mRNA_Ecto-sp13_S_contig15981.4384.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15981.4384.1 vs. uniprot
Match: D7FM38_ECTSI (SGNH_hydro domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM38_ECTSI) HSP 1 Score: 521 bits (1343), Expect = 1.990e-186 Identity = 257/273 (94.14%), Postives = 265/273 (97.07%), Query Frame = 1
Query: 1 GTAFGMALSAVLRSKYTASK--TGQQREAVRPKVICFGDSLTQYGFDAERLGWLSLLAHWWERRFDVVNRGFSGYNTRWLLPLMDRLFVPSGNTPVKLVTIFLGANDCVLPGNAQYVPLQEYKENLKFMAAHVRMVHKEARVMLITPPPIHESKWMEHRQFQAREMDRKQEATMSYAMACAEVGKEIGAKVVDAYRLMGSGAEDAADEYLHDGVHFTAEGNRRLFEGVKAEIRASFPELVPDTEEEGGMVSIQAPHFSEVDPSNPRDSVLRGL 813
GTAFGMALSAVLRSKYTASK QQREAVRPKVICFGDSLTQ+GFDAERLGWLSLLAHWWERRFDVVNRGFSGYNTRWL+PLMDRLFVP GNTPVKLVTIFLGANDCVLPGNAQYVPLQEYKENLK MAAHVR VHKEAR+MLITPPPIHE KWMEHRQFQAR+MDRKQEATMSYA+ACAEVGKEIGAKVVDAYRLMGSGAEDAADEYLHDGVHFTAEGNRRLFEGVKAEIRASFPELVPDTEEEGG+VS+QAPHFSEVDP+NPRDSVLRGL
Sbjct: 18 GTAFGMALSAVLRSKYTASKGVKKQQREAVRPKVICFGDSLTQFGFDAERLGWLSLLAHWWERRFDVVNRGFSGYNTRWLMPLMDRLFVPGGNTPVKLVTIFLGANDCVLPGNAQYVPLQEYKENLKLMAAHVRTVHKEARLMLITPPPIHERKWMEHRQFQARDMDRKQEATMSYAVACAEVGKEIGAKVVDAYRLMGSGAEDAADEYLHDGVHFTAEGNRRLFEGVKAEIRASFPELVPDTEEEGGVVSMQAPHFSEVDPTNPRDSVLRGL 290
BLAST of mRNA_Ecto-sp13_S_contig15981.4384.1 vs. uniprot
Match: A0A836CKV6_9STRA (SGNH hydrolase-type esterase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKV6_9STRA) HSP 1 Score: 196 bits (499), Expect = 2.180e-58 Identity = 107/278 (38.49%), Postives = 154/278 (55.40%), Query Frame = 1
Query: 31 VLRSKYTASKTGQQREAVRPKVICFGDSLTQYGFDAERLGWLSLLAHWWERRFDVVNRGFSGYNTRWLLPLMDRLFVPSGNTPVKLVTIFLGANDCVLPGNAQYVPLQEYKENLKFMAAHVRMVHKEA-----------------RVMLITPPPIHESKWMEHRQFQAREMDRKQEATMSYAMACAEVGKEIGAKVVDAYRLMGSGAEDAADEYLHDGVHFTAEGNRRLFEGVKAEIRASFPELVPDTEEEGGMVSIQAPHFSEVDPSNPRDSVLRGL 813
+L K + E+ P++I FGDS+TQYGFDAE++GWL+ V N + R + ++DRLF P LVT+FLG ND VLPG Q+VPL EY+ N+ + H+R + +A +++LI P P+H KW HR Q R +DR QE T+ YA AC + +++G VD + +GSG ++ AD+YLHDG+H +AEGN LF ++ I A++P L PDT + +QAP VD +P +S+LR L
Sbjct: 26 ILNKKLRQHERDDGAESAPPRMIAFGDSVTQYGFDAEKMGWLA----------QVCN-----VHLRLHVIMLDRLFKAGAAQPTALVTVFLGINDAVLPGEKQHVPLPEYRANMNAIVNHLRTAYPDAAKRLMVPSQCPSAPFCVQLVLIAPAPVHLGKWEAHRAKQGRPLDRSQEHTLQYARACLALARDMGVPAVDLHTALGSGDQELADKYLHDGLHLSAEGNAVLFTELQRTILAAYPHLDPDT------MKMQAPWHGHVDEDSPEESILRDL 282
BLAST of mRNA_Ecto-sp13_S_contig15981.4384.1 vs. uniprot
Match: K8Z6E0_NANGC (Isoamyl acetate-hydrolyzing esterase 1-like protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z6E0_NANGC) HSP 1 Score: 180 bits (457), Expect = 2.670e-51 Identity = 96/237 (40.51%), Postives = 144/237 (60.76%), Query Frame = 1
Query: 85 RPKVICFGDSLTQYGFDAERLGWLSLLAHWWERRFDVVNRGFSGYNTRWLLPLMDRLFVPSGNTPVK---LVTIFLGANDCVLPGNAQYVPLQEYKENLKFMAAHVRMVHKE----ARVMLITPPPIHESKWMEHRQFQAREMDRKQEATMSYAMACAEVGKEIGAKVVDAYRLMGSGAEDAADEYLHDGVHFTAEGNRRLFEGVKAEIRASFPELVPDTEEEGGMVSIQAPHFSEV 774
RPK++ FGDSLTQ GF+ GW + LAH + RR D+VNRGFSGY T+W + RLF P+G+ + L +FLGAND LP Q+VP+ EY+++L+ + +H++ +E RV+L+TPPP+ E++W H Q + R +DRK E T YA A V +E+ VVD +R +G + +A L DG+H +A+G+ ++E V I ++P+L P + +QAP E+
Sbjct: 110 RPKILLFGDSLTQRGFEGPGQGWAAGLAHAYGRRADIVNRGFSGYTTKWCALMAPRLF-PAGDPAWEVPALAIVFLGANDAALPSREQHVPVHEYEQHLRRIVSHLQGRRREDGSATRVLLLTPPPVDEARWEVHCQSRGRPLDRKNEVTRLYARASKGVAREMQVPVVDLWRRLGGRSPEAVAPNLGDGLHLSAQGSVLVYEAVLTAIEENYPDLAPS------QLPMQAPEHFEL 339
BLAST of mRNA_Ecto-sp13_S_contig15981.4384.1 vs. uniprot
Match: A0A0L0HIV6_SPIPD (SGNH_hydro domain-containing protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HIV6_SPIPD) HSP 1 Score: 172 bits (437), Expect = 2.200e-49 Identity = 97/232 (41.81%), Postives = 137/232 (59.05%), Query Frame = 1
Query: 55 SKTGQQREAVRPKVICFGDSLTQYGFDAERLGWLSLLAHWWERRFDVVNRGFSGYNTRW----LLPLMDRLFVPSGNTPVKLVTIFLGANDCVLP-GNAQYVPLQEYKENLKFMAAHVRMVHKEARVMLITPPPIHESKWMEHRQFQAREMDRKQEATMSYAMACAEVGKEIGAKVVDAYRL-MGSGA---EDAADEYLHDGVHFTAEGNRRLFEGVKAEIRASFPELVPDT 723
S+T R +++ FGDSLTQ+ F+ E GW + L++ + R+ DVVNRGFSGYNT W + P++ R +PS ++LVT+FLGAND LP Q+VPL Y++NL + A +R R++LITPPPIHE KW +H + R ++ T+ Y AC EV +E ++D + + G GA E+ AD L DGVH GNR L V A+I +P+L P+T
Sbjct: 6 SETDTLRAIHLDQILLFGDSLTQWSFNPEIEGWGAFLSNSYVRKLDVVNRGFSGYNTEWCKHIIAPIL-RTVLPSPGAQIRLVTVFLGANDATLPFWPQQHVPLSAYRDNLHSIIASIRNFSSNTRILLITPPPIHEGKWQKHCGQKGRSINLSVSNTLQYRNACIEVAREAKVPLLDTWEVYFGEGATYNEEKADAVLSDGVHLANLGNRLLGHAVLAKILTEWPDLAPET 236
BLAST of mRNA_Ecto-sp13_S_contig15981.4384.1 vs. uniprot
Match: UPI001ABE0209 (isoamyl acetate-hydrolyzing esterase 1 homolog n=6 Tax=Bufo TaxID=8383 RepID=UPI001ABE0209) HSP 1 Score: 168 bits (425), Expect = 8.990e-48 Identity = 99/249 (39.76%), Postives = 146/249 (58.63%), Query Frame = 1
Query: 88 PKVICFGDSLTQYGFDAERLGWLSLLAHWWERRFDVVNRGFSGYNTRWLLPLMDRLFVPSGN----TPVKLVTIFLGANDCVL--PGNAQYVPLQEYKENLKFMAAHVRMVH-KEARVMLITPPPIHESKWMEHRQFQAREMDRKQEATMSYAMACAEVGKEIGAKVVDAYRLMGSGAEDAADEYLHDGVHFTAEGNRRLFEGVKAEIRASFPELVPDTEEEGGMVSIQAPHFSEVDPSNPRDSVLRGL 813
P+V+ FGDS+TQ+ F+ GW + LA+ R+ DV+NRG SGYNTRW ++ +L +P G + VTIF GAND + Q+VPL+EY ENL+ M +++ V+ KE +++LI PPPIHE W +H + +++R T +YA ACA+VG E GA VVD + LM G D YL DG+H + EGN+ L +L P E++ G + P++++VD +NP S+ + L
Sbjct: 5 PRVLLFGDSITQFAFETN--GWGATLANKLVRKCDVLNRGLSGYNTRWAKQILPKL-IPDGARASAADIAAVTIFFGANDSSIREQNPQQHVPLEEYAENLRSMVQYLKSVNIKEEKIVLIAPPPIHEPSWEKHCFMKGYKLNRLNAVTEAYARACAQVGNEYGADVVDLWTLMQEGGSDYT-VYLSDGLHLSEEGNQFLES-----------KLWPLLEKKLGTLPFILPYWNDVDNNNPESSLFQNL 238
BLAST of mRNA_Ecto-sp13_S_contig15981.4384.1 vs. uniprot
Match: A0A7S4M5V7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M5V7_9STRA) HSP 1 Score: 164 bits (414), Expect = 4.360e-46 Identity = 85/223 (38.12%), Postives = 134/223 (60.09%), Query Frame = 1
Query: 82 VRPKVICFGDSLTQYGFDAE-RLGWLSLLAHWWERRFDVVNRGFSGYNTRWLLPLMDRLFVPSGNTPVK---LVTIFLGANDCVLPGNAQYVPLQEYKENLKFMAAHVRMVHK------EARVMLITPPPIHESKWMEHRQFQAREMD-RKQEATMSYAMACAEVGKEIGAKVVDAYRLMGSGAEDAADEYLHDGVHFTAEGNRRLFEGVKAEIRASFPELVP 717
+R K++ FGDS+TQ+GF A+ GW+S+LA+ + RR DV+NRGFSGYNTR L ++ + G + + T+F GAND LPG Q+VP++EY EN++ + ++R K + ++LITPPP+H+ W R+ R EA+ +Y A VG E+G ++D Y L+ G + +++L DG+H GN +++G+ IRA++P+L P
Sbjct: 1 MRSKILLFGDSITQFGFGADGAFGWVSMLANAYTRRADVLNRGFSGYNTRHALDVLPSVLGEDGKSSGRDTIFCTVFFGANDAALPGTRQHVPIEEYSENIRLVVGNMRANLKGSVDGDDVPIILITPPPVHDKGWERWCTEMGRDKSQRSNEASRAYGEALKSVGTELGCSILDTYSLL-EGDKPGFEKHLTDGLHLNGSGNEVIYDGLMNMIRANYPDLAP 222
BLAST of mRNA_Ecto-sp13_S_contig15981.4384.1 vs. uniprot
Match: Q5KCM4_CRYNJ (SGNH_hydro domain-containing protein n=6 Tax=Cryptococcus TaxID=5206 RepID=Q5KCM4_CRYNJ) HSP 1 Score: 165 bits (417), Expect = 5.230e-46 Identity = 101/260 (38.85%), Postives = 147/260 (56.54%), Query Frame = 1
Query: 94 VICFGDSLTQY---GFDAERLGWLSLLAHWWERRFDVVNRGFSGYNTRWLLPLMDRLFVPS------GNTPVKLVTIFLGANDCVLPGNAQYVPLQEYKENLKFMAAHVR-----MVHKEARVMLITPPPIHESKWMEHRQFQAR---------EMDRKQEATMSYAMACAEVGKEIGAKVVDAYRLMGSGAEDAADE----YLHDGVHFTAEGNRRLFEGVKAEIRASFPELVPDTEEEGGMVSIQAPHFSEVDPSNPR 792
V+ FGDSLTQ G A+R+ + ++ RR DV+NRGF GYN+ W +P+ +++F G VKL+TI+LGAND LP + Q+VPL +YK N+K + +R +E R++LI+PPPI E+ W+E R + + E +R E T YA C EVG E+G VVD + + A DE Y +DG+H T+EG LF+ V I A++PEL P+T + ++ PH+++VD NPR
Sbjct: 28 VMLFGDSLTQAWSAGSFAQRM------SEFYLRRADVINRGFGGYNSEWAIPVFEQVFATKKDREQGGIQQVKLITIWLGANDACLPSSPQHVPLDKYKSNVKHIVNLIRDPSSPYHSQETRIVLISPPPIIETAWIESRLEKWKSFGCEGPEPEQNRDAEVTKQYAEGCKEVGAELGVPVVDFWTAVVEAAGGEKDEQLAPYFYDGLHLTSEGYAVLFKAVSGLILATYPELNPET------MPMRMPHWADVDTENPR 275
BLAST of mRNA_Ecto-sp13_S_contig15981.4384.1 vs. uniprot
Match: A0A397VC46_9GLOM (SGNH hydrolase n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397VC46_9GLOM) HSP 1 Score: 161 bits (407), Expect = 6.090e-45 Identity = 90/249 (36.14%), Postives = 142/249 (57.03%), Query Frame = 1
Query: 91 KVICFGDSLTQYGFDAERLGWLSLLAHWWERRFDVVNRGFSGYNTRW---LLP-LMDRLFVPSGNTPVKLVTIFLGANDCVLPGNAQYVPLQEYKENLKFMAAHVR-----MVHKEARVMLITPPPIHESKWMEHRQFQAREMDRKQEATMSYAMACAEVGKEIGAKVVDAYRLMGSGAEDAADEYLHDGVHFTAEGNRRLFEGVKAEIRASFPELVPDTEEEGGMVSIQAPHFSEVDPSNPRDSVLRG 810
+++ FGDS+TQYG D E GW++ L + R+ +V+NRGFSGYNT W LLP L+ + + PS + L+ IF GAND V+ + Q+V + +YKENL +M ++ + E +++LITPPP+ E+ W E + EM+RK + T YA C E E+ VV+ ++++ +YL DG+H + GN+ LF V I++S+P++ P+ V P++ +VDP S+ G
Sbjct: 7 QIVLFGDSITQYGHDPETNGWVAALQSSYVRKLEVLNRGFSGYNTEWAKILLPQLLPKNYSPSNFPKIILLIIFFGANDAVIESSIQHVNIDKYKENLIYMVNLIKNPTSPYYNPETKILLITPPPMDENSWEETCASKGDEMNRKADITKKYAEVCVETALELNVPVVNLWKIINDHV--TVKDYLSDGLHLNSLGNKTLFISVMDVIKSSWPDIDPEN------VQDLFPNWRDVDPKILESSLKLG 247
BLAST of mRNA_Ecto-sp13_S_contig15981.4384.1 vs. uniprot
Match: A0A388LUK5_CHABU (SGNH_hydro domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LUK5_CHABU) HSP 1 Score: 160 bits (405), Expect = 2.530e-44 Identity = 98/254 (38.58%), Postives = 146/254 (57.48%), Query Frame = 1
Query: 85 RPKVICFGDSLTQYGFDAERLGWLSLLAHWWERRFDVVNRGFSGYNTRWLLPLMDRLFVPSGNT-----------PVKLVTIFLGANDCVLPGNA---QYVPLQEYKENLKFMAAHVRMVHKEARVMLITPPPIHESKWMEH-RQFQAREMD---RKQEATMSYAMACAEVGKEIGAKVVDAYRLMGSGAEDAADEYLHDGVHFTAEGNRRLFEGVKAEI----RASFPELVPDTEEEGGMVSIQAPHFSEVDP 780
RPK+I FGDSLT++ F +R GW +LLA + R+ DVVNRG+SGYNT W L L+D+LF P +T P ++VT+F GAND V+ A +VPL+EY++NL + H++ V K V+LI PPP+ + H R+ ++D R E+ YA AC +VG+E+G V+D +++M G D YL DG+HF+ EGN +F+ + + R+ LV + + + P F ++DP
Sbjct: 22 RPKIILFGDSLTEWAF--QRTGWGALLADRYARKADVVNRGYSGYNTCWALHLLDKLF-PKKDTSSPPPPLGPPQPREMVTVFFGANDAVVENGAAAKHHVPLEEYRQNLSTIVQHLQKVSKSTFVVLIAPPPVDSVAHLNHCRRELGTDLDDCGRSNESVGLYAEACVQVGREMGVPVIDLWKMMQEGGGDWK-RYLCDGLHFSEEGNAFVFDALMRVVEEHGRSGEESLVAEE------MPMDYPSFEDIDP 265
BLAST of mRNA_Ecto-sp13_S_contig15981.4384.1 vs. uniprot
Match: A0A167JE47_PHYB8 (SGNH_hydro domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167JE47_PHYB8) HSP 1 Score: 158 bits (400), Expect = 7.360e-44 Identity = 93/249 (37.35%), Postives = 146/249 (58.63%), Query Frame = 1
Query: 91 KVICFGDSLTQYGFDAERLGWLSLLAHWWERRFDVVNRGFSGYNTRWLLPLMDRLF--VPSGNTPVK--LVTIFLGANDCVLPGNAQYVPLQEYKENLKFMAAHVRM-----VHKEARVMLITPPPIHESKWMEHRQFQAREMDRKQEATMSYAMACAEVGKEIGAKVVDAY-RLMGSGAEDAAD--EYLHDGVHFTAEGNRRLFEGVKAEIRASFPELVPDTEEEGGMVSIQAPHFSEVDPSNPRDSV 801
K++ FGDS+TQ+ FD G+ + +A+ ++R+ DV+NRGFSGYNT W +P++ +L V P K L+TIF GAND LP + Q+VPL++YK+NL+ + + VR + R++LITPPPI+E +W + ++DRK E T YA VGKE V++ + ++ E D ++L DG+H ++ GN+ +E I FPEL PD + ++ P+F ++DP N D++
Sbjct: 7 KIVLFGDSITQFSFDPLFQGFGASIANAYQRKIDVMNRGFSGYNTTWAIPILRQLLPTVEQQKQPAKIQLLTIFFGANDGALPISFQHVPLEKYKKNLEELISMVRSPSSPYYNPSLRLVLITPPPINEVQWKVVCEENGIQLDRKFETTRLYAECARNVGKEHKIPVINLWDEILDRAKEQNRDLSQFLSDGLHLSSLGNQTAYELFMEVINTHFPELHPDA------LEMELPYFRDIDPKNYLDAL 249 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15981.4384.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15981.4384.1 >prot_Ecto-sp13_S_contig15981.4384.1 ID=prot_Ecto-sp13_S_contig15981.4384.1|Name=mRNA_Ecto-sp13_S_contig15981.4384.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=267bp MALSAVLRSKYTASKTGQQREAVRPKVICFGDSLTQYGFDAERLGWLSLLback to top mRNA from alignment at Ecto-sp13_S_contig15981:1..3423+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15981.4384.1 ID=mRNA_Ecto-sp13_S_contig15981.4384.1|Name=mRNA_Ecto-sp13_S_contig15981.4384.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3423bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15981:1..3423+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15981:1..3423+ >mRNA_Ecto-sp13_S_contig15981.4384.1 ID=mRNA_Ecto-sp13_S_contig15981.4384.1|Name=mRNA_Ecto-sp13_S_contig15981.4384.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=801bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15981:1..3423+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |