prot_Ecto-sp13_S_contig1595.4366.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1595.4366.1
Unique Nameprot_Ecto-sp13_S_contig1595.4366.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length114
Homology
BLAST of mRNA_Ecto-sp13_S_contig1595.4366.1 vs. uniprot
Match: A0A6H5JKS8_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKS8_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 4.170e-57
Identity = 97/116 (83.62%), Postives = 97/116 (83.62%), Query Frame = 0
Query:    1 INWGSVRRAVSGGAGRLRREARALGIFGGXXXXXXXXXXXX--ADAAPAAEAA-AEVVLTACAECGVNPAKTPYVTGCGHVFCYYCARVACTVDPRYACPRCGEYFATSRRWSQPR 113
            INWG VRRAVSGGAGRLRREARA GIFGG              AD APAAEAA AEVVLTACAECG NPAKTPYVTGCGHVFCYYCARVACTVDPRYACPRCGEYFATSRRWSQPR
Sbjct:  318 INWGFVRRAVSGGAGRLRREARAFGIFGGSSGGAGRVSARGLGADTAPAAEAAVAEVVLTACAECGANPAKTPYVTGCGHVFCYYCARVACTVDPRYACPRCGEYFATSRRWSQPR 433          
BLAST of mRNA_Ecto-sp13_S_contig1595.4366.1 vs. uniprot
Match: W7TYI4_9STRA (Peroxin-2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYI4_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.710e-16
Identity = 46/109 (42.20%), Postives = 57/109 (52.29%), Query Frame = 0
Query:    1 INWGSVRRAVSGGAGRLRREARALGIFGGXXXXXXXXXXXXADAAPAAEAAAEVVLTACAECGVNPAKTPYVTGCGHVFCYYCARVACTVDPRYACPRCGEYFATSRRW 109
            ++W  +RR VSG    L R+ RA     G  XX          A    E         C  CG   A+TPYVT CGH++CYYC + AC  D  ++CPRCG +FATSRRW
Sbjct:  336 VDWDGLRRQVSG----LIRQRRAGAWAAGAGXXGGSEFRGAGGADGDME---------CVVCGEESAQTPYVTDCGHIYCYYCLKTACLQDDSFSCPRCGTFFATSRRW 431          
BLAST of mRNA_Ecto-sp13_S_contig1595.4366.1 vs. uniprot
Match: A0A1W0A7A5_9STRA (Peroxin-2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7A5_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 8.050e-15
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 0
Query:   56 LTACAECGVNPAKTPYVTGCGHVFCYYCARVACTVDPRYACPRCGEYFATSRR 108
            LTACA C V PAKTPY+T CGH +CY+C + A  +DP Y C  CGE F +S R
Sbjct:  260 LTACALCSVTPAKTPYITSCGHQYCYFCLQTAVAMDPNYTCAMCGEVFESSER 312          
BLAST of mRNA_Ecto-sp13_S_contig1595.4366.1 vs. uniprot
Match: A0A1V9ZKW2_9STRA (Peroxin-2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKW2_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.090e-13
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
Query:   56 LTACAECGVNPAKTPYVTGCGHVFCYYCARVACTVDPRYACPRCGEYFATSRR 108
            L  C  CG++PAKTPY+T CGH +CY+C + A   DP YAC  CG+ F +S R
Sbjct:  260 LAPCTICGISPAKTPYITSCGHQYCYFCLQTAVATDPTYACATCGDTFESSER 312          
BLAST of mRNA_Ecto-sp13_S_contig1595.4366.1 vs. uniprot
Match: UPI00064503DB (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064503DB)

HSP 1 Score: 70.9 bits (172), Expect = 4.650e-12
Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 0
Query:   43 DAAPAAEAAAEVVLTACAECGVNPAKTPYVTGCGHVFCYYCARVACTVDPRYACPRCGEYFATSRRWS 110
            DAA A +  A +VL  C  C  +P   PY+T CGH+FCYYC +  C +DP + CPRC    +  +R++
Sbjct:  269 DAALAPQLLAPLVLEKCPICFNDPISVPYITDCGHLFCYYCIKTNCMIDPTFTCPRCNSIVSNMKRFT 336          
BLAST of mRNA_Ecto-sp13_S_contig1595.4366.1 vs. uniprot
Match: A0A067C940_SAPPC (Peroxin-2 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C940_SAPPC)

HSP 1 Score: 68.9 bits (167), Expect = 1.970e-11
Identity = 27/52 (51.92%), Postives = 32/52 (61.54%), Query Frame = 0
Query:   59 CAECGVNPAKTPYVTGCGHVFCYYCARVACTVDPRYACPRCGEYFATSRRWS 110
            CA C   PAKTPY+T CGH +CYYC + A   DP + C  CG+ F  S R S
Sbjct:  263 CALCNATPAKTPYITTCGHQYCYYCLQTAVATDPTFVCATCGDVFDASERLS 314          
BLAST of mRNA_Ecto-sp13_S_contig1595.4366.1 vs. uniprot
Match: A0A485KU83_9STRA (Peroxin-2 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KU83_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.590e-8
Identity = 26/62 (41.94%), Postives = 36/62 (58.06%), Query Frame = 0
Query:   52 AEVVLTACAECGVNPAKTPYVTGCGHVFCYYCARVACTVDPRYACPRCGEYFATSRRWSQPR 113
            A  +   C  C  +PAKTPY T CGHV+CYYC + A + +  + C  CG+ F +S+R    R
Sbjct:  256 ARALQNGCPICLTSPAKTPYKTSCGHVYCYYCLQSAVSSNADFVCVVCGDLFESSQRLGNDR 317          
BLAST of mRNA_Ecto-sp13_S_contig1595.4366.1 vs. uniprot
Match: A0A507DDU9_9FUNG (Peroxin-2 n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DDU9_9FUNG)

HSP 1 Score: 60.8 bits (146), Expect = 1.730e-8
Identity = 22/37 (59.46%), Postives = 27/37 (72.97%), Query Frame = 0
Query:   69 TPYVTGCGHVFCYYCARVACTVDPRYACPRCGEYFAT 105
            TPY +GCGHV+CYYC + A   DPR+ CPRCGE   +
Sbjct:  325 TPYKSGCGHVYCYYCVKSAMMADPRFPCPRCGEVITS 361          
BLAST of mRNA_Ecto-sp13_S_contig1595.4366.1 vs. uniprot
Match: W4GX78_9STRA (Peroxin-2 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GX78_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.050e-8
Identity = 24/50 (48.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query:   59 CAECGVNPAKTPYVTGCGHVFCYYCARVACTVDPRYACPRCGEYFATSRR 108
            C  C   PAKTPY T CGH++CY+C + +    P +AC  CG+ F TS R
Sbjct:  265 CPICLAVPAKTPYQTSCGHIYCYFCLQSSVAAHPDFACVVCGDRFDTSHR 314          
BLAST of mRNA_Ecto-sp13_S_contig1595.4366.1 vs. uniprot
Match: L8HGF4_ACACA (Pex2 / Pex12 amino terminal regioncontaining protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HGF4_ACACA)

HSP 1 Score: 59.3 bits (142), Expect = 5.730e-8
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = 0
Query:   59 CAECGVNPAKTPYVTGCGHVFCYYCARVACTVDPRYACPRCGE 101
            C  C  +PA +PY++ CGH+FCYYC + A  VD  YACP C  
Sbjct:  272 CGVCQADPAHSPYLSDCGHLFCYYCIKTAMMVDRSYACPSCNH 314          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1595.4366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JKS8_9PHAE4.170e-5783.62RING-type domain-containing protein n=2 Tax=Ectoca... [more]
W7TYI4_9STRA1.710e-1642.20Peroxin-2 n=1 Tax=Nannochloropsis gaditana TaxID=7... [more]
A0A1W0A7A5_9STRA8.050e-1558.49Peroxin-2 n=1 Tax=Thraustotheca clavata TaxID=7455... [more]
A0A1V9ZKW2_9STRA2.090e-1352.83Peroxin-2 n=1 Tax=Achlya hypogyna TaxID=1202772 Re... [more]
UPI00064503DB4.650e-1242.65hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A067C940_SAPPC1.970e-1151.92Peroxin-2 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A... [more]
A0A485KU83_9STRA1.590e-841.94Peroxin-2 n=1 Tax=Aphanomyces stellatus TaxID=1203... [more]
A0A507DDU9_9FUNG1.730e-859.46Peroxin-2 n=1 Tax=Synchytrium endobioticum TaxID=2... [more]
W4GX78_9STRA4.050e-848.00Peroxin-2 n=1 Tax=Aphanomyces astaci TaxID=112090 ... [more]
L8HGF4_ACACA5.730e-851.16Pex2 / Pex12 amino terminal regioncontaining prote... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 44..109
e-value: 4.7E-7
score: 31.1
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 75..84
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 59..99
score: 9.553
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 59..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1595contigEcto-sp13_S_contig1595:14788..16480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1595.4366.1mRNA_Ecto-sp13_S_contig1595.4366.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1595 14788..16480 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1595.4366.1 ID=prot_Ecto-sp13_S_contig1595.4366.1|Name=mRNA_Ecto-sp13_S_contig1595.4366.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=114bp
INWGSVRRAVSGGAGRLRREARALGIFGGSGSGRASARGLGADAAPAAEA
AAEVVLTACAECGVNPAKTPYVTGCGHVFCYYCARVACTVDPRYACPRCG
EYFATSRRWSQPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR001841Znf_RING