mRNA_Ecto-sp13_S_contig15962.4377.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15962.4377.1 vs. uniprot
Match: D8LH90_ECTSI (Folate-binding protein YgfZ n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH90_ECTSI) HSP 1 Score: 144 bits (364), Expect = 6.100e-39 Identity = 74/88 (84.09%), Postives = 78/88 (88.64%), Query Frame = 1
Query: 1 QGCYIGQESISRVNAYNAVSKALYGVSFEDSASPQEGTELFVQETAKRRVVLGIVAGVVTSMLDRDATSHPFGLAYIRTKAGGVGLKV 264
+GCYIGQESISRVNAYNAVSKALYGVSFEDS SP++GTELFVQET K AGVVTSMLDRDATSHPFGLAYIRTKAGGVGLK+
Sbjct: 384 KGCYIGQESISRVNAYNAVSKALYGVSFEDSTSPEQGTELFVQETGKS-------AGVVTSMLDRDATSHPFGLAYIRTKAGGVGLKL 464
BLAST of mRNA_Ecto-sp13_S_contig15962.4377.1 vs. uniprot
Match: A0A6H5JC00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC00_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 1.480e-16 Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = 2
Query: 5 AATSDKSPSPELMPTTPSVKPSTGCPSRTRRRPKRGQSFSCRRPQRGE 148
AATSDKSPSPEL PTTPS KPSTGCPSRTR RPKRGQSFSCR+P+RG+
Sbjct: 383 AATSDKSPSPELTPTTPSAKPSTGCPSRTRPRPKRGQSFSCRKPERGD 430
BLAST of mRNA_Ecto-sp13_S_contig15962.4377.1 vs. uniprot
Match: A0A352ADM4_9CYAN (Folate-binding protein YgfZ n=1 Tax=Cyanobacteria bacterium UBA9273 TaxID=2055791 RepID=A0A352ADM4_9CYAN) HSP 1 Score: 75.9 bits (185), Expect = 2.720e-14 Identity = 43/89 (48.31%), Postives = 56/89 (62.92%), Query Frame = 1
Query: 1 QGCYIGQESISRVNAYNAVSKALYGVSFEDSASPQEGTELFVQETAKRRVVLGIVAGVVTSMLDRDATSHPFGLAYIRTKAGGVGLKVR 267
+GCYIGQE+I+R+N Y + + L+GV E SA P GT + V G G +TS + + S PFGLAYIRTKAGG+GLKV+
Sbjct: 243 KGCYIGQETIARLNTYKGIKQKLWGVRLEASAQP--GTAITVD---------GDKVGKLTSFTETE--SSPFGLAYIRTKAGGIGLKVQ 318
BLAST of mRNA_Ecto-sp13_S_contig15962.4377.1 vs. uniprot
Match: L8MD78_9CYAN (Folate-binding protein YgfZ n=1 Tax=Xenococcus sp. PCC 7305 TaxID=102125 RepID=L8MD78_9CYAN) HSP 1 Score: 70.9 bits (172), Expect = 1.740e-12 Identity = 42/91 (46.15%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 1 QGCYIGQESISRVNAYNAVSKALYGVSFEDS---ASPQEGTELFVQETAKRRVVLGIVAGVVTSMLDRDATSHPFGLAYIRTKAGGVGLKV 264
+GCYIGQE+I+R+N YN V + L+GV F DS A ++ + T + + V GV+TS A PF LAY+RTKAGGVGL V
Sbjct: 221 KGCYIGQETIARLNTYNGVKQKLWGVKFADSDLQAMTEDSLAMGTPITLEDKKV-----GVLTSFA--IANQKPFALAYVRTKAGGVGLSV 304
BLAST of mRNA_Ecto-sp13_S_contig15962.4377.1 vs. uniprot
Match: A0A6P0UYW0_9CYAN (Folate-binding protein YgfZ n=3 Tax=Oscillatoriales TaxID=1150 RepID=A0A6P0UYW0_9CYAN) HSP 1 Score: 69.7 bits (169), Expect = 4.870e-12 Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 1 QGCYIGQESISRVNAYNAVSKALYGVSFEDSASPQEGTELFVQETAKRRVVLGIVAGVVTSMLDRDATSHPFGLAYIRTKAGGVGLKVR 267
+GCYIGQE+I+R+N Y V + L+GV+ SA P GT + + G G +TS + D + FGL YIRTKAGGVGLKV+
Sbjct: 251 KGCYIGQETIARLNTYKGVKQRLWGVNLNGSAQP--GTVVTSE---------GTKVGTLTSFTNTDQGA--FGLVYIRTKAGGVGLKVQ 326
BLAST of mRNA_Ecto-sp13_S_contig15962.4377.1 vs. uniprot
Match: A0A352X9I6_9CYAN (Folate-binding protein YgfZ n=1 Tax=Cyanobacteria bacterium UBA11367 TaxID=2055774 RepID=A0A352X9I6_9CYAN) HSP 1 Score: 69.7 bits (169), Expect = 5.030e-12 Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 1
Query: 1 QGCYIGQESISRVNAYNAVSKALYGVSFEDSASPQEGTELFVQETAKRRVVLGIVAGVVTSMLDRDATSHPFGLAYIRTKAGGVGLKVR 267
+GCYIGQE+I+R+N Y V + L+G+ + A P GT + V + G +TS+ + D S FGLAYIRTKAGG+GLKV+
Sbjct: 258 KGCYIGQETIARLNTYKGVKQRLWGIRLQAPAQP--GTIITVDDDK---------VGKLTSVTETD--SGIFGLAYIRTKAGGIGLKVK 333
BLAST of mRNA_Ecto-sp13_S_contig15962.4377.1 vs. uniprot
Match: A0A2W1JWK9_9CYAN (Aminomethyltransferase n=2 Tax=Acaryochloris TaxID=155977 RepID=A0A2W1JWK9_9CYAN) HSP 1 Score: 69.7 bits (169), Expect = 5.190e-12 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 1
Query: 1 QGCYIGQESISRVNAYNAVSKALYGVSFEDSASPQEGTELFVQETAKRRVVLGIVAGVVTSMLDRDATSHPFGLAYIRTKAGGVGLKVR 267
+GCYIGQE+I+R+N YN V + L+G+ E+SA P G L +++ R+V G++TS + GL YI+TKAGG GLKV+
Sbjct: 265 KGCYIGQETIARLNTYNGVKQQLWGIQLEESAEP--GASLLLED---RKV------GILTSQV--QTADGYLGLGYIKTKAGGAGLKVQ 340
BLAST of mRNA_Ecto-sp13_S_contig15962.4377.1 vs. uniprot
Match: UPI001ACD07F5 (Folate-binding protein n=1 Tax=Phormidium pseudopriestleyi FRX01 TaxID=1759528 RepID=UPI001ACD07F5) HSP 1 Score: 67.4 bits (163), Expect = 5.590e-12 Identity = 41/89 (46.07%), Postives = 51/89 (57.30%), Query Frame = 1
Query: 1 QGCYIGQESISRVNAYNAVSKALYGVSFEDSASPQEGTELFVQETAKRRVVLGIVAGVVTSMLDRDATSHPFGLAYIRTKAGGVGLKVR 267
+GCYIGQE+I+R+N Y V L+GV ASP GT + + E G +TS D PFGLAYIRTKAGG GL+V+
Sbjct: 79 KGCYIGQETIARLNTYKGVKVQLWGVKLTAPASP--GTVVTMGEEK---------VGTLTSYT--DTPQGPFGLAYIRTKAGGAGLQVQ 154
BLAST of mRNA_Ecto-sp13_S_contig15962.4377.1 vs. uniprot
Match: UPI0019F8076E (Folate-binding protein YgfZ n=1 Tax=Oscillatoriaceae cyanobacterium M7585_C2015_266 TaxID=2774341 RepID=UPI0019F8076E) HSP 1 Score: 68.9 bits (167), Expect = 9.010e-12 Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 1
Query: 1 QGCYIGQESISRVNAYNAVSKALYGVSFEDSASPQEGTELFVQETAKRRVVLGIVAGVVTSMLDRDATSHPFGLAYIRTKAGGVGLKVR 267
+GCYIGQE+I+R+N Y V + L+GV ASP GT + V E G +TS+ + + + FGLAYIR+KAGGVGLKVR
Sbjct: 246 KGCYIGQETIARLNTYKGVKQHLWGVRLNAPASP--GTIITVGEEK---------VGTLTSITETE--NGLFGLAYIRSKAGGVGLKVR 321
BLAST of mRNA_Ecto-sp13_S_contig15962.4377.1 vs. uniprot
Match: UPI00034A8CA6 (folate-binding protein YgfZ n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI00034A8CA6) HSP 1 Score: 68.9 bits (167), Expect = 9.050e-12 Identity = 42/89 (47.19%), Postives = 53/89 (59.55%), Query Frame = 1
Query: 1 QGCYIGQESISRVNAYNAVSKALYGVSFEDSASPQEGTELFVQETAKRRVVLGIVAGVVTSMLDRDATSHPFGLAYIRTKAGGVGLKVR 267
+GCYIGQE+I+R+N Y V + L+GV ASP GT + V E G +TS + + PFGLAYIRTKAGG GL+VR
Sbjct: 246 KGCYIGQETIARLNTYKGVKQHLWGVRLSAPASP--GTVVTVGEEK---------VGKLTSYTETER--GPFGLAYIRTKAGGAGLQVR 321 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15962.4377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15962.4377.1 >prot_Ecto-sp13_S_contig15962.4377.1 ID=prot_Ecto-sp13_S_contig15962.4377.1|Name=mRNA_Ecto-sp13_S_contig15962.4377.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=90bp QGCYIGQESISRVNAYNAVSKALYGVSFEDSASPQEGTELFVQETAKRRVback to top mRNA from alignment at Ecto-sp13_S_contig15962:3387..3985- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15962.4377.1 ID=mRNA_Ecto-sp13_S_contig15962.4377.1|Name=mRNA_Ecto-sp13_S_contig15962.4377.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=599bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15962:3387..3985- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15962:3387..3985- >mRNA_Ecto-sp13_S_contig15962.4377.1 ID=mRNA_Ecto-sp13_S_contig15962.4377.1|Name=mRNA_Ecto-sp13_S_contig15962.4377.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=270bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15962:3387..3985- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |