prot_Ecto-sp13_S_contig10025.44.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10025.44.1
Unique Nameprot_Ecto-sp13_S_contig10025.44.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length72
Homology
BLAST of mRNA_Ecto-sp13_S_contig10025.44.1 vs. uniprot
Match: A0A6H5KYR4_9PHAE (V-type proton ATPase subunit a n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYR4_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 2.810e-43
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
Query:    1 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEEV 72
            MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEEV
Sbjct:    1 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEEV 72          
BLAST of mRNA_Ecto-sp13_S_contig10025.44.1 vs. uniprot
Match: D7FPY6_ECTSI (V-type proton ATPase subunit a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY6_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 1.540e-39
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
Query:    1 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEEV 72
            MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEEV
Sbjct:   84 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEEV 155          
BLAST of mRNA_Ecto-sp13_S_contig10025.44.1 vs. uniprot
Match: A0A6U2Q738_9STRA (V-type proton ATPase subunit a (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2Q738_9STRA)

HSP 1 Score: 123 bits (309), Expect = 4.420e-34
Identity = 55/71 (77.46%), Postives = 65/71 (91.55%), Query Frame = 0
Query:    1 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEE 71
            MA+WFRSE+M YVS+IVNEDAAH C+SDLGKLG++QFTDLNP+LT FQRRYV+Y+KR DELERKL +FG E
Sbjct:    1 MAKWFRSEEMEYVSLIVNEDAAHQCLSDLGKLGVLQFTDLNPDLTPFQRRYVSYVKRCDELERKLRYFGNE 71          
BLAST of mRNA_Ecto-sp13_S_contig10025.44.1 vs. uniprot
Match: A0A7S4JK70_9STRA (V-type proton ATPase subunit a (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JK70_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.220e-33
Identity = 53/69 (76.81%), Postives = 63/69 (91.30%), Query Frame = 0
Query:    1 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFG 69
            MARWFRSE+M Y+S+IVNEDAAH C++DLG+LG+IQFTDLNP+LT FQRRYV+Y+KR DELERKL FF 
Sbjct:    1 MARWFRSEEMEYISLIVNEDAAHDCLADLGRLGVIQFTDLNPDLTPFQRRYVSYVKRCDELERKLRFFA 69          
BLAST of mRNA_Ecto-sp13_S_contig10025.44.1 vs. uniprot
Match: A0A835ZAQ4_9STRA (V-type proton ATPase subunit a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ4_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.400e-33
Identity = 59/72 (81.94%), Postives = 67/72 (93.06%), Query Frame = 0
Query:    1 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEEV 72
            MA WFRSEDM YVS+I+NEDAAH+CISDLGKLG++QFTDLNPELT FQRRYV +IKRIDELERK+ FFGEE+
Sbjct:    1 MASWFRSEDMTYVSLIMNEDAAHSCISDLGKLGVVQFTDLNPELTPFQRRYVNFIKRIDELERKIKFFGEEI 72          
BLAST of mRNA_Ecto-sp13_S_contig10025.44.1 vs. uniprot
Match: K0RXJ3_THAOC (V-type proton ATPase subunit a n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXJ3_THAOC)

HSP 1 Score: 119 bits (299), Expect = 1.440e-32
Identity = 54/71 (76.06%), Postives = 62/71 (87.32%), Query Frame = 0
Query:    1 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEE 71
            MARWFRSE M Y+S+IVNEDAAH C++DLGKL  IQFTDLNP+LT FQRRYV+Y++R DELERKL FFG E
Sbjct:    1 MARWFRSEHMEYISLIVNEDAAHDCLADLGKLSAIQFTDLNPDLTPFQRRYVSYVRRCDELERKLRFFGSE 71          
BLAST of mRNA_Ecto-sp13_S_contig10025.44.1 vs. uniprot
Match: A0A7S1BU79_9STRA (V-type proton ATPase subunit a (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BU79_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.030e-31
Identity = 57/71 (80.28%), Postives = 64/71 (90.14%), Query Frame = 0
Query:    1 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEE 71
            MARWFRSE M Y+S+IVNEDAAH C+SDLG+LGMIQFTDLNP+LT FQRRYV+Y+KR DELERKL FFG E
Sbjct:    1 MARWFRSEPMEYISLIVNEDAAHDCLSDLGQLGMIQFTDLNPDLTPFQRRYVSYVKRCDELERKLRFFGSE 71          
BLAST of mRNA_Ecto-sp13_S_contig10025.44.1 vs. uniprot
Match: A0A7S2IB47_9STRA (V-type proton ATPase subunit a (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IB47_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.510e-31
Identity = 54/71 (76.06%), Postives = 62/71 (87.32%), Query Frame = 0
Query:    1 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEE 71
            M+RWFRSE M Y+S+IVN DAAH C+SDLGKLG+IQFTDLNPELT FQRRYV+Y+KR DELERKL +F  E
Sbjct:   28 MSRWFRSEPMEYISLIVNGDAAHDCLSDLGKLGVIQFTDLNPELTPFQRRYVSYVKRCDELERKLRYFSTE 98          
BLAST of mRNA_Ecto-sp13_S_contig10025.44.1 vs. uniprot
Match: B7G3I2_PHATC (V-type proton ATPase subunit a n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3I2_PHATC)

HSP 1 Score: 121 bits (304), Expect = 1.700e-30
Identity = 54/72 (75.00%), Postives = 64/72 (88.89%), Query Frame = 0
Query:    1 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEEV 72
            MARWFRSE M Y+S+IVNEDAAH C++DLGKLG+IQFTDLNP+LT FQRRYV+Y+KR DELERKL +F  E+
Sbjct:    1 MARWFRSEPMEYISLIVNEDAAHDCLADLGKLGVIQFTDLNPDLTPFQRRYVSYVKRCDELERKLRYFSNEI 72          
BLAST of mRNA_Ecto-sp13_S_contig10025.44.1 vs. uniprot
Match: A0A7S3Q253_9STRA (V-type proton ATPase subunit a n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q253_9STRA)

HSP 1 Score: 119 bits (299), Expect = 8.070e-30
Identity = 54/71 (76.06%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEE 71
            M+RWFRSE M Y+S+IVNEDAAH C++DLGKLG+IQFTDLNP+LT FQRRYV+Y+KR DELERKL FF  E
Sbjct:    1 MSRWFRSEPMEYISLIVNEDAAHDCLADLGKLGVIQFTDLNPDLTPFQRRYVSYVKRCDELERKLRFFAGE 71          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10025.44.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYR4_9PHAE2.810e-43100.00V-type proton ATPase subunit a n=1 Tax=Ectocarpus ... [more]
D7FPY6_ECTSI1.540e-39100.00V-type proton ATPase subunit a n=1 Tax=Ectocarpus ... [more]
A0A6U2Q738_9STRA4.420e-3477.46V-type proton ATPase subunit a (Fragment) n=1 Tax=... [more]
A0A7S4JK70_9STRA1.220e-3376.81V-type proton ATPase subunit a (Fragment) n=1 Tax=... [more]
A0A835ZAQ4_9STRA3.400e-3381.94V-type proton ATPase subunit a n=1 Tax=Tribonema m... [more]
K0RXJ3_THAOC1.440e-3276.06V-type proton ATPase subunit a n=1 Tax=Thalassiosi... [more]
A0A7S1BU79_9STRA1.030e-3180.28V-type proton ATPase subunit a (Fragment) n=1 Tax=... [more]
A0A7S2IB47_9STRA1.510e-3176.06V-type proton ATPase subunit a (Fragment) n=1 Tax=... [more]
B7G3I2_PHATC1.700e-3075.00V-type proton ATPase subunit a n=3 Tax=Phaeodactyl... [more]
A0A7S3Q253_9STRA8.070e-3076.06V-type proton ATPase subunit a n=1 Tax=Chaetoceros... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
IPR002490V-type ATPase, V0 complex, 116kDa subunit familyPFAMPF01496V_ATPase_Icoord: 28..72
e-value: 1.5E-13
score: 49.6
IPR002490V-type ATPase, V0 complex, 116kDa subunit familyPANTHERPTHR11629VACUOLAR PROTON ATPASEScoord: 5..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10025contigEcto-sp13_S_contig10025:1626..1841 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10025.44.1mRNA_Ecto-sp13_S_contig10025.44.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10025 1626..1841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10025.44.1 ID=prot_Ecto-sp13_S_contig10025.44.1|Name=mRNA_Ecto-sp13_S_contig10025.44.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=72bp
MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRR
YVAYIKRIDELERKLAFFGEEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002490V-ATPase_116kDa_su