prot_Ecto-sp13_S_contig16048.4424.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16048.4424.1
Unique Nameprot_Ecto-sp13_S_contig16048.4424.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length548
Homology
BLAST of mRNA_Ecto-sp13_S_contig16048.4424.1 vs. uniprot
Match: D8LJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU4_ECTSI)

HSP 1 Score: 396 bits (1017), Expect = 9.580e-124
Identity = 356/489 (72.80%), Postives = 371/489 (75.87%), Query Frame = 0
Query:   60 QEWLKAAQEEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDPADGSKAPGDSSAVVATGAVAGXXXXXXXXGAVEAPGAGPEASGDAGKSGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDAVTVDGKAEERGGEATPATSTPPVEAAAKEGEGAAALGETDKEKGXXXXXXXXX-EEGPSYGEVMEWDAQRDALELKEIMIAERTKERRRGLMREQAKGQAVVQYLTKLEREKRGRSNLLRAKGLMLADVARMLPERVKEVIELRNKIDNISQGLGGSGTNDNSGDGDGTRKAGTAESSVEGTAADTGSLAGEAKSKTKASPASEGSTNADSDTNTSPQRTSPSACSGSDMASAGAATPGSSACPDGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPFAATPSCGDDAGGEGLLLGSNPDVHALTAQSMLR 547
            +EWL+AAQEEEK  XXXXXXXXXXXXXXXXX                  V PA GSKA GDS+AVVATGAVAG        GAVEAPG  P ASGDAGKSG AA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             AV VDGKAEE GGEA PAT T PVEAA KEGEGAAA+GETDKE+GXXXXXXXXX E GPSYGEVMEWDA+RDALELKEIMIAERT+ERRRGLMREQAKGQAVVQYLTKLERE+RGRSNLLRAKGLMLADVARMLPERVKE+IELRNKID ISQGLGGSGTNDN+G      KAGTAESSVEGTAA TGSLAGEAK+K+KAS ASEGSTNA ++T    QRTSPS+ SG DMASAGA TPGSSAC DGK                                       XXXXXXXXXXXXXX  FAATPSCGDDA GEGLLLGSNPDVHALTAQSMLR
Sbjct:   83 REWLQAAQEEEKQDXXXXXXXXXXXXXXXXXGDRAAESSVASTAVA---VHPAGGSKASGDSAAVVATGAVAGVGDGKGKEGAVEAPGGSPAASGDAGKSGDAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENAV---------AVAVDGKAEEGGGEAKPATGTQPVEAAVKEGEGAAAVGETDKEEGXXXXXXXXXXESGPSYGEVMEWDARRDALELKEIMIAERTRERRRGLMREQAKGQAVVQYLTKLEREERGRSNLLRAKGLMLADVARMLPERVKEMIELRNKIDKISQGLGGSGTNDNNGXXXXXXKAGTAESSVEGTAAGTGSLAGEAKNKSKASRASEGSTNATANT----QRTSPSS-SGFDMASAGATTPGSSACSDGKDKGKGKARRRNDDNGKGGESAKSGVVDSMAEDEGEQEASXXXXXXXXXXXXXX--FAATPSCGDDASGEGLLLGSNPDVHALTAQSMLR 552          
BLAST of mRNA_Ecto-sp13_S_contig16048.4424.1 vs. uniprot
Match: A0A6H5KRP0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRP0_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 8.180e-67
Identity = 363/549 (66.12%), Postives = 371/549 (67.58%), Query Frame = 0
Query:    1 LQAGLPEGVIVKTTKEKREEAXXXXXXXXXXXXXXXXXXXXXXTAAADAKVDPRLTPKEQEWLKAAQEEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDPADGSKAPGDSSAVVATGAVAGXXXXXXXXGAVEAPGAGPEASGDAGKSGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDAVTVDGKAEERGGEATPATSTPPVEAAAKEGEGAAALGETDKEKGXXXXXXXXXEEGPSYGEVMEWDAQRDALELKEIMIAERTKERRRGLMREQAKGQAVVQYLTKLEREKRGRSNLLRAKGLMLADVARMLPERVKEVIELRNKIDNISQGLGGSGTNDNSGDGDGTRKAGTA--ESSVEGTAADTGSLAGEAKSKTKASPASEGSTNADSDTNTSPQRTSPSACSGSDMASAGAATPGSSACPDGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPFAATPSCGDDAGGEGLLLGSNPDVHALTAQSMLR 547
            +QAGLPE VIVKTTKEKREEA      XXXXXXXXXXXXXXXXTAAADAKVDPRLTPK+QEWLKAAQEEEK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   VDPA          AVVATGAVAG        GAVEAPGAGPEASGDA KSGA A                     XXXXXXXXXXXXXXXXXXXXXXXXX                                               XXXXXXXXXE GPSYGE+MEWDAQRDALELKEIMIAERT+ERRRGLMREQAKGQAVVQYL KLERE+RGRSNLLRAKGLMLAD+ARMLPERVKEVIELRNKID ISQGLGGS                    E SV+G AA  G                                            SAGA+TPGSSAC DG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   FAATPSCGDD  GEGLLL SNPDVHALTAQSMLR
Sbjct:  325 VQAGLPEDVIVKTTKEKREEAEAAVKAXXXXXXXXXXXXXXXXTAAADAKVDPRLTPKQQEWLKAAQEEEKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---VDPAXXXXXXXXXXAVVATGAVAGGGDGKGKEGAVEAPGAGPEASGDAEKSGAVAAGASATAMHVDSDDGGTEGKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------XXXXXXXXXXXXXXXESGPSYGELMEWDAQRDALELKEIMIAERTRERRRGLMREQAKGQAVVQYLAKLEREERGRSNLLRAKGLMLADLARMLPERVKEVIELRNKIDKISQGLGGSXXXXXXXXXXXXXXXXXXXXECSVKGIAA--GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAGASTPGSSACLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--FAATPSCGDDTSGEGLLLCSNPDVHALTAQSMLR 852          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16048.4424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJU4_ECTSI9.580e-12472.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRP0_9PHAE8.180e-6766.12Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 11..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16048contigEcto-sp13_S_contig16048:345..3967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16048.4424.1mRNA_Ecto-sp13_S_contig16048.4424.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16048 345..3967 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16048.4424.1 ID=prot_Ecto-sp13_S_contig16048.4424.1|Name=mRNA_Ecto-sp13_S_contig16048.4424.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=548bp
LQAGLPEGVIVKTTKEKREEAEAAVKAAAEATATAEAEAAKAETAAADAK
VDPRLTPKEQEWLKAAQEEEKQEEKQDAEKEPDGQQADGTREGGDRAAES
SVASTAVAVDPADGSKAPGDSSAVVATGAVAGGSDGKGKEGAVEAPGAGP
EASGDAGKSGAAAAAAAAAAASGASATAMDVENDDDRTEDKDKDKDKDKD
KDETEGKGKEDAVTVDGKAEERGGEATPATSTPPVEAAAKEGEGAAALGE
TDKEKGKGEEEGEGEEEGPSYGEVMEWDAQRDALELKEIMIAERTKERRR
GLMREQAKGQAVVQYLTKLEREKRGRSNLLRAKGLMLADVARMLPERVKE
VIELRNKIDNISQGLGGSGTNDNSGDGDGTRKAGTAESSVEGTAADTGSL
AGEAKSKTKASPASEGSTNADSDTNTSPQRTSPSACSGSDMASAGAATPG
SSACPDGKGKGKGKGKARLTDGENGKGGASAKAGEADSMAEGEGEQEASP
SSATAAASSSSSPFAATPSCGDDAGGEGLLLGSNPDVHALTAQSMLR*
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