mRNA_Ecto-sp13_S_contig16029.4413.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16029.4413.1 vs. uniprot
Match: A0A6H5KPY4_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY4_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 3.280e-22 Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 1
Query: 19 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXAVCAPVR 222
LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXX VCAPVR
Sbjct: 900 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVR 967
BLAST of mRNA_Ecto-sp13_S_contig16029.4413.1 vs. uniprot
Match: D8LPT9_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT9_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 2.550e-20 Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 1
Query: 19 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCP 135
LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCP
Sbjct: 107 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCP 145
BLAST of mRNA_Ecto-sp13_S_contig16029.4413.1 vs. uniprot
Match: B8LBX0_THAPS (Histone acetyltransferase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBX0_THAPS) HSP 1 Score: 82.0 bits (201), Expect = 5.040e-19 Identity = 60/74 (81.08%), Postives = 64/74 (86.49%), Query Frame = 1
Query: 1 QQRLLLLRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXAVCAPVR 222
QQRLLLLRHA+KCP + QC VTPHC MKRLWKHIAECK+Q+C XXXXXXXXXXXXXXXXXXXXX VC PVR
Sbjct: 1 QQRLLLLRHAAKCPHQDNQCPVTPHCAGMKRLWKHIAECKDQKCVXXXXXXXXXXXXXXXXXXXXXXPVCGPVR 74
BLAST of mRNA_Ecto-sp13_S_contig16029.4413.1 vs. uniprot
Match: A0A835Z3F1_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3F1_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 7.150e-19 Identity = 57/74 (77.03%), Postives = 61/74 (82.43%), Query Frame = 1
Query: 1 QQRLLLLRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXAVCAPVR 222
QQRLLLLRHASKCPAE +C VTPHC MK+LW+HIA CK Q C +XXXXXXXXXXXXXXXXX AVCAPVR
Sbjct: 1 QQRLLLLRHASKCPAEANKCPVTPHCANMKKLWQHIALCKVQTCNVXXXXXXXXXXXXXXXXXDHKCAVCAPVR 74
BLAST of mRNA_Ecto-sp13_S_contig16029.4413.1 vs. uniprot
Match: A0A7S1UG10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UG10_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.660e-17 Identity = 62/77 (80.52%), Postives = 70/77 (90.91%), Query Frame = 1
Query: 1 QQRLLLLRHASKCPAE---GEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXAVCAPVR 222
QQRLLLLRHASKCP + G+QC VTPHC +MK+LWKHIAECK+Q+C +XXXXXXXXXXXXXXXXXXXXX+VCAPVR
Sbjct: 398 QQRLLLLRHASKCPFDSESGQQCTVTPHCASMKKLWKHIAECKDQRCQVXXXXXXXXXXXXXXXXXXXXXSVCAPVR 474
BLAST of mRNA_Ecto-sp13_S_contig16029.4413.1 vs. uniprot
Match: A0A7S4ILK3_9STRA (Histone acetyltransferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ILK3_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 2.390e-17 Identity = 57/74 (77.03%), Postives = 66/74 (89.19%), Query Frame = 1
Query: 1 QQRLLLLRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXAVCAPVR 222
QQRLLLLRHASKCP E +CKVTP+C +MKRLW+HI++C++QQCP+ XXXXXXXXXXXXXXXXXXX CAPVR
Sbjct: 164 QQRLLLLRHASKCPYEDGKCKVTPYCASMKRLWRHISDCRDQQCPVQHXXXXXXXXXXXXXXXXXXXXACAPVR 237
BLAST of mRNA_Ecto-sp13_S_contig16029.4413.1 vs. uniprot
Match: A0A7S4MNF2_9STRA (Histone acetyltransferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MNF2_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 2.420e-17 Identity = 57/74 (77.03%), Postives = 66/74 (89.19%), Query Frame = 1
Query: 1 QQRLLLLRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXAVCAPVR 222
QQRLLLLRHASKCP E +CKVTP+C +MKRLW+HI++C++QQCP+ XXXXXXXXXXXXXXXXXXX CAPVR
Sbjct: 164 QQRLLLLRHASKCPYEDGKCKVTPYCASMKRLWRHISDCRDQQCPVQHXXXXXXXXXXXXXXXXXXXXACAPVR 237
BLAST of mRNA_Ecto-sp13_S_contig16029.4413.1 vs. uniprot
Match: A0A8J2ST16_9STRA (Histone acetyltransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2ST16_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 3.300e-17 Identity = 60/72 (83.33%), Postives = 63/72 (87.50%), Query Frame = 1
Query: 7 RLLLLRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXAVCAPVR 222
RLLLLRHASKCP E +C VTPHC MKRLWKHIAECK+QQC + XXXXXXXXXXXXXXXXXXXXAVC PVR
Sbjct: 230 RLLLLRHASKCPHENGKCPVTPHCAGMKRLWKHIAECKDQQCQMAXXXXXXXXXXXXXXXXXXXXAVCGPVR 301
BLAST of mRNA_Ecto-sp13_S_contig16029.4413.1 vs. uniprot
Match: A0A6U3SN67_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3SN67_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 4.500e-17 Identity = 60/74 (81.08%), Postives = 65/74 (87.84%), Query Frame = 1
Query: 1 QQRLLLLRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXAVCAPVR 222
QQRLLLLRHA+KCP + QC VTPHC MKRLWKHIAECK+Q+C +XXXXXXXXXXXXXXXXXXXXX VC PVR
Sbjct: 72 QQRLLLLRHAAKCPHQDNQCPVTPHCAGMKRLWKHIAECKDQKCMVXXXXXXXXXXXXXXXXXXXXXPVCGPVR 145
BLAST of mRNA_Ecto-sp13_S_contig16029.4413.1 vs. uniprot
Match: A0A7S2VVC1_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VVC1_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 8.380e-17 Identity = 60/74 (81.08%), Postives = 65/74 (87.84%), Query Frame = 1
Query: 1 QQRLLLLRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXAVCAPVR 222
QQRLLLLRHA+KCP E +C VTPHC MKRLWKHIAECK+Q+C +XXXXXXXXXXXXXXXXXXXXX VC PVR
Sbjct: 199 QQRLLLLRHAAKCPHENGKCPVTPHCAGMKRLWKHIAECKDQKCQVXXXXXXXXXXXXXXXXXXXXXPVCMPVR 272 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16029.4413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16029.4413.1 >prot_Ecto-sp13_S_contig16029.4413.1 ID=prot_Ecto-sp13_S_contig16029.4413.1|Name=mRNA_Ecto-sp13_S_contig16029.4413.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=38bp MQGYAALPGYEALVEAHRRVQEPAVPDSTLRVVSLRA*back to top mRNA from alignment at Ecto-sp13_S_contig16029:829..1253- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16029.4413.1 ID=mRNA_Ecto-sp13_S_contig16029.4413.1|Name=mRNA_Ecto-sp13_S_contig16029.4413.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=425bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16029:829..1253- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16029:829..1253- >mRNA_Ecto-sp13_S_contig16029.4413.1 ID=mRNA_Ecto-sp13_S_contig16029.4413.1|Name=mRNA_Ecto-sp13_S_contig16029.4413.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=114bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16029:829..1253- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |