prot_Ecto-sp13_S_contig1616.4489.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1616.4489.1 vs. uniprot
Match: A0A6H5JGQ1_9PHAE (Transcription initiation factor TFIID subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ1_9PHAE) HSP 1 Score: 834 bits (2155), Expect = 8.090e-302 Identity = 423/444 (95.27%), Postives = 425/444 (95.72%), Query Frame = 0
Query: 1 MTSPAHPSPGSNANMDSPAPMDVADSSDDDNYDGHVESATVEAHRQRKREEHAKVICVEVEWELLHPRSGVVFKAAREGFSANHMYTTYSHAPMDMDGPRCWFPCVDHASILISYDVMVRVASPKITAAFNGRLLESITLDVDDDDDGDAGVNGGTDGMAVGKGTSYSTCYRFSTETLTAARAVGLAVGRFAAWDVPQSPRVKGLVLRAASAGGGGRTGTMKSERRRAVDNSLIAAAGSLLAHVPAAVSFLEDWLKADYPFKRCTQVFVEGLPDVFAPFGSLCLLKAELLCTEDDRIPDGDLPGDARLSAVEVLLYGWVSTALRLEGGKHRWLVHGIAGHLLTKFAAELRGEEEKQHRLWCAVQKAVALDCDLGCPSISPPTADLYIPDAIDPATAYYARLKAVLILHMAEVKVQPADMQDALGSVMRPIALHVREEKADLALR 444
M SPAHPSPGSNANMDSPAPMDVADSSDDDNYDGHVESATVEAHRQRKREEHAKVICVEVEWELLHPRSGVVFKAAREGFSANHMYTTYSHAPMDMDGPRCWFPCVDHASILISYDV VRVASPKITAAFNGRLLES TLD DD NGGTDGMAV K TSYSTCYRFSTETLTAARAVGLAVGRFAAWDVP SPRVKGLVL+AASAGGGGR GTMKSERRRAVDNSLIAAAGSLLAHVPAAVSFLEDWLKADYPFKRCTQVFVEGLPDVFAPFGSLCLLKAELLCTEDDRIPDGDLPGDARLSAVEVLLYGWVSTALRLEGGKHRWLVHGIAGHLLTKFAAELRGEEEKQHRLW AVQKAVALDCDLGCPSISPPT DLYIPDAIDPATAYYARLKAVLILHMAEVKVQPADMQDALGSVMRPIALHVR+ KADLALR
Sbjct: 176 MMSPAHPSPGSNANMDSPAPMDVADSSDDDNYDGHVESATVEAHRQRKREEHAKVICVEVEWELLHPRSGVVFKAAREGFSANHMYTTYSHAPMDMDGPRCWFPCVDHASILISYDVTVRVASPKITAAFNGRLLESTTLDDDDGXXXXXXANGGTDGMAVRKRTSYSTCYRFSTETLTAARAVGLAVGRFAAWDVPHSPRVKGLVLKAASAGGGGRAGTMKSERRRAVDNSLIAAAGSLLAHVPAAVSFLEDWLKADYPFKRCTQVFVEGLPDVFAPFGSLCLLKAELLCTEDDRIPDGDLPGDARLSAVEVLLYGWVSTALRLEGGKHRWLVHGIAGHLLTKFAAELRGEEEKQHRLWRAVQKAVALDCDLGCPSISPPTPDLYIPDAIDPATAYYARLKAVLILHMAEVKVQPADMQDALGSVMRPIALHVRDAKADLALR 619
BLAST of mRNA_Ecto-sp13_S_contig1616.4489.1 vs. uniprot
Match: D7G4X2_ECTSI (Transcription initiation factor TFIID subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X2_ECTSI) HSP 1 Score: 858 bits (2218), Expect = 1.440e-299 Identity = 433/444 (97.52%), Postives = 434/444 (97.75%), Query Frame = 0
Query: 1 MTSPAHPSPGSNANMDSPAPMDVADSSDDDNYDGHVESATVEAHRQRKREEHAKVICVEVEWELLHPRSGVVFKAAREGFSANHMYTTYSHAPMDMDGPRCWFPCVDHASILISYDVMVRVASPKITAAFNGRLLESITLDVDDDDDGDAGVNGGTDGMAVGKGTSYSTCYRFSTETLTAARAVGLAVGRFAAWDVPQSPRVKGLVLRAASAGGGGRTGTMKSERRRAVDNSLIAAAGSLLAHVPAAVSFLEDWLKADYPFKRCTQVFVEGLPDVFAPFGSLCLLKAELLCTEDDRIPDGDLPGDARLSAVEVLLYGWVSTALRLEGGKHRWLVHGIAGHLLTKFAAELRGEEEKQHRLWCAVQKAVALDCDLGCPSISPPTADLYIPDAIDPATAYYARLKAVLILHMAEVKVQPADMQDALGSVMRPIALHVREEKADLALR 444
M SPAHPSPGSNANMDSPAPMDVADSSDDDNYDGHVESATVEAHRQRKREEHAKVICVEVEWELLHPRSGVVFKAAREGFSANHMYTTYSHAPMDMDGPRCWFPCVDHASILISYDV VRVASPKITAAFNGRLLESITLD D GD GVNGGTDGMAVGK TSYSTCYRFSTETLTAARAVGLAVGRFAAWDVPQSPRVKGLVLRAASAGGGGR+GTMKSERRRAVDNSLIA AGSLLAHVPAAVSFLEDWLKADYPFKRCTQVFVEGLPDVFAPFGSLCLLKAELLCTEDDRIPDGDLPGDARLSAVEVLLYGWVSTALRLEGGKHRWLVHGIAGHLLTKFAAELRGEEEKQHRLWCAVQKAVALDCDLGCPSISPPTADLYIPDAIDPATAYYARLKAVLILHMAEVKVQPADMQDALGSVMRPIALHVREEKADLALR
Sbjct: 179 MMSPAHPSPGSNANMDSPAPMDVADSSDDDNYDGHVESATVEAHRQRKREEHAKVICVEVEWELLHPRSGVVFKAAREGFSANHMYTTYSHAPMDMDGPRCWFPCVDHASILISYDVTVRVASPKITAAFNGRLLESITLDDDXXXXGDVGVNGGTDGMAVGKRTSYSTCYRFSTETLTAARAVGLAVGRFAAWDVPQSPRVKGLVLRAASAGGGGRSGTMKSERRRAVDNSLIAGAGSLLAHVPAAVSFLEDWLKADYPFKRCTQVFVEGLPDVFAPFGSLCLLKAELLCTEDDRIPDGDLPGDARLSAVEVLLYGWVSTALRLEGGKHRWLVHGIAGHLLTKFAAELRGEEEKQHRLWCAVQKAVALDCDLGCPSISPPTADLYIPDAIDPATAYYARLKAVLILHMAEVKVQPADMQDALGSVMRPIALHVREEKADLALR 622
BLAST of mRNA_Ecto-sp13_S_contig1616.4489.1 vs. uniprot
Match: A0A836CI26_9STRA (Transcription initiation factor TFIID subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI26_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.660e-17 Identity = 82/293 (27.99%), Postives = 115/293 (39.25%), Query Frame = 0
Query: 60 VEWELLHPRSGVVF--KAAREGFSAN----HMYTTYSHAPMDMDGPRCWFPCVDHASILISYDVMVRVAS-----------PKITAAFNGRLLESITLDVDDDDDGDAGVNGGTDGMAVGKGTSYSTCYRFSTETLTAARAVGLAVGRFAAWDVPQSPRVKGLVLRAASAGGGGRTGTMKSERRRAVD-------------NSLIAAAGSLLAHVPAAVSFLEDWLKADYPFKRCTQVFVEGLPDVFAPFGSLCLLKAELLCTEDD-------RIPDGDLPGDARLSAVEVLL 315
V +EL P +G+++ + G +A H TTY+H +D+DGPRCWFPCVD + +++++ + S + + F+T+T T AR VGLAVG F W P +PR+ G L GG LA + + V+F ++WL DYPF+ T VFV GL APFG L LL+ ELLC D R+PD + GD + E LL
Sbjct: 156 VSYELYEPAAGLIWCHGGNQSGPAARRLPAHCRTTYAHGAVDVDGPRCWFPCVDAPAQSCVFELVLDLPSGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLXXPLPRARRLHFATDTCTTARGVGLAVGPFQHWVDPLAPRLHGYYL--VPDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDRAEQVARTLAALRSVVTFAQEWLNVDYPFQTATHVFVGGLEGRHAPFGGLVLLRDELLCPIDPCAHAPPPRLPDDNAHGDTHAAVAEGLL 446
BLAST of mRNA_Ecto-sp13_S_contig1616.4489.1 vs. uniprot
Match: D2V9A2_NAEGR (Transcription initiation factor TFIID subunit 2 n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V9A2_NAEGR) HSP 1 Score: 65.1 bits (157), Expect = 2.000e-7 Identity = 78/351 (22.22%), Postives = 143/351 (40.74%), Query Frame = 0
Query: 84 HMYTTYSHAPMDMDGPRCWFPCVDHASILISYDVMVRVASPKITAAFNGRLLESITLDVDDDDDGDAGVNGGTDGMAVGKGTSYSTCYRFSTETLTAARAVGLAVGRFAAWDVPQSPRVKGLVLRAASAGGGGRTGTMKSERRRAVDNSLIAAAGSLLAHVPAAVSFLEDWLKADYP----FKRCTQVFVEGLPDVFAPFGSLCLLKAELLCTEDDRIPDGDLPGDARLSAVEVLLYGWVSTALRLEGGKHRWLVHGIAGHLLTKFAAELRGEEEKQHRLWCAVQKAVALDCDLGCPSISPPTADLYIPDAIDPATAY--YARLKAVLILHMAEVKVQPADMQDALGSVMR 428
HMYT M G RCWFPCVD S S++ + + + +G L++ + + + TSY F T+++ + +V +AVG F + L+L A + S ++ ++L V A+ FLED+L+ Y VF+E + F +CLL + + E + I D D R+S V ++ + + + WL+ GIAG+L ++ G+ K+ ++ A ++ + SI T LYI + P+ Y K+ L+++M + ++ ++M++ L ++
Sbjct: 291 HMYTQ-----SQMQGARCWFPCVDLLSSFHSFEFEI-TSHAEAMIICSGDLIKQV------------------ENYSGTLKTSY-----FKTKSIISPSSVCIAVGPFNISYSSLTLNSYDLILNAFY---------LPSYSLESIRHTL--------GFVKRALIFLEDYLEFKYKDLFNLNTLNIVFIENGYTKQSTFSGICLLDSNQMILEPNII---DTVQDNRMSLVRLITEQFFGNFIHSKTWSDYWLIEGIAGYLAYQYYESEFGQNAKRFKIMKAGKELL---------SIENHTQSLYIENYCHPSELLTEYLLKKSPLVIYMIDRQISTSNMRNLLNKFLK 583 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1616.4489.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig1616.4489.1 ID=prot_Ecto-sp13_S_contig1616.4489.1|Name=mRNA_Ecto-sp13_S_contig1616.4489.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=445bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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