mRNA_Ecto-sp13_S_contig15942.4363.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15942.4363.1
Unique NamemRNA_Ecto-sp13_S_contig15942.4363.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: D7G610_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G610_ECTSI)

HSP 1 Score: 774 bits (1999), Expect = 3.720e-280
Identity = 363/380 (95.53%), Postives = 374/380 (98.42%), Query Frame = 1
Query:    1 RCQARLDGTETAKRARERELGDDEDAIAFNKHDCPYAITNAKVAQRQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKSKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVEGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRCI 1140
            R QARLDGTET KRARERELGDDEDAIAFNKHDC YAI NAKVA++QRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCK+KQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDV+GVDLGRCP DIIWENRGAMQMAGL+NPER+KYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRID+VTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLG+AKSSLV+FLSYHSTANRVYYPWRC+ DLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTP+QRAEMLGYNVTTTFQRCI
Sbjct:   26 RYQARLDGTETGKRARERELGDDEDAIAFNKHDCTYAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPIDIIWENRGAMQMAGLDNPERNKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRCI 405          
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: A0A6H5K2F3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2F3_9PHAE)

HSP 1 Score: 372 bits (956), Expect = 3.370e-120
Identity = 190/433 (43.88%), Postives = 238/433 (54.97%), Query Frame = 1
Query:  100 CPYAITNAKVAQRQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKSKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVEGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGDRNPPGGA---------------------------------------------------------------------------------------GNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
            CPY I  A+ A  +  D ++ GNVVKV HL F RTGN F + +RNLALGYCCKSK VWLPPKDDVLAPG+FN+GTPGPRWFDFSSAPDV+G D   C  DI W  + A  M  L++PE   + P +++C+A+APRLL CEAAYYFP+D+ +C                                                                                                          GNLVLHVRSGDIF D+V+ Y GQPPLQFYL ++Q   WD +DIVTN Q  D +NPV+PAL AM   G LPD+V+ HT R+M EDL SM CAD L +A+S+LV    +HS A RVY P +C+   ++LA +RP+ + YG+  D +G Y VY+ WENTP+QR EML Y+    F +C
Sbjct:   94 CPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGQRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDLCHATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNLVLHVRSGDIFSDKVLAYYGQPPLQFYLQVIQHADWDSVDIVTNSQEHDGLNPVIPALQAMVDAGDLPDSVHVHTNRTMEEDLLSMFCADGLALARSTLVSLTGFHSKAKRVYGPHQCNAQFKQLALIRPEVQAYGI--DWAGEYGVYKSWENTPEQREEMLAYDKIVGFNQC 524          
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: A0A6H5K7B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B3_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 1.230e-102
Identity = 174/395 (44.05%), Postives = 237/395 (60.00%), Query Frame = 1
Query:  100 CPYAITNAKVAQRQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKSKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVEGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAV--CP---------------------RKKKPFLAL--GDRNP----------------------PGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNG--QNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
            CPYAI + + A+ +  +++  GNVV VT   + R GNRF ++ R+L+LGYCCKS+ + LPPKD+ LAPG FNEG PGPR FDFSSAPDVEG D   CP +I W    A  + GL +     Y P + +C+ + PR+ GCEAAY+FP+D+AV  CP                     R   P + L  G+R                         G AGNLV+HVRSGDIF  R  P  GQPPLQ+Y+  +QDQ WDR+D+VT+G       +NPVVPAL A  A G L  N++FH  R++GEDL+ M+CAD    A+S+L H +S+HS+A R+Y+P  C+E L+ L+  RP T+V+G+    +  Y+VY+ W NT DQ  EM+ ++V   F++C
Sbjct:  147 CPYAIPSEEEARERSGNTSAPGNVVVVTDFNYCRLGNRFTSMSRSLSLGYCCKSRLLSLPPKDEQLAPGRFNEGIPGPRNFDFSSAPDVEGFDYSSCPPEITWGGTNAFHLQGLRDEGHPYYTPELFECIKELPRIAGCEAAYFFPKDMAVDMCPLDETAERDHNNSNVRDVSEKPRDDAPGVRLDWGERGQGREATXXXXXXXXXXXXXXXXXEGSAGNLVVHVRSGDIFV-RPHPDYGQPPLQYYVRAIQDQEWDRVDVVTDGIVDETHAINPVVPALEAKVAEGELAGNIHFHKNRTIGEDLRYMICADGFVAARSTLRHVVSHHSSAKRMYFPMACNEKLKTLSTERPGTQVFGM-ASWNDQYTVYQRWNNTADQLTEMMTFDVGG-FEQC 538          
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: D7G2M2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2M2_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 9.090e-102
Identity = 179/394 (45.43%), Postives = 226/394 (57.36%), Query Frame = 1
Query:   79 IAFNKHDCPYAITNAKVAQRQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKSKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVEGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGD------------RNPPG--------------GAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNGQN--WDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADS-LGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRELARLRPKT------------KVYGLQLDRSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
             AFN  DCPY +       R R D  I GNV+ +   +FGR GNRF A+  NL LGYCCKSK V LP KDD LAPGIF EGTPGPRW+DF++APDVEG D   CP DI W  R A  + GL+NP    Y P++  C+   PRL GCEAAY+FP  + VC   +    A GD            R+ PG               A  LV+HVRSGDIF D   P  GQPPLQ+Y+  ++ Q WDR+DIVTNG+    + +NPV+PAL  M A G L  N+YFH +R+M ED  SM+C    L  A+SSL   L++HS+A+R+Y+P  C+  L    R  P              KVYG++      YS+   W NT DQ  EML +NV++ F++C
Sbjct:  118 FAFNP-DCPYILRTPGERLRMR-DPAIPGNVLTINDFRFGRLGNRFWALGVNLKLGYCCKSKLVSLPAKDDTLAPGIFGEGTPGPRWYDFTNAPDVEGFDASSCPADITWGGREAFHLLGLDNPSHPYYSPNLSTCVETVPRLTGCEAAYFFPMGVDVCLSDRT---ATGDVVHEQRGNGASGRSGPGVKKNLVGSEEEEGRPANTLVIHVRSGDIFVDPAAPGYGQPPLQYYVRAIKHQKWDRVDIVTNGRTKKMNVMNPVIPALEVMFAEGELTGNIYFHKDRTMEEDFLSMMCVGGGLVTARSSLSLLLAHHSSASRLYFPRPCAGSLEFYTRGSPDASLNDLDDELQAVKVYGVKPPGMERYSLDVSWNNTADQVNEMLTFNVSS-FEQC 505          
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: D7G1L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L4_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 3.940e-92
Identity = 170/395 (43.04%), Postives = 225/395 (56.96%), Query Frame = 1
Query:  100 CPYAITNAKVAQRQRHD-------STIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKSKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVEGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAV--CP-------------------RKKKPFLALG-------------------DRNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNGQNWDN--VNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
            CPYAI  A+    +R D       ++  GNVV VT   + R GNRF+++ R+L+LGYCCKS+ V LPPKDD LAPG FN+GTPGPR FDFSSAPDVEG D   CP +I W    A  + GL +     Y P +  C+ + P ++GCEAAY+FP D+AV  CP                   +   P + L                         G AGNLV+HVRSGDIF     P  GQ    +Y+  +QDQ WDR+D+VTNG    N  +NP+VPAL A  A G LP N++FH  R+M EDL SM+CAD    A+S+L   +S+ S+A R+Y+P  C+E+L+ L    P T+V+G+       Y+V+R W NT DQ AEM+  +V   F++C
Sbjct:  146 CPYAIL-AEEEGHERSDRGGDGGNTSAPGNVVVVTDFNYCRLGNRFLSMGRSLSLGYCCKSRLVSLPPKDDQLAPGRFNDGTPGPRNFDFSSAPDVEGFDSSSCPPEIKWGGTQAFHLEGLRDEGHPYYTPGLFTCIKELPWIIGCEAAYFFPTDMAVPMCPLDETAEGGNKNVRDISEKPKDDAPGIQLDWEESGHGREATEQXXXXXXXXXXXGSAGNLVMHVRSGDIFVSPAHPGYGQ----YYVQAIQDQQWDRVDVVTNGIEDKNHAINPIVPALEAKVAKGQLPGNIHFHKNRTMEEDLLSMICADGFVAARSTLGRVVSHLSSAKRMYFPTSCNEELKNLGTEGPGTQVFGM-ASWDHEYTVFRRWNNTADQIAEMMTADVGG-FEQC 533          
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: A0A6H5L7B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B0_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 1.590e-41
Identity = 116/391 (29.67%), Postives = 194/391 (49.62%), Query Frame = 1
Query:  100 CPYAITNAKVAQRQRHDSTIEGNVVKVTHLQ-FGRTGNRFMAVYRNLALGYCCKSKQVWLPPKDDVL----------APGIFN-----EGTPGPRWFDFSSAPDVEGVD--LGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIA---VCPRKKKPF---------LALGDRNP--PGGAGNLVLHVRSGDIFFDRVVPYK-GQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRE-----------LARLRPKTKVYGLQL-DRSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
            CP AI+  + A  +R      G V+ ++ ++  GR+GN +MA+    ++ +CC+ K + LP  D  L          +  +F+          P++ + S   D EG+   L  CP++ + +   A  + GL         PH++ CM    ++ GCEAAY   + +     CP  ++           L  G  +P    GAG+LV+HVRSGDIF    + ++ GQPPL +YL ++  +PW+++  VT+G++ D +NP    +  + + G L  NV  H +R + EDLQ+MLCADSL ++ S+  + L  HS A R + PW C   + +           +   R + +VYG++    S +Y+VY  W+ + +   EM+  +     QRC
Sbjct:   48 CPQAISPDE-ADIRRSTRGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRHTNRAPPQYINGSLPTDFEGLQGRLDVCPHERLIDGTHANHIRGLH--------PHLQKCMRNV-KMRGCEAAY-LKESLGGEHACPSPQRQLAEREDESAQLVAGTTSPLERRGAGSLVVHVRSGDIFKPGTIYHQYGQPPLLYYLAVIASKPWNKMSFVTSGED-DLLNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGCEPQVGDTTLNHFANATMICLQRSEVEVYGIEWRTTSEAYTVYDSWDPSSNL-LEMVVSDSVKGMQRC 425          
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 3.680e-40
Identity = 124/382 (32.46%), Postives = 179/382 (46.86%), Query Frame = 1
Query:   76 AIAFNKHDCPYAITNAKVAQRQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKSKQVWLPPKDDVLAPGIFNEG--TPGPRWFDFSSA-PDVEGVD-LGRCPNDIIWENRGAMQMAGLENPERSKYL-PHIRDCMAKAPRLLGCEAAYYFPQ-DI-AVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYK----GQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSED-LRELARL---------------RPKTKVYGLQLD-RSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
            A  F    CP A++ ++ A+          N + +     GR+GN F+ +   LA+G+CC+S+ + LP  D  + PG    G    G RWFDFS   P   G + LG  P       R  M+  G +N    +++   +  CM +   L GCE AY     D+   CP K++P    G R    GAG+LV+H+RSGDIF       +    GQPPLQ+YL ++ ++ WD +  +T   N   +NP    L  M   G L DNV     RS+ ED++ MLCAD+L  ++SS+      HS A   + P  C     R + R                +P  +VYG      S  YSVY+ W +TP+Q  EM  +      Q+C
Sbjct:   81 ANLFQSAGCPQALSRSQ-AEAALDGGNSTSNTITLLSFGSGRSGNHFLMISSYLAMGFCCRSRLLTLPEVDTAM-PGDDEGGGFKAGERWFDFSRVTPPWPGFEQLGDNPEVC----RPQME-DGADNAFGYEHIHSRLLRCMNRV-YLRGCEKAYLGKMVDLEGFCP-KQEP----GKRK---GAGSLVVHIRSGDIFNPNEEGRRRTEFGQPPLQYYLHVLGEKDWDNVTFLTAAWNQKAINPTFSILEVMAKAGTLGDNVRLLKNRSLLEDVREMLCADALATSRSSMSFLTFAHSRATTFFVPTPCGNGGFRRMRRPPVKATFDNTTLLLLEKPDAEVYGTAWPGNSPKYSVYQAWHDTPEQLLEMATFGGIEGVQKC 446          
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: A0A6H5JNM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM4_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 2.840e-36
Identity = 119/391 (30.43%), Postives = 177/391 (45.27%), Query Frame = 1
Query:  100 CPYAITNAKVAQRQRHDSTIEGNVVKVTHLQ-FGRTGNRFMAVYRNLALGYCCKSKQVWLPPKD---DVLAPGIF----------NEGTPGPR-----WFDFSSAPDVEGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQ--DIAVCPRKKKPFLALGDRNP---PG----------GAGNLVLHVRSGDIFF-DRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRELARLR---------PKTKVYGLQL-DRSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
            CP AI++ +   R   D +  G V+ VT L+  GR+GN +MA+    +L +CC  K + LP  D        G F          + GT G       W   +   D++G  +G CP   I +   A  + GL   +  + + H+         + GCEAAY      D + CP    P    G+      PG          G G+LV+H+RS DIF  D      GQPPL ++L ++  + WD + ++T+G +   +NP    +  +   G L  NV  H +RS  EDLQ+MLCADSL ++ S+L + L  HS A R + PW C      L   R          + +VYG+     S +Y+VY  W+   +   EM+  +     QRC
Sbjct:   54 CPQAISHDEALARTS-DPSWPGGVLNVTSLETVGRSGNHYMAISTMFSLAFCCGVKVLELPDTDYRFPTEEGGEFKSSKHLFSFSSHGTDGVEAERQTWSQLTGLEDLQGR-VGVCPKKRIVDGTHANHITGL-GKDLQRCIRHVH--------MRGCEAAYLQQVIGDESSCPDSPPPVGTDGEPTGLVVPGTTGLLPSETKGDGHLVVHIRSQDIFKPDTRYHQYGQPPLGYFLAVIASKKWDYLSVLTSGPD-KQLNPTYSVIAELNRQGFLGTNVEMHKDRSFWEDLQAMLCADSLALSHSTLSNLLLAHSRAKRFFLPWGCEPQPWTLKLNRFVNASMICLQRPEVYGIDWRTTSDAYTVYDSWDPNSNMM-EMVVSDAVKGVQRC 431          
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: D7FRV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV8_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 6.590e-34
Identity = 103/325 (31.69%), Postives = 159/325 (48.92%), Query Frame = 1
Query:  241 LGYCCKSKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSA--PDVEGVDLGRCPNDIIWENR-GAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQ-DI-AVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYK----GQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCS----------------EDLRELARLRPKTKVYGLQLDRSGS-YSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
            +G+CC+S+ + LP  DD L P   +  T   RWFDFS+   P  E  ++G        E + G  +  G E+       P + +CM +   L GCE AY     D+ + CP K++P    G R    GAG+LV H+RSGDIF      ++    GQPPLQ+YL ++  + WD +  +T       +NP    L  M   G L +NV+    R++  D++ MLCAD+L  ++SS+      HS A   + P  C                 ++   L   + +++V+G+   ++GS YSVY++W ++P Q  EM  Y      Q+C
Sbjct:    1 MGFCCRSRLLTLPATDDKL-PDELDNFTSARRWFDFSNVTVPWPEYQEMGDDQEVCRPETKDGGRKAFGYEDVH-----PKLLECMNRV-YLRGCEKAYLGKLVDVGSFCP-KQEP----GKRK---GAGSLVAHIRSGDIFNPDGEGHRRQGFGQPPLQYYLRVLAAKDWDNVTFLTAAWEDRALNPTFLTLEMMADAGVLGENVHLFNNRTLLTDMKEMLCADALATSRSSMSFLTFAHSRATTFFVPTPCGNGGFRRMKDVPVKATFDNTTLLLLEKRESEVFGVDWRQNGSDYSVYKNWLDSPHQLLEMTTYKGIKGLQKC 310          
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: A0A5C2HP59_9GAMM (Uncharacterized protein n=1 Tax=Ectothiorhodospiraceae bacterium BW-2 TaxID=947515 RepID=A0A5C2HP59_9GAMM)

HSP 1 Score: 73.6 bits (179), Expect = 2.360e-10
Identity = 51/176 (28.98%), Postives = 83/176 (47.16%), Query Frame = 1
Query:  619 LVLHVRSGDIFFDRVVPYK-GQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRELARLRPKTKVYGLQL---------DRSGSY--SVYRHWENTPDQRAEMLGY 1110
            L +H+R+GDIF D    +  GQPPL FY+ ++Q + W  + +V      D  NPVV AL        LP   Y     ++ +D+  +  A+ L + + +  + L   S   +  Y ++             KT V+GL+          D +G+Y  ++  +W NTP+QR +ML Y
Sbjct:  235 LTIHLRAGDIFSDNTPHFGYGQPPLAFYIAVLQQRRWHAVQLVYE----DEGNPVVAALKTELDNRKLP---YSIASGTLADDIAILAAAEHLVIGRGTFTYPLICLSKVVKTVYYFQID-----------KTAVWGLERSDIKFVLIQDINGNYQQTILANWRNTPEQRQQMLTY 392          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G610_ECTSI3.720e-28095.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K2F3_9PHAE3.370e-12043.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K7B3_9PHAE1.230e-10244.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2M2_ECTSI9.090e-10245.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G1L4_ECTSI3.940e-9243.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7B0_9PHAE1.590e-4129.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRV9_ECTSI3.680e-4032.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNM4_9PHAE2.840e-3630.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRV8_ECTSI6.590e-3431.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5C2HP59_9GAMM2.360e-1028.98Uncharacterized protein n=1 Tax=Ectothiorhodospira... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15942contigEcto-sp13_S_contig15942:501..3898 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeBacteria
Stop1
Start1
Seed ortholog score63.2
Seed ortholog evalue2.5e-07
Seed eggNOG ortholog459495.SPLC1_S380010
Model size1576
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.Methyltransferase FkbM domain
EggNOG OGs1GDGZ@1117,COG0457@1,COG0457@2
Cds size927
COG Functional cat.S
Best tax levelCyanobacteria
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15942.4363.1prot_Ecto-sp13_S_contig15942.4363.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15942 934..3478 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462842.7492516-UTR-Ecto-sp13_S_contig15942:500..9331681462842.7492516-UTR-Ecto-sp13_S_contig15942:500..933Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15942 501..933 -
1681462842.8200073-UTR-Ecto-sp13_S_contig15942:3478..36331681462842.8200073-UTR-Ecto-sp13_S_contig15942:3478..3633Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15942 3479..3633 -
1681462842.8477087-UTR-Ecto-sp13_S_contig15942:3837..38981681462842.8477087-UTR-Ecto-sp13_S_contig15942:3837..3898Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15942 3838..3898 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462842.7587843-CDS-Ecto-sp13_S_contig15942:933..10591681462842.7587843-CDS-Ecto-sp13_S_contig15942:933..1059Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15942 934..1059 -
1681462842.774284-CDS-Ecto-sp13_S_contig15942:1650..18241681462842.774284-CDS-Ecto-sp13_S_contig15942:1650..1824Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15942 1651..1824 -
1681462842.7850528-CDS-Ecto-sp13_S_contig15942:2174..23361681462842.7850528-CDS-Ecto-sp13_S_contig15942:2174..2336Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15942 2175..2336 -
1681462842.794044-CDS-Ecto-sp13_S_contig15942:2577..28191681462842.794044-CDS-Ecto-sp13_S_contig15942:2577..2819Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15942 2578..2819 -
1681462842.8034506-CDS-Ecto-sp13_S_contig15942:3018..31901681462842.8034506-CDS-Ecto-sp13_S_contig15942:3018..3190Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15942 3019..3190 -
1681462842.8120482-CDS-Ecto-sp13_S_contig15942:3427..34781681462842.8120482-CDS-Ecto-sp13_S_contig15942:3427..3478Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15942 3428..3478 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15942.4363.1

>prot_Ecto-sp13_S_contig15942.4363.1 ID=prot_Ecto-sp13_S_contig15942.4363.1|Name=mRNA_Ecto-sp13_S_contig15942.4363.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=309bp
MAVYRNLALGYCCKSKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDV
EGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGC
EAAYYFPQDIAVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVV
PYKGQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGA
LPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPW
RCSEDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPDQRAEMLGYNV
TTTFQRCI*
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mRNA from alignment at Ecto-sp13_S_contig15942:501..3898-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15942.4363.1 ID=mRNA_Ecto-sp13_S_contig15942.4363.1|Name=mRNA_Ecto-sp13_S_contig15942.4363.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3398bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15942:501..3898- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGTGTCAAGCACGGCTTGATGGAACGGAAACTGCAAAGCGAGCCAGGGA ACGGGAATTAGGTAAGCATGTGCATGCAATAAGACGAGCCGCCAAAAGGC TCTCCAGAGTAGACTTGATTTGGAATGCAAATACGAGGCCGCAGTTTCTG ACACGCACTTGTGAGTTGTCCGCAATCTCCGCATCGATGACTGCTCGGGT ACCCCCGCGTCGTTTGAACACCCGATGCTCCTCTTCATATGCCATGGCCA ACCTCACTTCGGCAGGTGATGATGAGGACGCCATCGCGTTCAACAAGCAC GACTGCCCGTACGCCATCACCAATGCCAAGGTGGCTCAACGACAACGACA TGACTCGACGATCGAGGGCAACGTCGTCAAAGTCACACATCTTCAGTTCG GCCGTACAGGCAACCGCTTCATGGCCGTGTACCGAAACTTGGCACTCGGA TACTGTTGCAAATCAAAGCAGGTAAGTAATGGCGGCACTGGATGCATGAG TACTCGCGTAGCACAAACCTTCGCCCGATGTCAATTGGTCTCGCTGGCGG TGATGGCAGAGACGATGCATGCAATGGCACTTCTGGTCGCCCGGCCCTCC CTGTCGCATAAGTTTTCCAGTTAGGATTACCGACTTCACGCACAAACTCT TCGAAATCAGTGCATGCGATTTGTCTGTGCCCACACGGAACCGTGTGATT CAATATAGGTGTGGCTGCCTCCGAAGGACGACGTACTCGCGCCTGGAATT TTCAACGAGGGAACTCCCGGCCCACGCTGGTTCGATTTTTCCAGCGCTCC GGATGTGGAGGGTGTTGACTTGGGCAGGTGTCCGAATGATATTATATGGG AAAACCGAGGGGCGATGCAGATGGCAGGATGTGAGTGATGGTCAAGCTAA GCACGGCCGTAATGCGGAGAAAACGCGCTGCAATTGTGGAACCTGTTCAG AAGCCCTCCTTGTTTTTGAGCTCTCTGCGTTTTTGACCGATTTTCGATCC CAATCAAGCTCGCAAACGCCAAACCTTTGTTGCTCTATATCGTGCCTCCC CTCCCGTAATGCATGCGTGCAAATAACAGTGGAAAACCCGGAGCGAAGCA AGTATCTCCCACACATTCGAGATTGTATGGCGAAAGCGCCGCGCCTACTA GGCTGCGAGGCCGCGTACTACTTTCCACAGGACATCGCCGTGTGCCCAAG AAAGAAAAAGCCATTTTTGGCCCTTGGGGATCGAAACCCACCTGGTGGGG CGGGGAACCTGGTGCTTCACGTGCGGTCTGGCGACATATTTTTCGACAGA GTCGTCCCTTACAAGGGTCAGGTAAAACCAAGCCTTCTTTGCCAGCATAT CCAGGTCCGATCCGTGCTTTTTGGCATTCGTTGGTGAGTTGAGCCCGTGA TGTCGGTTGGGCCCTCGTTCCATTACGCCGGTCAACGTCTTCGCCGAACA CGTCCCCCAGCCCACCTTCGACCGGTCCGCTTTTACCGAGTCGTTTCCTG TGTGAAACGTCACCTTCTCATGTCTCGACCCCCTTGTCTCATGCTGGACA ACAACCAAACAGCCCCCGCTGCAGTTCTACTTGCTGCTGATGCAAGACCA ACCGTGGGACCGCATTGACATTGTGACTAACGGGCAAAACTGGGACAACG TGAACCCAGTCGTGCCCGCTCTCATGGCCATGCGAGCAACGGGCGCGCTC CCGGACAACGTATACTTCCACACTGTGAGTCTATGAACTTGTACTGTCGT ACATTCCTCTGCTGGTGTTGTCGTGTTTGGGGTACAGTGTTTTGGCTTGA AAGGTGAACAGCATGCCGCCATAACAATGTTGCATACGCTTCCAGGAAAG TGCCGTCGTCACAACAGTACGGGGTGGACCGTCTTTATCAGTATTATCCA ACCGTATGTTCTCTCCATGGGGCAGGGTCTGACTTTGCGACGGGCGCATC GCCGATTGTTCTGGTAAATCCTAATGTTCACGCGCCCGCTATCTTCCAAG CTCGACTTGAGAACGATGCTTATCGTATGCGTATATTACGTGATGTGCAC GATCTGTCCGTTGGTTTCACTCAGGAACGATCGATGGGCGAGGACCTCCA GAGCATGCTTTGCGCCGATTCTCTTGGTGTGGCTAAATCTAGCCTGGTAC ACTTCCTCAGCTACCACTCAACCGCGAATCGGGTGTACTACCCGTGGCGG TGTAGCGAGGACCTCAGAGAGTTGGCCCGGCTTAGACCAAAGACCAAGGT GTGTATCCCTTTCTTGCCCTTTCATAGCCGGACGAAGGTTGACGTTACAA TGCGCTTTCCTGGAATGAGTGAAAGTCGAAAAACGATTCACTTTTTGGAG TCTGTTCGTCCGCCGAATGTGTATGCCTCTAGGTATTATCTGTTTCTGTC CCAGAGCGAAACGCGAGTGGTTCACTCTCTCTCTACGTTCTCGCTGTGTT TGGAGTCTACTCACGGCATCCTCTCCGATGCTACGGCACTCAAATATAAC TTATCAGGCACCAATCCAATTCATTGGCGGCCTGCTTCTCTCGAGTTTAT CCAGAAGCGTTCAGTGAGAGAAGTTTTATCGGAAGGAAGCTATCATGCAT GTACCACCCAGCCCTTGACGGAAGACTCCTTTTGGTAGGAAAGCGTCCCT TCCAACATGACCGATTCACAAGGTTGTCCGCATTTATCCACACGTATGAC AATCTCAGAGTTGACCTTCGAACGAACGTGGAGGCATGAGTAGCACACAT GGACCACACGCGCCCGACTCACGAGGGGGCCGTATCACCCCGCGCCTTAT TTTCACATGCAACCATTGCACCTGATTCCTTGGCACCAGGTGTATGGGCT ACAGCTTGATAGGAGCGGCTCGTATAGTGTCTACCGACATTGGGAGAACA CACCTGACCAGCGAGCCGAGATGCTGGGGTACAACGTCACAACTACGTTC CAGCGGTGCATATGAGCCAGCGGCGTCGCAGCCAAGTGATTTCACTGCGA TGGGGATCATGAGTGTGAACATTTGTTTGCTGTGTGGTGTAAAGTAGTGG TATATATCTTTTTCGAAGAAGGTGTTGCGATTGGTGGTGATGATGATGCT GTGCCGCGTGTAGTCAGGATCACTTGCACATTTTGACAGTTGTGAGCAGT TTGCCGTGCCTTTCGGGAGTGAATTTCAGCACTCATAGAAAAAGCGGCCC TCGTGATGTGGTGGCCATCATCCAAGGCGTCGATCGCTGGCCCACATCAT TAAACAAGAAATGCAGATCCGTGCATTGTCACGTGTATGTGGGGCTGCCT CATGCACACGTACTTTGTAGTGCGCACCATCATCATTCACAAGGCGGGCG CAGGATTCGACAGTCAAAGTGAAACTGGTGTCGGTGTGACTCTTTGCG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15942:501..3898-

>mRNA_Ecto-sp13_S_contig15942.4363.1 ID=mRNA_Ecto-sp13_S_contig15942.4363.1|Name=mRNA_Ecto-sp13_S_contig15942.4363.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=927bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15942:501..3898- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCGTGTACCGAAACTTGGCACTCGGATACTGTTGCAAATCAAAGCA
GGTGTGGCTGCCTCCGAAGGACGACGTACTCGCGCCTGGAATTTTCAACG
AGGGAACTCCCGGCCCACGCTGGTTCGATTTTTCCAGCGCTCCGGATGTG
GAGGGTGTTGACTTGGGCAGGTGTCCGAATGATATTATATGGGAAAACCG
AGGGGCGATGCAGATGGCAGGATTGGAAAACCCGGAGCGAAGCAAGTATC
TCCCACACATTCGAGATTGTATGGCGAAAGCGCCGCGCCTACTAGGCTGC
GAGGCCGCGTACTACTTTCCACAGGACATCGCCGTGTGCCCAAGAAAGAA
AAAGCCATTTTTGGCCCTTGGGGATCGAAACCCACCTGGTGGGGCGGGGA
ACCTGGTGCTTCACGTGCGGTCTGGCGACATATTTTTCGACAGAGTCGTC
CCTTACAAGGGTCAGCCCCCGCTGCAGTTCTACTTGCTGCTGATGCAAGA
CCAACCGTGGGACCGCATTGACATTGTGACTAACGGGCAAAACTGGGACA
ACGTGAACCCAGTCGTGCCCGCTCTCATGGCCATGCGAGCAACGGGCGCG
CTCCCGGACAACGTATACTTCCACACTGAACGATCGATGGGCGAGGACCT
CCAGAGCATGCTTTGCGCCGATTCTCTTGGTGTGGCTAAATCTAGCCTGG
TACACTTCCTCAGCTACCACTCAACCGCGAATCGGGTGTACTACCCGTGG
CGGTGTAGCGAGGACCTCAGAGAGTTGGCCCGGCTTAGACCAAAGACCAA
GGTGTATGGGCTACAGCTTGATAGGAGCGGCTCGTATAGTGTCTACCGAC
ATTGGGAGAACACACCTGACCAGCGAGCCGAGATGCTGGGGTACAACGTC
ACAACTACGTTCCAGCGGTGCATATGA
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