLAVTAVAY
Sbjct:    1 MSTRE-RHRGSSVNPLAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPETGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLAVTAVAY 142          
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A6H5L307_9PHAE (NnrU domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L307_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 8.280e-80
Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0
Query:   82 MSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 207
            MSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKP+TGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY
Sbjct:    1 MSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPETGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 126          
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A835Z2B9_9STRA (NnrU protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B9_9STRA)

HSP 1 Score: 174 bits (442), Expect = 7.570e-50
Identity = 83/135 (61.48%), Postives = 108/135 (80.00%), Query Frame = 0
Query:   73 RGSSVNPLAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 207
            R S+ + L +S  ++E+LQ  SGL+GEDAA FS +EQ L SW +F  V   V+ AL+YLW+   TGYGDDF+R LE +SGG+S++T+ L+LG+FAVAHSGLASLRPKGEE++GARAWRVLFGVVSLPLA++ + Y
Sbjct:   52 RRSTSSALQLSTRDIEELQDASGLIGEDAAAFSLQEQKLASWISFGGVFTVVMAALWYLWINESTGYGDDFIRALESVSGGNSSVTIVLLLGIFAVAHSGLASLRPKGEEIIGARAWRVLFGVVSLPLALSCLVY 186          
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A7S3YAC1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAC1_HETAK)

HSP 1 Score: 144 bits (362), Expect = 6.280e-38
Identity = 65/112 (58.04%), Postives = 86/112 (76.79%), Query Frame = 0
Query:   96 LVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 207
            LVGEDAAVF F  Q ++SWG F  ++ +VL  LY  W+K DTG+GDD++R LE ++GGDS + + ++L +F V HSGLASLR KGE ++GARAWRVLF + SLPLA++AV Y
Sbjct:   81 LVGEDAAVFEFSNQKIQSWGIFSVLVTSVLGLLYVTWIKADTGFGDDYIRLLESIAGGDSHVVMGMLLTIFGVVHSGLASLRTKGESIIGARAWRVLFALASLPLALSAVVY 192          
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A0G4ECX7_VITBC (NnrU domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ECX7_VITBC)

HSP 1 Score: 137 bits (346), Expect = 1.210e-35
Identity = 67/113 (59.29%), Postives = 86/113 (76.11%), Query Frame = 0
Query:   95 GLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 207
            G VGEDAA F  EEQSLKSWG F  +L TVL ALY  W+ P+TG+G D++R LE  S     + +T ++G+FAVAHSGLASLRP+ E ++GARAWRV+F ++SLPLA +A+AY
Sbjct:   71 GFVGEDAARFDLEEQSLKSWGIFSVLLVTVLGALYVSWISPETGFGKDYLRLLESTSDSPEVV-MTELMGIFAVAHSGLASLRPRMEGIIGARAWRVVFALMSLPLAFSAIAY 182          
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A7S3VSM6_DUNTE (Hypothetical protein n=2 Tax=Dunaliella TaxID=3044 RepID=A0A7S3VSM6_DUNTE)

HSP 1 Score: 135 bits (340), Expect = 1.220e-34
Identity = 66/128 (51.56%), Postives = 88/128 (68.75%), Query Frame = 0
Query:   80 LAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 207
            + + A+  E+  R +GLVGEDAA F   +QS KSW  F  +L  VL  +Y +W++P  G  DDF+  +EG S  +   T+ LIL VFAV HSGLA LRPKGE+L+GARA+RV+F +VSLPLA+ A+ Y
Sbjct:   72 VCVRAASDEESPRPAGLVGEDAAAFDVSQQSTKSWALFTGLLTGVLGLIYLVWIQPGAGLADDFLGLVEGFSNNNPEATILLILFVFAVVHSGLAGLRPKGEQLIGARAYRVIFALVSLPLAIVAIVY 199          
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A8J4AM61_9CHLO (NnrU domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4AM61_9CHLO)

HSP 1 Score: 134 bits (337), Expect = 2.480e-34
Identity = 63/117 (53.85%), Postives = 88/117 (75.21%), Query Frame = 0
Query:   91 QRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 207
            + Q  ++GEDAAVF  E+Q++KSW  F  +L TVL ALY +W++P  G  DD++  ++ ++ G S IT+TLIL  FA+AHSGLA LRP GEE++GARA+RV+F +VSLPLA+ A+ Y
Sbjct:   68 ETQQKMIGEDAAVFDIEKQNIKSWALFTVLLSTVLGALYLVWIQPGVGLADDYLAAIQSIA-GSSEITITLILLFFAIAHSGLAGLRPYGEEVIGARAYRVIFALVSLPLAIVAIVY 183          
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A2K3CNC7_CHLRE (NnrU domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3CNC7_CHLRE)

HSP 1 Score: 131 bits (329), Expect = 2.940e-33
Identity = 67/112 (59.82%), Postives = 84/112 (75.00%), Query Frame = 0
Query:   96 LVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 207
            LVGED+A F   +QS KSW  F+ +L TVL ALY +W++P TG  DDF+  LE L+ G S  T+ LIL VFA+AHSGLA LRPKGEELVG RA+RV+F +VSLPLA+ A+ +
Sbjct:   68 LVGEDSAAFDLAKQSPKSWALFVVLLSTVLGALYVVWIQPGTGLADDFLGALESLA-GSSEATMALILLVFAIAHSGLAGLRPKGEELVGPRAYRVVFALVSLPLALLAIVF 178          
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A150G3T2_GONPE (NnrU domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G3T2_GONPE)

HSP 1 Score: 135 bits (340), Expect = 4.090e-33
Identity = 68/128 (53.12%), Postives = 93/128 (72.66%), Query Frame = 0
Query:   80 LAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 207
            +A  A++ E       LVGEDAA F  E+QSL+SWG F+A+L  VL ALY +W++P  G  DD++  ++ L+ G S +T+TLIL +FA+AHSGLA LRP GEE++G RA+RV+F +VSLPLAV A+ Y
Sbjct:  920 VACRAAQQEPEATTPQLVGEDAASFDLEKQSLQSWGLFVALLSVVLGALYVVWIQPGFGLADDYLAAIQSLA-GSSEVTITLILLIFAIAHSGLAGLRPYGEEIIGPRAYRVMFALVSLPLAVVAIVY 1046          
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A250WR75_9CHLO (NnrU domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WR75_9CHLO)

HSP 1 Score: 129 bits (325), Expect = 1.340e-32
Identity = 68/132 (51.52%), Postives = 89/132 (67.42%), Query Frame = 0
Query:   76 SVNPLAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 207
            S N    +ASE    Q  + LVGEDAA F  + QSLKSWG F  +L  VL  LY +W++P TG  DD+V+ ++ LS  +   T+TLIL VFA+ HSGLA LRP+ E+L+GARA+RV+F + SLPLA  A+ Y
Sbjct:   49 SFNLTCRAASEEPQNQLTTSLVGEDAAAFDVQRQSLKSWGLFFGLLTGVLGLLYLVWIQPGTGLADDYVQTIKTLSNDNPEGTITLILLVFAIFHSGLAGLRPQAEKLIGARAYRVIFALGSLPLATVALVY 180          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMZ6_ECTSI2.630e-8697.20NnrU domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L307_9PHAE8.280e-8099.21NnrU domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835Z2B9_9STRA7.570e-5061.48NnrU protein-domain-containing protein n=1 Tax=Tri... [more]
A0A7S3YAC1_HETAK6.280e-3858.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4ECX7_VITBC1.210e-3559.29NnrU domain-containing protein n=2 Tax=Vitrella br... [more]
A0A7S3VSM6_DUNTE1.220e-3451.56Hypothetical protein n=2 Tax=Dunaliella TaxID=3044... [more]
A0A8J4AM61_9CHLO2.480e-3453.85NnrU domain-containing protein n=2 Tax=Volvox TaxI... [more]
A0A2K3CNC7_CHLRE2.940e-3359.82NnrU domain-containing protein n=3 Tax=Chlamydomon... [more]
A0A150G3T2_GONPE4.090e-3353.13NnrU domain-containing protein n=1 Tax=Gonium pect... [more]
A0A250WR75_9CHLO1.340e-3251.52NnrU domain-containing protein n=1 Tax=Chlamydomon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009915NnrU domainPFAMPF07298NnrUcoord: 161..206
e-value: 1.5E-5
score: 24.6
NoneNo IPR availablePANTHERPTHR35988FAMILY NOT NAMEDcoord: 73..207
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..113
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 134..153
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 177..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..206
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 207..207
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..176
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.809
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 146..168
NoneNo IPR availableTMHMMTMhelixcoord: 183..205
NoneNo IPR availableTMHMMTMhelixcoord: 114..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16174contigEcto-sp13_S_contig16174:1..2129 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16174.4497.1mRNA_Ecto-sp13_S_contig16174.4497.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16174 1..2129 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16174.4497.1 ID=prot_Ecto-sp13_S_contig16174.4497.1|Name=mRNA_Ecto-sp13_S_contig16174.4497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=207bp
MLHRARLAPVLLLLITPCASLVGVGPNRIALRSVGYSRGCSRAGTSRVLP
CELARAGKARNGFTMGTRESRHRGSSVNPLAMSASELEDLQRQSGLVGED
AAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGL
SGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPL
AVTAVAY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009915NnrU_dom