mRNA_Ecto-sp13_S_contig16060.4432.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16060.4432.1 vs. uniprot
Match: D8LS13_ECTSI (Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS13_ECTSI) HSP 1 Score: 143 bits (361), Expect = 4.140e-42 Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 1
Query: 1 QAVLIVNVASQCSTAERNYLELQALREAYDEEELAIVAFPCNQFGGLEPGSWQEISSSAERRFGVTFPIMGK 216
+AVLIVNVASQCSTAERNYLELQALREAYDEEELAIVAFPCNQFGG EPGSWQEISSSAERRFGVTFPIMGK
Sbjct: 30 RAVLIVNVASQCSTAERNYLELQALREAYDEEELAIVAFPCNQFGGQEPGSWQEISSSAERRFGVTFPIMGK 101
BLAST of mRNA_Ecto-sp13_S_contig16060.4432.1 vs. uniprot
Match: A0A6H5KPS4_9PHAE (Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPS4_9PHAE) HSP 1 Score: 106 bits (264), Expect = 3.960e-27 Identity = 49/71 (69.01%), Postives = 59/71 (83.10%), Query Frame = 1
Query: 4 AVLIVNVASQCSTAERNYLELQALREAYDEEELAIVAFPCNQFGGLEPGSWQEISSSAERRFGVTFPIMGK 216
AVLIVNVAS C +R+Y ELQALR +DE++LAIVAFPCNQFG EPG+W+EI+S A+ +FGVTFPIM K
Sbjct: 46 AVLIVNVASHCGYTDRDYRELQALRAKHDEDQLAIVAFPCNQFGAQEPGTWEEIASLADGKFGVTFPIMSK 116
BLAST of mRNA_Ecto-sp13_S_contig16060.4432.1 vs. uniprot
Match: UPI0016755F74 (glutathione peroxidase n=1 Tax=Alishewanella tabrizica TaxID=671278 RepID=UPI0016755F74) HSP 1 Score: 82.4 bits (202), Expect = 3.770e-18 Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 1 QAVLIVNVASQCSTAERNYLELQALREAYDEEELAIVAFPCNQFGGLEPGSWQEISSSAERRFGVTFPIMGK 216
+ VLIVN AS+C + Y EL+AL + Y ++ L I+AFPCNQFGG EPGS EIS E +GVTFP+MGK
Sbjct: 25 KVVLIVNTASKCGFTPQ-YKELEALHKQYHDKGLVILAFPCNQFGGQEPGSNAEISQFCEINYGVTFPLMGK 95
BLAST of mRNA_Ecto-sp13_S_contig16060.4432.1 vs. uniprot
Match: A0A7W7CFH4_9PSEU (Glutathione peroxidase n=3 Tax=Crossiella TaxID=130795 RepID=A0A7W7CFH4_9PSEU) HSP 1 Score: 82.4 bits (202), Expect = 4.050e-18 Identity = 40/72 (55.56%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 1 QAVLIVNVASQCSTAERNYLELQALREAYDEEELAIVAFPCNQFGGLEPGSWQEISSSAERRFGVTFPIMGK 216
+AVLIVNVAS+C + YL L+A+ E Y E A+V FPCNQFGG EPGS +EI + +GVTFP+M K
Sbjct: 24 KAVLIVNVASKCGLTNQ-YLGLEAIHERYAERGFAVVGFPCNQFGGQEPGSAEEIQTFCSTSYGVTFPMMAK 94
BLAST of mRNA_Ecto-sp13_S_contig16060.4432.1 vs. uniprot
Match: A0A067NBV4_PLEOS (Glutathione peroxidase n=3 Tax=Pleurotus ostreatus TaxID=5322 RepID=A0A067NBV4_PLEOS) HSP 1 Score: 82.0 bits (201), Expect = 5.460e-18 Identity = 42/73 (57.53%), Postives = 51/73 (69.86%), Query Frame = 1
Query: 1 QAVLIVNVASQCSTAERNYLELQALREAYDEEELAIVAFPCNQFGGLEPGSWQEISSSAERRFGVTFPIMGKA 219
+ VLIVNVASQC + Y LQAL E Y E+ L I+ FPCNQFGG EPG+ EI++ ER GVTFP+M K+
Sbjct: 25 KVVLIVNVASQCGFTPQ-YKGLQALYEKYHEKGLEILGFPCNQFGGQEPGTDDEIATFCERNHGVTFPLMAKS 96
BLAST of mRNA_Ecto-sp13_S_contig16060.4432.1 vs. uniprot
Match: A0A3R7S1X8_9BACT (Glutathione peroxidase n=1 Tax=Phycisphaera sp. TMED9 TaxID=1986611 RepID=A0A3R7S1X8_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 7.040e-18 Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 1
Query: 1 QAVLIVNVASQCSTAERNYLELQALREAYDEEELAIVAFPCNQFGGLEPGSWQEISSSAERRFGVTFPIMGKAS 222
+AVL+VNVAS+C R Y LQAL+EA+ ++ L +V FPCN FGG EPG+ EI + ++GVTFP+M K S
Sbjct: 22 KAVLVVNVASRCGFT-RQYAGLQALQEAFKDQGLVVVGFPCNDFGGQEPGTAGEIKTFCSSKYGVTFPMMSKIS 94
BLAST of mRNA_Ecto-sp13_S_contig16060.4432.1 vs. uniprot
Match: UPI001FE7BB34 (glutathione peroxidase n=1 Tax=Alienimonas chondri TaxID=2681879 RepID=UPI001FE7BB34) HSP 1 Score: 82.0 bits (201), Expect = 7.360e-18 Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 1 QAVLIVNVASQCSTAERNYLELQALREAYDEEELAIVAFPCNQFGGLEPGSWQEISSSAERRFGVTFPIMGK 216
+ VLIVNVASQC + Y LQ + E Y +E L I+ FPCNQFGG EPG+ EI++ E+ +GV FP+MGK
Sbjct: 21 KVVLIVNVASQCGFT-KQYKPLQKVHERYSDEGLVILGFPCNQFGGQEPGAPAEIAAFCEKNYGVEFPLMGK 91
BLAST of mRNA_Ecto-sp13_S_contig16060.4432.1 vs. uniprot
Match: A0A3M6VL97_9STRA (Glutathione peroxidase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL97_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.130e-17 Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 1 QAVLIVNVASQCSTAERNYLELQALREAYDEEELAIVAFPCNQFGGLEPGSWQEISSSAERRFGVTFPIMGK 216
+ +L+VNVAS+C ++NY ELQ L+E Y +E ++ FPCNQFGG EPG+ EI + ++ VTFPI K
Sbjct: 52 RVILVVNVASECGYTDKNYRELQELQEKYYDEGFTVLGFPCNQFGGQEPGTADEIMKFTQEKYHVTFPIFSK 123
BLAST of mRNA_Ecto-sp13_S_contig16060.4432.1 vs. uniprot
Match: UPI0015FC3F67 (glutathione peroxidase n=1 Tax=Nocardioides dongkuii TaxID=2760089 RepID=UPI0015FC3F67) HSP 1 Score: 80.9 bits (198), Expect = 1.650e-17 Identity = 39/72 (54.17%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 1 QAVLIVNVASQCSTAERNYLELQALREAYDEEELAIVAFPCNQFGGLEPGSWQEISSSAERRFGVTFPIMGK 216
Q VL+VN ASQC + Y LQ L++ + E A++ FPC+QFGG EPGS +EIS ERRFGVTFP+ K
Sbjct: 29 QVVLVVNTASQCGFTPQ-YQGLQELQDRFGESGFAVLGFPCDQFGGQEPGSDEEISGFCERRFGVTFPLFSK 99
BLAST of mRNA_Ecto-sp13_S_contig16060.4432.1 vs. uniprot
Match: UPI0019F07793 (Uncharacterized protein n=1 Tax=Alienimonas chondri TaxID=2681879 RepID=UPI0019F07793) HSP 1 Score: 82.0 bits (201), Expect = 1.930e-17 Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 1 QAVLIVNVASQCSTAERNYLELQALREAYDEEELAIVAFPCNQFGGLEPGSWQEISSSAERRFGVTFPIMGK 216
+ VLIVNVASQC + Y LQ + E Y +E L I+ FPCNQFGG EPG+ EI++ E+ +GV FP+MGK
Sbjct: 68 KVVLIVNVASQCGFT-KQYKPLQKVHERYSDEGLVILGFPCNQFGGQEPGAPAEIAAFCEKNYGVEFPLMGK 138 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16060.4432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16060.4432.1 >prot_Ecto-sp13_S_contig16060.4432.1 ID=prot_Ecto-sp13_S_contig16060.4432.1|Name=mRNA_Ecto-sp13_S_contig16060.4432.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=78bp QAVLIVNVASQCSTAERNYLELQALREAYDEEELAIVAFPCNQFGGLEPGback to top mRNA from alignment at Ecto-sp13_S_contig16060:3121..3923+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16060.4432.1 ID=mRNA_Ecto-sp13_S_contig16060.4432.1|Name=mRNA_Ecto-sp13_S_contig16060.4432.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=803bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16060:3121..3923+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16060:3121..3923+ >mRNA_Ecto-sp13_S_contig16060.4432.1 ID=mRNA_Ecto-sp13_S_contig16060.4432.1|Name=mRNA_Ecto-sp13_S_contig16060.4432.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=234bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16060:3121..3923+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |