mRNA_Ecto-sp13_S_contig15998.4394.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15998.4394.1 vs. uniprot
Match: A0A6H5KL56_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL56_9PHAE) HSP 1 Score: 398 bits (1022), Expect = 7.600e-136 Identity = 196/258 (75.97%), Postives = 200/258 (77.52%), Query Frame = 1
Query: 1 VVDWMDKHPGGSEVVHLMAGRDATDAFASYHPFTDKPQKMLPKFEIGTLVSREFTPYKRDESGFYREMCKRVGQ--------------------------------------------------------ALPLLHVMHDSSHTAFGRTQNWHSFGGRLFMDFYAGANLTSWHYQHVVGHHIYTNVFGADPDLPETAEGDPRRLVHRQKNASMYKYQHLYLPPLYGILGLKFRIQDLTGTFFGKTNGPVRVNPISLYR 606
+ +WMDKHPGGSEVVHLMAGRDATDAFASYHPFT+KPQKMLPKFEIGTLVSREFTPYKRDESGFYREMC RVGQ ALPLLHVMHDSSHTAFGRTQNWHSFGGRLFMDF+AGANLTSWHYQHVVGHHIYTNVFGADPDLPETAEGDPRRLVHRQKNASMYKYQHLYLPPLYGILGLKFRIQDLTGTFFGKTNGPVRVNPISLYR
Sbjct: 63 ITNWMDKHPGGSEVVHLMAGRDATDAFASYHPFTNKPQKMLPKFEIGTLVSREFTPYKRDESGFYREMCTRVGQYFEDNKLNPKGVWPGVWRMTLVFACAIAAFLATNGFWPSVPLSVRFLTAALFGVLQALPLLHVMHDSSHTAFGRTQNWHSFGGRLFMDFFAGANLTSWHYQHVVGHHIYTNVFGADPDLPETAEGDPRRLVHRQKNASMYKYQHLYLPPLYGILGLKFRIQDLTGTFFGKTNGPVRVNPISLYR 320
BLAST of mRNA_Ecto-sp13_S_contig15998.4394.1 vs. uniprot
Match: A0A835Z094_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z094_9STRA) HSP 1 Score: 292 bits (748), Expect = 1.710e-94 Identity = 150/259 (57.92%), Postives = 167/259 (64.48%), Query Frame = 1
Query: 1 VVDWMDKHPGGSEVVHLMAGRDATDAFASYHPFTDKPQKMLPKFEIGTLVSREFTPYKRDESGFYREMCKRVG---------------------------------------------------------QALPLLHVMHDSSHTAFGRTQNWHSFGGRLFMDFYAGANLTSWHYQHVVGHHIYTNVFGADPDLPETAEGDPRRLVHRQKNASMYKYQHLYLPPLYGILGLKFRIQDLTGTFFGKTNGPVRVNPISLYR 606
+ W+D HPGG EV+ LMAGRDAT AF SYHPFTDKP+K+L KFE+G + + EF Y+ D SGFY M KR+ QA+PLLHVMHDSSHTAFG +Q W S+GGRLFMDFYAGAN+TSWHYQHVVGHHIYTNV+ ADPDLP EGDPRRLV RQ +Y+YQHLYLPPLYGILGLKFRIQDLT TFFG NGPVRVNPIS YR
Sbjct: 59 LTSWVDNHPGGREVLLLMAGRDATAAFESYHPFTDKPRKILGKFEVGAVSNHEFPQYRPD-SGFYSTMNKRLAAYFKENKLNPKSPWPGVWRMILVSACAVACFLACNNFWAGALPPWARVLAAAAFGVLQAMPLLHVMHDSSHTAFGNSQAWWSYGGRLFMDFYAGANMTSWHYQHVVGHHIYTNVYQADPDLPVADEGDPRRLVDRQTWKPLYQYQHLYLPPLYGILGLKFRIQDLTDTFFGGKNGPVRVNPISTYR 316
BLAST of mRNA_Ecto-sp13_S_contig15998.4394.1 vs. uniprot
Match: A0A3L6VXG3_9STRA (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VXG3_9STRA) HSP 1 Score: 247 bits (631), Expect = 3.050e-78 Identity = 134/254 (52.76%), Postives = 155/254 (61.02%), Query Frame = 1
Query: 1 VVDWMDKHPGGSEVVHLMAGRDATDAFASYHPFTDKPQKMLPKFEIGTLVS-REFTPYKRDESGFYREMCKRVG-----------------------------------------------------QALPLLHVMHDSSHTAFGRTQNWHSFGGRLFMDFYAGANLTSWHYQHVVGHHIYTNVFGADPDLPETAEGDPRRLVHRQKNASMYKYQHLYLPPLYGILGLKFRIQDLTGTFFGKTNGPVRVNPISL 600
V W+DKHPGG+E+V L +GR+ATD F SYHPF+D+ +K+L K+EIGTL EF YK D +GFYRE KRVG QALPLLHVMHDSSH AF + F GRLFMD++AGA++ SW QHVVGHHIYTNV GADPDLP EGD RR+V RQ MY++QHLYLPPLYG+LGLKFRIQD T TF TNGP+RVNP SL
Sbjct: 51 VTSWVDKHPGGAEMVTLHSGREATDTFDSYHPFSDRAEKVLAKYEIGTLAGPAEFPVYKPD-TGFYRECRKRVGEYFDKNKINPQAGFAGFWRMIVVMAIAAATYYGMHFSTILAVQVAAAAIFGVCQALPLLHVMHDSSHAAFTKQPFIREFTGRLFMDWFAGASMVSWLNQHVVGHHIYTNVAGADPDLPVDFEGDVRRIVTRQVLKPMYRFQHLYLPPLYGLLGLKFRIQDFTDTFVSLTNGPIRVNPPSL 303
BLAST of mRNA_Ecto-sp13_S_contig15998.4394.1 vs. uniprot
Match: W4HC19_9STRA (Cytochrome b5 heme-binding domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HC19_9STRA) HSP 1 Score: 247 bits (631), Expect = 4.920e-77 Identity = 134/254 (52.76%), Postives = 155/254 (61.02%), Query Frame = 1
Query: 1 VVDWMDKHPGGSEVVHLMAGRDATDAFASYHPFTDKPQKMLPKFEIGTLVS-REFTPYKRDESGFYREMCKRVG-----------------------------------------------------QALPLLHVMHDSSHTAFGRTQNWHSFGGRLFMDFYAGANLTSWHYQHVVGHHIYTNVFGADPDLPETAEGDPRRLVHRQKNASMYKYQHLYLPPLYGILGLKFRIQDLTGTFFGKTNGPVRVNPISL 600
V W+DKHPGG+E+V L +GR+ATD F SYHPF+D+ +K+L K+EIGTL EF YK D +GFYRE KRVG QALPLLHVMHDSSH AF + F GRLFMD++AGA++ SW QHVVGHHIYTNV GADPDLP EGD RR+V RQ MY++QHLYLPPLYG+LGLKFRIQD T TF TNGP+RVNP SL
Sbjct: 51 VTSWVDKHPGGAEMVTLHSGREATDTFDSYHPFSDRAEKVLAKYEIGTLAGPAEFPVYKPD-TGFYRECRKRVGEYFDKNKINPQAGFAGFWRMIVVMAIAAATYYGMHFSTILAVQVAAAAIFGVCQALPLLHVMHDSSHAAFTKQPFIREFTGRLFMDWFAGASMVSWLNQHVVGHHIYTNVAGADPDLPVDFEGDVRRIVTRQVLKPMYRFQHLYLPPLYGLLGLKFRIQDFTDTFVSLTNGPIRVNPPSL 303
BLAST of mRNA_Ecto-sp13_S_contig15998.4394.1 vs. uniprot
Match: A0A024US17_9STRA (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024US17_9STRA) HSP 1 Score: 247 bits (631), Expect = 4.920e-77 Identity = 134/253 (52.96%), Postives = 155/253 (61.26%), Query Frame = 1
Query: 1 VVDWMDKHPGGSEVVHLMAGRDATDAFASYHPFTDKPQKMLPKFEIGTLVS-REFTPYKRDESGFYREMCKRVG-----------------------------------------------------QALPLLHVMHDSSHTAFGRTQNWHSFGGRLFMDFYAGANLTSWHYQHVVGHHIYTNVFGADPDLPETAEGDPRRLVHRQKNASMYKYQHLYLPPLYGILGLKFRIQDLTGTFFGKTNGPVRVNPIS 597
V W+DKHPGG+E+V L +GR+ATD F SYHPF+DK +K+L K+EIGTLV EF YK D SGFYRE KRVG QALPLLHVMHDSSH AF + F GRLFMD++AGA++ SW QHVVGHHIYTNV GADPDLP + D RR+V RQ S+Y++QHLYLPPLYG+LGLKFRIQD T TF TNGP+RVNP S
Sbjct: 51 VTSWVDKHPGGAEMVILHSGREATDTFDSYHPFSDKAEKVLAKYEIGTLVGPAEFPVYKPD-SGFYRECRKRVGEYFEKNNINPQAGFAGFWRMTVVMAVAAASYYGMHFSPVLAVRVVSAAIFGICQALPLLHVMHDSSHAAFTKQPFIREFAGRLFMDWFAGASMVSWLNQHVVGHHIYTNVAGADPDLPVNFDSDVRRIVSRQMMHSIYRFQHLYLPPLYGLLGLKFRIQDFTDTFGSLTNGPIRVNPPS 302
BLAST of mRNA_Ecto-sp13_S_contig15998.4394.1 vs. uniprot
Match: A0A6G0XP74_9STRA (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XP74_9STRA) HSP 1 Score: 243 bits (620), Expect = 2.190e-75 Identity = 129/252 (51.19%), Postives = 150/252 (59.52%), Query Frame = 1
Query: 1 VVDWMDKHPGGSEVVHLMAGRDATDAFASYHPFTDKPQKMLPKFEIGTLVSREFTPYKRDESGFYREMCKRVG-----------------------------------------------------QALPLLHVMHDSSHTAFGRTQNWHSFGGRLFMDFYAGANLTSWHYQHVVGHHIYTNVFGADPDLPETAEGDPRRLVHRQKNASMYKYQHLYLPPLYGILGLKFRIQDLTGTFFGKTNGPVRVNPIS 597
V W+DKHPGG E+V L AGR+ TD F SYHPF+DK +++L K+EIGTL P + +SGFY+E KRVG QALPLLHVMHDSSH AF + F GRLFMD++AGA++ SW QHVVGHHIYTNV GADPDLP EGD RRLV RQ MY++QH+YLPPLYG+LGLKFRIQD T TF TNGP+RVNP S
Sbjct: 51 VTAWVDKHPGGREMVLLHAGRECTDTFDSYHPFSDKAEQVLAKYEIGTLTGPSEFPVYKPDSGFYKECRKRVGEYFEKNKLNPQDGFAGFWRMIVVVSVAAVAYYGMHFSNIFTVQAIAAVVFGFCQALPLLHVMHDSSHAAFTKQPFIREFAGRLFMDWFAGASMVSWLNQHVVGHHIYTNVTGADPDLPVNLEGDIRRLVTRQVLLPMYRFQHIYLPPLYGLLGLKFRIQDFTDTFGTLTNGPIRVNPPS 302
BLAST of mRNA_Ecto-sp13_S_contig15998.4394.1 vs. uniprot
Match: A0A485KGN4_9STRA (Aste57867_5066 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGN4_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.090e-72 Identity = 127/256 (49.61%), Postives = 150/256 (58.59%), Query Frame = 1
Query: 1 VVDWMDKHPGGSEVVHLMAGRDATDAFASYHPFTDKPQKMLPKFEIGTLVS-REFTPYKRDESGFYREMCKRVG-----------------------------------------------------QALPLLHVMHDSSHTAFGRTQNWHSFGGRLFMDFYAGANLTSWHYQHVVGHHIYTNVFGADPDLPETAEGDPRRLVHRQKNASMYKYQHLYLPPLYGILGLKFRIQDLTGTFFGKTNGPVRVNPISLYR 606
V W+DKHPGG E+V + +GR+ATD+F SYHPF+ K + +L K+EIGT EF YK D +GFY+E+ KRVG QALPLLHVMHDSSH AF F GRLFMD++AGA++ SW QHV+GHHIYTNV GADPDLP D RRLV RQ MY YQHLYLPPLYG+LGLKFR QD T TF TNGP+RVNP S+++
Sbjct: 51 VTQWVDKHPGGREMVLIHSGREATDSFDSYHPFSGKAESVLAKYEIGTFTGPTEFPVYKPD-TGFYKELRKRVGDYFKQNKLDHQAGFAGFWRMVVVVAVAAVAFYAMNFSRIYPIRVLAAAVFGICQALPLLHVMHDSSHAAFTNKPIIREFAGRLFMDWFAGASMVSWLNQHVIGHHIYTNVAGADPDLPVNFTSDLRRLVERQVFQPMYAYQHLYLPPLYGLLGLKFRFQDFTDTFCSLTNGPIRVNPPSVFQ 305
BLAST of mRNA_Ecto-sp13_S_contig15998.4394.1 vs. uniprot
Match: A0A1V9ZN17_9STRA (Delta(5) fatty acid desaturase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZN17_9STRA) HSP 1 Score: 230 bits (586), Expect = 2.620e-70 Identity = 121/253 (47.83%), Postives = 146/253 (57.71%), Query Frame = 1
Query: 1 VVDWMDKHPGGSEVVHLMAGRDATDAFASYHPFTDKPQKMLPKFEIGTLVSREFTPYKRDESGFYREMCKRVG-----------------------------------------------------QALPLLHVMHDSSHTAFGRTQNWHSFGGRLFMDFYAGANLTSWHYQHVVGHHIYTNVFGADPDLPETAEGDPRRLVHRQKNASMYKYQHLYLPPLYGILGLKFRIQDLTGTFFGKTNGPVRVNPISL 600
V +W +KHPGG E+V L AGR+ATD F SYHPF+DK + +L K+EIGT P + ++GFY+E KRVG QALPLLHVMHDSSH ++ +H GR MD++AG ++ SW QHVVGHHIYTNV G+DPDLP +GD RR+V RQ MY +QHLYLPPLYG+LGLKFRIQD T TF TNGPVRVNP +L
Sbjct: 50 VTEWANKHPGGREMVLLHAGREATDTFDSYHPFSDKAESILKKYEIGTFTGPTEFPTFKPDTGFYKECRKRVGEYFKKNKLHPQAGFAGLWRMTIVFAVAAVALYGMHFSSCFSVQLAAAALFGVCQALPLLHVMHDSSHASYTNVPFFHYVVGRFAMDWFAGGSMVSWLNQHVVGHHIYTNVAGSDPDLPVNMDGDVRRIVDRQVFKGMYAFQHLYLPPLYGVLGLKFRIQDFTETFGSHTNGPVRVNPHAL 302
BLAST of mRNA_Ecto-sp13_S_contig15998.4394.1 vs. uniprot
Match: A0A067CQD0_SAPPC (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQD0_SAPPC) HSP 1 Score: 229 bits (583), Expect = 1.180e-69 Identity = 120/253 (47.43%), Postives = 146/253 (57.71%), Query Frame = 1
Query: 1 VVDWMDKHPGGSEVVHLMAGRDATDAFASYHPFTDKPQKMLPKFEIGTLVSREFTPYKRDESGFYREMCKRVG-----------------------------------------------------QALPLLHVMHDSSHTAFGRTQNWHSFGGRLFMDFYAGANLTSWHYQHVVGHHIYTNVFGADPDLPETAEGDPRRLVHRQKNASMYKYQHLYLPPLYGILGLKFRIQDLTGTFFGKTNGPVRVNPISL 600
V +W KHPGG E+V L AGR+ATD F SYHPF+DK + +L K+EIGT P + +SGFY+E KRVG QALPLLHVMHDSSH ++ +H GR MD++AG ++ SW QHVVGHHIYTNV G+DPDLP +GD RR+V+RQ MY +QH+YLPPLYG+LGLKFRIQD T TF TNGP+RVNP +L
Sbjct: 69 VTEWATKHPGGREMVLLHAGREATDTFDSYHPFSDKAESILNKYEIGTFTGPTEFPTFKPDSGFYKECRKRVGEYFKKNNLHPQDGFPGLWRMMLVFAVAGLALYGMHFSTIFALQLAAAALFGVCQALPLLHVMHDSSHASYTNMPFFHYVVGRFAMDWFAGGSMVSWLNQHVVGHHIYTNVAGSDPDLPVNMDGDIRRIVNRQVFQPMYAFQHIYLPPLYGVLGLKFRIQDFTDTFGSHTNGPIRVNPHAL 321
BLAST of mRNA_Ecto-sp13_S_contig15998.4394.1 vs. uniprot
Match: Q8H0N8_PHYME (Delta 5 fatty acid desaturase n=1 Tax=Phytophthora megasperma TaxID=4788 RepID=Q8H0N8_PHYME) HSP 1 Score: 224 bits (571), Expect = 5.430e-68 Identity = 122/256 (47.66%), Postives = 147/256 (57.42%), Query Frame = 1
Query: 1 VVDWMDKHPGGSEVVHLMAGRDATDAFASYHPFTDKPQKMLPKFEIGTLVS-REFTPYKRDESGFYREMCKRVGQ-------------------------------------------------------ALPLLHVMHDSSHTAFGRTQNWHSFGGRLFMDFYAGANLTSWHYQHVVGHHIYTNVFGADPDLPETAEGDPRRLVHRQKNASMYKYQHLYLPPLYGILGLKFRIQDLTGTFFGKTNGPVRVNPISL 600
V +W D+HPGG E+V L +GR+ TD F SYHPF+D+ K+L K+ IG LV EF YK D +GFY+E C RV Q ALPLLHVMHD+SH A + GRL MD+ AGAN+ SW QHVVGHHIYTNV GADPDLP + D RR+V+RQ +YKYQHLYLPPLYG+LGLKFR+QD+ TF TNGP+RVNP+S+
Sbjct: 55 VTEWADRHPGGRELVLLHSGRECTDTFDSYHPFSDRADKILAKYAIGKLVGGSEFPTYKPD-TGFYKECCDRVNQYFKDNKLDPRSPYSGLWRMILVAIVGAVAYMGMNQLLPGNIYAHYAWGALFGVCQALPLLHVMHDASHAAITSSPTGWRLIGRLAMDWVAGANMVSWLNQHVVGHHIYTNVAGADPDLPVDFKSDVRRIVYRQVLLPIYKYQHLYLPPLYGVLGLKFRVQDVFETFVTLTNGPLRVNPLSV 309 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15998.4394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15998.4394.1 >prot_Ecto-sp13_S_contig15998.4394.1 ID=prot_Ecto-sp13_S_contig15998.4394.1|Name=mRNA_Ecto-sp13_S_contig15998.4394.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=198bp MDKHPGGSEVVHLMAGRDATDAFASYHPFTDKPQKMLPKFEIGTLVSREFback to top mRNA from alignment at Ecto-sp13_S_contig15998:3..3690- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15998.4394.1 ID=mRNA_Ecto-sp13_S_contig15998.4394.1|Name=mRNA_Ecto-sp13_S_contig15998.4394.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3688bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15998:3..3690- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15998:3..3690- >mRNA_Ecto-sp13_S_contig15998.4394.1 ID=mRNA_Ecto-sp13_S_contig15998.4394.1|Name=mRNA_Ecto-sp13_S_contig15998.4394.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=594bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15998:3..3690- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |