mRNA_Ecto-sp13_S_contig15942.4363.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: D7G610_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G610_ECTSI) HSP 1 Score: 774 bits (1999), Expect = 3.720e-280 Identity = 363/380 (95.53%), Postives = 374/380 (98.42%), Query Frame = 1
Query: 1 RCQARLDGTETAKRARERELGDDEDAIAFNKHDCPYAITNAKVAQRQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKSKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVEGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRCI 1140
R QARLDGTET KRARERELGDDEDAIAFNKHDC YAI NAKVA++QRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCK+KQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDV+GVDLGRCP DIIWENRGAMQMAGL+NPER+KYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRID+VTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLG+AKSSLV+FLSYHSTANRVYYPWRC+ DLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTP+QRAEMLGYNVTTTFQRCI
Sbjct: 26 RYQARLDGTETGKRARERELGDDEDAIAFNKHDCTYAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPIDIIWENRGAMQMAGLDNPERNKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRCI 405
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: A0A6H5K2F3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2F3_9PHAE) HSP 1 Score: 372 bits (956), Expect = 3.370e-120 Identity = 190/433 (43.88%), Postives = 238/433 (54.97%), Query Frame = 1
Query: 100 CPYAITNAKVAQRQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKSKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVEGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGDRNPPGGA---------------------------------------------------------------------------------------GNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
CPY I A+ A + D ++ GNVVKV HL F RTGN F + +RNLALGYCCKSK VWLPPKDDVLAPG+FN+GTPGPRWFDFSSAPDV+G D C DI W + A M L++PE + P +++C+A+APRLL CEAAYYFP+D+ +C GNLVLHVRSGDIF D+V+ Y GQPPLQFYL ++Q WD +DIVTN Q D +NPV+PAL AM G LPD+V+ HT R+M EDL SM CAD L +A+S+LV +HS A RVY P +C+ ++LA +RP+ + YG+ D +G Y VY+ WENTP+QR EML Y+ F +C
Sbjct: 94 CPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGQRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDLCHATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNLVLHVRSGDIFSDKVLAYYGQPPLQFYLQVIQHADWDSVDIVTNSQEHDGLNPVIPALQAMVDAGDLPDSVHVHTNRTMEEDLLSMFCADGLALARSTLVSLTGFHSKAKRVYGPHQCNAQFKQLALIRPEVQAYGI--DWAGEYGVYKSWENTPEQREEMLAYDKIVGFNQC 524
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: A0A6H5K7B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B3_9PHAE) HSP 1 Score: 328 bits (840), Expect = 1.230e-102 Identity = 174/395 (44.05%), Postives = 237/395 (60.00%), Query Frame = 1
Query: 100 CPYAITNAKVAQRQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKSKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVEGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAV--CP---------------------RKKKPFLAL--GDRNP----------------------PGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNG--QNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
CPYAI + + A+ + +++ GNVV VT + R GNRF ++ R+L+LGYCCKS+ + LPPKD+ LAPG FNEG PGPR FDFSSAPDVEG D CP +I W A + GL + Y P + +C+ + PR+ GCEAAY+FP+D+AV CP R P + L G+R G AGNLV+HVRSGDIF R P GQPPLQ+Y+ +QDQ WDR+D+VT+G +NPVVPAL A A G L N++FH R++GEDL+ M+CAD A+S+L H +S+HS+A R+Y+P C+E L+ L+ RP T+V+G+ + Y+VY+ W NT DQ EM+ ++V F++C
Sbjct: 147 CPYAIPSEEEARERSGNTSAPGNVVVVTDFNYCRLGNRFTSMSRSLSLGYCCKSRLLSLPPKDEQLAPGRFNEGIPGPRNFDFSSAPDVEGFDYSSCPPEITWGGTNAFHLQGLRDEGHPYYTPELFECIKELPRIAGCEAAYFFPKDMAVDMCPLDETAERDHNNSNVRDVSEKPRDDAPGVRLDWGERGQGREATXXXXXXXXXXXXXXXXXEGSAGNLVVHVRSGDIFV-RPHPDYGQPPLQYYVRAIQDQEWDRVDVVTDGIVDETHAINPVVPALEAKVAEGELAGNIHFHKNRTIGEDLRYMICADGFVAARSTLRHVVSHHSSAKRMYFPMACNEKLKTLSTERPGTQVFGM-ASWNDQYTVYQRWNNTADQLTEMMTFDVGG-FEQC 538
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: D7G2M2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2M2_ECTSI) HSP 1 Score: 325 bits (832), Expect = 9.090e-102 Identity = 179/394 (45.43%), Postives = 226/394 (57.36%), Query Frame = 1
Query: 79 IAFNKHDCPYAITNAKVAQRQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKSKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVEGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGD------------RNPPG--------------GAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNGQN--WDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADS-LGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRELARLRPKT------------KVYGLQLDRSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
AFN DCPY + R R D I GNV+ + +FGR GNRF A+ NL LGYCCKSK V LP KDD LAPGIF EGTPGPRW+DF++APDVEG D CP DI W R A + GL+NP Y P++ C+ PRL GCEAAY+FP + VC + A GD R+ PG A LV+HVRSGDIF D P GQPPLQ+Y+ ++ Q WDR+DIVTNG+ + +NPV+PAL M A G L N+YFH +R+M ED SM+C L A+SSL L++HS+A+R+Y+P C+ L R P KVYG++ YS+ W NT DQ EML +NV++ F++C
Sbjct: 118 FAFNP-DCPYILRTPGERLRMR-DPAIPGNVLTINDFRFGRLGNRFWALGVNLKLGYCCKSKLVSLPAKDDTLAPGIFGEGTPGPRWYDFTNAPDVEGFDASSCPADITWGGREAFHLLGLDNPSHPYYSPNLSTCVETVPRLTGCEAAYFFPMGVDVCLSDRT---ATGDVVHEQRGNGASGRSGPGVKKNLVGSEEEEGRPANTLVIHVRSGDIFVDPAAPGYGQPPLQYYVRAIKHQKWDRVDIVTNGRTKKMNVMNPVIPALEVMFAEGELTGNIYFHKDRTMEEDFLSMMCVGGGLVTARSSLSLLLAHHSSASRLYFPRPCAGSLEFYTRGSPDASLNDLDDELQAVKVYGVKPPGMERYSLDVSWNNTADQVNEMLTFNVSS-FEQC 505
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: D7G1L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L4_ECTSI) HSP 1 Score: 300 bits (769), Expect = 3.940e-92 Identity = 170/395 (43.04%), Postives = 225/395 (56.96%), Query Frame = 1
Query: 100 CPYAITNAKVAQRQRHD-------STIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKSKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVEGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAV--CP-------------------RKKKPFLALG-------------------DRNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNGQNWDN--VNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
CPYAI A+ +R D ++ GNVV VT + R GNRF+++ R+L+LGYCCKS+ V LPPKDD LAPG FN+GTPGPR FDFSSAPDVEG D CP +I W A + GL + Y P + C+ + P ++GCEAAY+FP D+AV CP + P + L G AGNLV+HVRSGDIF P GQ +Y+ +QDQ WDR+D+VTNG N +NP+VPAL A A G LP N++FH R+M EDL SM+CAD A+S+L +S+ S+A R+Y+P C+E+L+ L P T+V+G+ Y+V+R W NT DQ AEM+ +V F++C
Sbjct: 146 CPYAIL-AEEEGHERSDRGGDGGNTSAPGNVVVVTDFNYCRLGNRFLSMGRSLSLGYCCKSRLVSLPPKDDQLAPGRFNDGTPGPRNFDFSSAPDVEGFDSSSCPPEIKWGGTQAFHLEGLRDEGHPYYTPGLFTCIKELPWIIGCEAAYFFPTDMAVPMCPLDETAEGGNKNVRDISEKPKDDAPGIQLDWEESGHGREATEQXXXXXXXXXXXGSAGNLVMHVRSGDIFVSPAHPGYGQ----YYVQAIQDQQWDRVDVVTNGIEDKNHAINPIVPALEAKVAKGQLPGNIHFHKNRTMEEDLLSMICADGFVAARSTLGRVVSHLSSAKRMYFPTSCNEELKNLGTEGPGTQVFGM-ASWDHEYTVFRRWNNTADQIAEMMTADVGG-FEQC 533
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: A0A6H5L7B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B0_9PHAE) HSP 1 Score: 164 bits (414), Expect = 1.590e-41 Identity = 116/391 (29.67%), Postives = 194/391 (49.62%), Query Frame = 1
Query: 100 CPYAITNAKVAQRQRHDSTIEGNVVKVTHLQ-FGRTGNRFMAVYRNLALGYCCKSKQVWLPPKDDVL----------APGIFN-----EGTPGPRWFDFSSAPDVEGVD--LGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIA---VCPRKKKPF---------LALGDRNP--PGGAGNLVLHVRSGDIFFDRVVPYK-GQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRE-----------LARLRPKTKVYGLQL-DRSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
CP AI+ + A +R G V+ ++ ++ GR+GN +MA+ ++ +CC+ K + LP D L + +F+ P++ + S D EG+ L CP++ + + A + GL PH++ CM ++ GCEAAY + + CP ++ L G +P GAG+LV+HVRSGDIF + ++ GQPPL +YL ++ +PW+++ VT+G++ D +NP + + + G L NV H +R + EDLQ+MLCADSL ++ S+ + L HS A R + PW C + + + R + +VYG++ S +Y+VY W+ + + EM+ + QRC
Sbjct: 48 CPQAISPDE-ADIRRSTRGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRHTNRAPPQYINGSLPTDFEGLQGRLDVCPHERLIDGTHANHIRGLH--------PHLQKCMRNV-KMRGCEAAY-LKESLGGEHACPSPQRQLAEREDESAQLVAGTTSPLERRGAGSLVVHVRSGDIFKPGTIYHQYGQPPLLYYLAVIASKPWNKMSFVTSGED-DLLNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGCEPQVGDTTLNHFANATMICLQRSEVEVYGIEWRTTSEAYTVYDSWDPSSNL-LEMVVSDSVKGMQRC 425
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI) HSP 1 Score: 160 bits (406), Expect = 3.680e-40 Identity = 124/382 (32.46%), Postives = 179/382 (46.86%), Query Frame = 1
Query: 76 AIAFNKHDCPYAITNAKVAQRQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKSKQVWLPPKDDVLAPGIFNEG--TPGPRWFDFSSA-PDVEGVD-LGRCPNDIIWENRGAMQMAGLENPERSKYL-PHIRDCMAKAPRLLGCEAAYYFPQ-DI-AVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYK----GQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSED-LRELARL---------------RPKTKVYGLQLD-RSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
A F CP A++ ++ A+ N + + GR+GN F+ + LA+G+CC+S+ + LP D + PG G G RWFDFS P G + LG P R M+ G +N +++ + CM + L GCE AY D+ CP K++P G R GAG+LV+H+RSGDIF + GQPPLQ+YL ++ ++ WD + +T N +NP L M G L DNV RS+ ED++ MLCAD+L ++SS+ HS A + P C R + R +P +VYG S YSVY+ W +TP+Q EM + Q+C
Sbjct: 81 ANLFQSAGCPQALSRSQ-AEAALDGGNSTSNTITLLSFGSGRSGNHFLMISSYLAMGFCCRSRLLTLPEVDTAM-PGDDEGGGFKAGERWFDFSRVTPPWPGFEQLGDNPEVC----RPQME-DGADNAFGYEHIHSRLLRCMNRV-YLRGCEKAYLGKMVDLEGFCP-KQEP----GKRK---GAGSLVVHIRSGDIFNPNEEGRRRTEFGQPPLQYYLHVLGEKDWDNVTFLTAAWNQKAINPTFSILEVMAKAGTLGDNVRLLKNRSLLEDVREMLCADALATSRSSMSFLTFAHSRATTFFVPTPCGNGGFRRMRRPPVKATFDNTTLLLLEKPDAEVYGTAWPGNSPKYSVYQAWHDTPEQLLEMATFGGIEGVQKC 446
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: A0A6H5JNM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM4_9PHAE) HSP 1 Score: 149 bits (377), Expect = 2.840e-36 Identity = 119/391 (30.43%), Postives = 177/391 (45.27%), Query Frame = 1
Query: 100 CPYAITNAKVAQRQRHDSTIEGNVVKVTHLQ-FGRTGNRFMAVYRNLALGYCCKSKQVWLPPKD---DVLAPGIF----------NEGTPGPR-----WFDFSSAPDVEGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQ--DIAVCPRKKKPFLALGDRNP---PG----------GAGNLVLHVRSGDIFF-DRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRELARLR---------PKTKVYGLQL-DRSGSYSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
CP AI++ + R D + G V+ VT L+ GR+GN +MA+ +L +CC K + LP D G F + GT G W + D++G +G CP I + A + GL + + + H+ + GCEAAY D + CP P G+ PG G G+LV+H+RS DIF D GQPPL ++L ++ + WD + ++T+G + +NP + + G L NV H +RS EDLQ+MLCADSL ++ S+L + L HS A R + PW C L R + +VYG+ S +Y+VY W+ + EM+ + QRC
Sbjct: 54 CPQAISHDEALARTS-DPSWPGGVLNVTSLETVGRSGNHYMAISTMFSLAFCCGVKVLELPDTDYRFPTEEGGEFKSSKHLFSFSSHGTDGVEAERQTWSQLTGLEDLQGR-VGVCPKKRIVDGTHANHITGL-GKDLQRCIRHVH--------MRGCEAAYLQQVIGDESSCPDSPPPVGTDGEPTGLVVPGTTGLLPSETKGDGHLVVHIRSQDIFKPDTRYHQYGQPPLGYFLAVIASKKWDYLSVLTSGPD-KQLNPTYSVIAELNRQGFLGTNVEMHKDRSFWEDLQAMLCADSLALSHSTLSNLLLAHSRAKRFFLPWGCEPQPWTLKLNRFVNASMICLQRPEVYGIDWRTTSDAYTVYDSWDPNSNMM-EMVVSDAVKGVQRC 431
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: D7FRV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV8_ECTSI) HSP 1 Score: 140 bits (354), Expect = 6.590e-34 Identity = 103/325 (31.69%), Postives = 159/325 (48.92%), Query Frame = 1
Query: 241 LGYCCKSKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSA--PDVEGVDLGRCPNDIIWENR-GAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQ-DI-AVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYK----GQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCS----------------EDLRELARLRPKTKVYGLQLDRSGS-YSVYRHWENTPDQRAEMLGYNVTTTFQRC 1137
+G+CC+S+ + LP DD L P + T RWFDFS+ P E ++G E + G + G E+ P + +CM + L GCE AY D+ + CP K++P G R GAG+LV H+RSGDIF ++ GQPPLQ+YL ++ + WD + +T +NP L M G L +NV+ R++ D++ MLCAD+L ++SS+ HS A + P C ++ L + +++V+G+ ++GS YSVY++W ++P Q EM Y Q+C
Sbjct: 1 MGFCCRSRLLTLPATDDKL-PDELDNFTSARRWFDFSNVTVPWPEYQEMGDDQEVCRPETKDGGRKAFGYEDVH-----PKLLECMNRV-YLRGCEKAYLGKLVDVGSFCP-KQEP----GKRK---GAGSLVAHIRSGDIFNPDGEGHRRQGFGQPPLQYYLRVLAAKDWDNVTFLTAAWEDRALNPTFLTLEMMADAGVLGENVHLFNNRTLLTDMKEMLCADALATSRSSMSFLTFAHSRATTFFVPTPCGNGGFRRMKDVPVKATFDNTTLLLLEKRESEVFGVDWRQNGSDYSVYKNWLDSPHQLLEMTTYKGIKGLQKC 310
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Match: A0A5C2HP59_9GAMM (Uncharacterized protein n=1 Tax=Ectothiorhodospiraceae bacterium BW-2 TaxID=947515 RepID=A0A5C2HP59_9GAMM) HSP 1 Score: 73.6 bits (179), Expect = 2.360e-10 Identity = 51/176 (28.98%), Postives = 83/176 (47.16%), Query Frame = 1
Query: 619 LVLHVRSGDIFFDRVVPYK-GQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGVAKSSLVHFLSYHSTANRVYYPWRCSEDLRELARLRPKTKVYGLQL---------DRSGSY--SVYRHWENTPDQRAEMLGY 1110
L +H+R+GDIF D + GQPPL FY+ ++Q + W + +V D NPVV AL LP Y ++ +D+ + A+ L + + + + L S + Y ++ KT V+GL+ D +G+Y ++ +W NTP+QR +ML Y
Sbjct: 235 LTIHLRAGDIFSDNTPHFGYGQPPLAFYIAVLQQRRWHAVQLVYE----DEGNPVVAALKTELDNRKLP---YSIASGTLADDIAILAAAEHLVIGRGTFTYPLICLSKVVKTVYYFQID-----------KTAVWGLERSDIKFVLIQDINGNYQQTILANWRNTPEQRQQMLTY 392 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15942.4363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15942.4363.1 >prot_Ecto-sp13_S_contig15942.4363.1 ID=prot_Ecto-sp13_S_contig15942.4363.1|Name=mRNA_Ecto-sp13_S_contig15942.4363.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=309bp MAVYRNLALGYCCKSKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVback to top mRNA from alignment at Ecto-sp13_S_contig15942:501..3898- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15942.4363.1 ID=mRNA_Ecto-sp13_S_contig15942.4363.1|Name=mRNA_Ecto-sp13_S_contig15942.4363.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3398bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15942:501..3898- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15942:501..3898- >mRNA_Ecto-sp13_S_contig15942.4363.1 ID=mRNA_Ecto-sp13_S_contig15942.4363.1|Name=mRNA_Ecto-sp13_S_contig15942.4363.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=927bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15942:501..3898- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |