mRNA_Ecto-sp13_S_contig16174.4497.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: D7FMZ6_ECTSI (NnrU domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ6_ECTSI) HSP 1 Score: 267 bits (683), Expect = 2.630e-86 Identity = 139/143 (97.20%), Postives = 141/143 (98.60%), Query Frame = 1
Query: 193 MGTRESRHRGSSVNPLAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 621
M TRE RHRGSSVNPLAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKP+TGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEEL+GARAWRVLFGVVSLPLAVTAVAY
Sbjct: 1 MSTRE-RHRGSSVNPLAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPETGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLAVTAVAY 142
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A6H5L307_9PHAE (NnrU domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L307_9PHAE) HSP 1 Score: 244 bits (622), Expect = 8.280e-80 Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 1
Query: 244 MSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 621
MSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKP+TGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY
Sbjct: 1 MSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPETGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 126
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A835Z2B9_9STRA (NnrU protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B9_9STRA) HSP 1 Score: 174 bits (442), Expect = 7.570e-50 Identity = 83/135 (61.48%), Postives = 108/135 (80.00%), Query Frame = 1
Query: 217 RGSSVNPLAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 621
R S+ + L +S ++E+LQ SGL+GEDAA FS +EQ L SW +F V V+ AL+YLW+ TGYGDDF+R LE +SGG+S++T+ L+LG+FAVAHSGLASLRPKGEE++GARAWRVLFGVVSLPLA++ + Y
Sbjct: 52 RRSTSSALQLSTRDIEELQDASGLIGEDAAAFSLQEQKLASWISFGGVFTVVMAALWYLWINESTGYGDDFIRALESVSGGNSSVTIVLLLGIFAVAHSGLASLRPKGEEIIGARAWRVLFGVVSLPLALSCLVY 186
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A7S3YAC1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAC1_HETAK) HSP 1 Score: 144 bits (362), Expect = 6.280e-38 Identity = 65/112 (58.04%), Postives = 86/112 (76.79%), Query Frame = 1
Query: 286 LVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 621
LVGEDAAVF F Q ++SWG F ++ +VL LY W+K DTG+GDD++R LE ++GGDS + + ++L +F V HSGLASLR KGE ++GARAWRVLF + SLPLA++AV Y
Sbjct: 81 LVGEDAAVFEFSNQKIQSWGIFSVLVTSVLGLLYVTWIKADTGFGDDYIRLLESIAGGDSHVVMGMLLTIFGVVHSGLASLRTKGESIIGARAWRVLFALASLPLALSAVVY 192
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A0G4ECX7_VITBC (NnrU domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ECX7_VITBC) HSP 1 Score: 137 bits (346), Expect = 1.210e-35 Identity = 67/113 (59.29%), Postives = 86/113 (76.11%), Query Frame = 1
Query: 283 GLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 621
G VGEDAA F EEQSLKSWG F +L TVL ALY W+ P+TG+G D++R LE S + +T ++G+FAVAHSGLASLRP+ E ++GARAWRV+F ++SLPLA +A+AY
Sbjct: 71 GFVGEDAARFDLEEQSLKSWGIFSVLLVTVLGALYVSWISPETGFGKDYLRLLESTSDSPEVV-MTELMGIFAVAHSGLASLRPRMEGIIGARAWRVVFALMSLPLAFSAIAY 182
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A7S3VSM6_DUNTE (Hypothetical protein n=2 Tax=Dunaliella TaxID=3044 RepID=A0A7S3VSM6_DUNTE) HSP 1 Score: 135 bits (340), Expect = 1.220e-34 Identity = 66/128 (51.56%), Postives = 88/128 (68.75%), Query Frame = 1
Query: 238 LAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 621
+ + A+ E+ R +GLVGEDAA F +QS KSW F +L VL +Y +W++P G DDF+ +EG S + T+ LIL VFAV HSGLA LRPKGE+L+GARA+RV+F +VSLPLA+ A+ Y
Sbjct: 72 VCVRAASDEESPRPAGLVGEDAAAFDVSQQSTKSWALFTGLLTGVLGLIYLVWIQPGAGLADDFLGLVEGFSNNNPEATILLILFVFAVVHSGLAGLRPKGEQLIGARAYRVIFALVSLPLAIVAIVY 199
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A8J4AM61_9CHLO (NnrU domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4AM61_9CHLO) HSP 1 Score: 134 bits (337), Expect = 2.480e-34 Identity = 63/117 (53.85%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 271 QRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 621
+ Q ++GEDAAVF E+Q++KSW F +L TVL ALY +W++P G DD++ ++ ++ G S IT+TLIL FA+AHSGLA LRP GEE++GARA+RV+F +VSLPLA+ A+ Y
Sbjct: 68 ETQQKMIGEDAAVFDIEKQNIKSWALFTVLLSTVLGALYLVWIQPGVGLADDYLAAIQSIA-GSSEITITLILLFFAIAHSGLAGLRPYGEEVIGARAYRVIFALVSLPLAIVAIVY 183
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A2K3CNC7_CHLRE (NnrU domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3CNC7_CHLRE) HSP 1 Score: 131 bits (329), Expect = 2.940e-33 Identity = 67/112 (59.82%), Postives = 84/112 (75.00%), Query Frame = 1
Query: 286 LVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 621
LVGED+A F +QS KSW F+ +L TVL ALY +W++P TG DDF+ LE L+ G S T+ LIL VFA+AHSGLA LRPKGEELVG RA+RV+F +VSLPLA+ A+ +
Sbjct: 68 LVGEDSAAFDLAKQSPKSWALFVVLLSTVLGALYVVWIQPGTGLADDFLGALESLA-GSSEATMALILLVFAIAHSGLAGLRPKGEELVGPRAYRVVFALVSLPLALLAIVF 178
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A150G3T2_GONPE (NnrU domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G3T2_GONPE) HSP 1 Score: 135 bits (340), Expect = 4.090e-33 Identity = 68/128 (53.12%), Postives = 93/128 (72.66%), Query Frame = 1
Query: 238 LAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 621
+A A++ E LVGEDAA F E+QSL+SWG F+A+L VL ALY +W++P G DD++ ++ L+ G S +T+TLIL +FA+AHSGLA LRP GEE++G RA+RV+F +VSLPLAV A+ Y
Sbjct: 920 VACRAAQQEPEATTPQLVGEDAASFDLEKQSLQSWGLFVALLSVVLGALYVVWIQPGFGLADDYLAAIQSLA-GSSEVTITLILLIFAIAHSGLAGLRPYGEEIIGPRAYRVMFALVSLPLAVVAIVY 1046
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Match: A0A250WR75_9CHLO (NnrU domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WR75_9CHLO) HSP 1 Score: 129 bits (325), Expect = 1.340e-32 Identity = 68/132 (51.52%), Postives = 89/132 (67.42%), Query Frame = 1
Query: 226 SVNPLAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPDTGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELVGARAWRVLFGVVSLPLAVTAVAY 621
S N +ASE Q + LVGEDAA F + QSLKSWG F +L VL LY +W++P TG DD+V+ ++ LS + T+TLIL VFA+ HSGLA LRP+ E+L+GARA+RV+F + SLPLA A+ Y
Sbjct: 49 SFNLTCRAASEEPQNQLTTSLVGEDAAAFDVQRQSLKSWGLFFGLLTGVLGLLYLVWIQPGTGLADDYVQTIKTLSNDNPEGTITLILLVFAIFHSGLAGLRPQAEKLIGARAYRVIFALGSLPLATVALVY 180 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16174.4497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16174.4497.1 >prot_Ecto-sp13_S_contig16174.4497.1 ID=prot_Ecto-sp13_S_contig16174.4497.1|Name=mRNA_Ecto-sp13_S_contig16174.4497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=207bp MLHRARLAPVLLLLITPCASLVGVGPNRIALRSVGYSRGCSRAGTSRVLPback to top mRNA from alignment at Ecto-sp13_S_contig16174:1..2129- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16174.4497.1 ID=mRNA_Ecto-sp13_S_contig16174.4497.1|Name=mRNA_Ecto-sp13_S_contig16174.4497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2129bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16174:1..2129- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16174:1..2129- >mRNA_Ecto-sp13_S_contig16174.4497.1 ID=mRNA_Ecto-sp13_S_contig16174.4497.1|Name=mRNA_Ecto-sp13_S_contig16174.4497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=621bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16174:1..2129- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |