prot_Ecto-sp13_S_contig15909.4337.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15909.4337.1
Unique Nameprot_Ecto-sp13_S_contig15909.4337.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length55
Homology
BLAST of mRNA_Ecto-sp13_S_contig15909.4337.1 vs. uniprot
Match: D7G4V1_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V1_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 5.720e-24
Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 0
Query:    7 QVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGVKEGNGRIF 54
            +VEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVG KEGNGRIF
Sbjct:  263 KVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGAKEGNGRIF 310          
BLAST of mRNA_Ecto-sp13_S_contig15909.4337.1 vs. uniprot
Match: A0A835YV71_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV71_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 3.420e-13
Identity = 32/41 (78.05%), Postives = 35/41 (85.37%), Query Frame = 0
Query:    7 QVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGVK 47
            +VEDCID TLEPRPV YGA RRMARRFDE LIVE+E V V+
Sbjct:  221 KVEDCIDETLEPRPVSYGAKRRMARRFDEALIVEIEPVAVR 261          
BLAST of mRNA_Ecto-sp13_S_contig15909.4337.1 vs. uniprot
Match: A0A4D9CY48_9STRA (Peptidylprolyl isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY48_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.590e-8
Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    9 EDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMV 44
            EDC+D+T  P P  Y A RRM RRFDE+LIVEVE+V
Sbjct:  179 EDCLDMTRIPSPTSYAAKRRMGRRFDESLIVEVEVV 214          
BLAST of mRNA_Ecto-sp13_S_contig15909.4337.1 vs. uniprot
Match: I2CRD0_NANGC (Peptidylprolyl isomerase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRD0_NANGC)

HSP 1 Score: 56.2 bits (134), Expect = 7.650e-8
Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    9 EDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMV 44
            EDC+D+T  P P  Y A RRM RRFDE+LIVEVE+V
Sbjct:  269 EDCLDMTRIPSPTSYAAKRRMGRRFDESLIVEVEVV 304          
BLAST of mRNA_Ecto-sp13_S_contig15909.4337.1 vs. uniprot
Match: A0A7S1SCJ5_ALECA (Peptidylprolyl isomerase n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SCJ5_ALECA)

HSP 1 Score: 54.3 bits (129), Expect = 3.210e-7
Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    9 EDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGVKE 48
            E CID +  P+PV + + RR +RRFDE+LIVEVE+VG+ E
Sbjct:  217 ETCIDASKLPQPVDFASRRRFSRRFDESLIVEVELVGIGE 256          
BLAST of mRNA_Ecto-sp13_S_contig15909.4337.1 vs. uniprot
Match: B7G5J4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5J4_PHATC)

HSP 1 Score: 53.5 bits (127), Expect = 7.250e-7
Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0
Query:    6 LQVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGVKEG 49
            +  E C D + +P P  YG  RRMA+RFD++LI+EV++V VK G
Sbjct:  276 VDAEVCFDQSKQPFPTSYGQQRRMAQRFDQSLIMEVQLVAVKAG 319          
BLAST of mRNA_Ecto-sp13_S_contig15909.4337.1 vs. uniprot
Match: A0A7S1E5E0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E5E0_HEMAN)

HSP 1 Score: 52.0 bits (123), Expect = 1.820e-6
Identity = 20/43 (46.51%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    7 QVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGVKEG 49
            + ++C+D    P P  + A R++ RRFDET++VEVE+V V+EG
Sbjct:  176 EADNCLDTNRVPSPTTFQAKRKLGRRFDETVLVEVEVVAVREG 218          
BLAST of mRNA_Ecto-sp13_S_contig15909.4337.1 vs. uniprot
Match: A0A6U4XZ85_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4XZ85_HEMAN)

HSP 1 Score: 52.0 bits (123), Expect = 2.530e-6
Identity = 20/43 (46.51%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    7 QVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGVKEG 49
            + ++C+D    P P  + A R++ RRFDET++VEVE+V V+EG
Sbjct:  266 EADNCLDTNRVPSPTTFQAKRKLGRRFDETVLVEVEVVAVREG 308          
BLAST of mRNA_Ecto-sp13_S_contig15909.4337.1 vs. uniprot
Match: A0A8J2X2G1_9STRA (Peptidylprolyl isomerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2G1_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 3.250e-6
Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 0
Query:   11 CIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGVKEG 49
            CI+  L P+P  +GA RR+ARRFDE L+VEVE+V +++G
Sbjct:  236 CIEDVLLPQPRNFGAKRRLARRFDEGLLVEVEVVDLRKG 274          
BLAST of mRNA_Ecto-sp13_S_contig15909.4337.1 vs. uniprot
Match: A0A7S2BNB8_9STRA (Peptidylprolyl isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNB8_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 5.920e-6
Identity = 25/54 (46.30%), Postives = 32/54 (59.26%), Query Frame = 0
Query:    4 PPLQVED---CIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGVKEGNGRIF 54
            P  +V+D   C   T +P P  YGA RRM RR+DETLIV+ E+V +    G  F
Sbjct:  118 PTTKVQDNDACFSTTRQPTPSNYGAKRRMLRRYDETLIVDCEVVKINMSAGDGF 171          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15909.4337.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7G4V1_ECTSI5.720e-2495.83Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
A0A835YV71_9STRA3.420e-1378.05Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A4D9CY48_9STRA4.590e-866.67Peptidylprolyl isomerase n=1 Tax=Nannochloropsis s... [more]
I2CRD0_NANGC7.650e-866.67Peptidylprolyl isomerase n=1 Tax=Nannochloropsis g... [more]
A0A7S1SCJ5_ALECA3.210e-757.50Peptidylprolyl isomerase n=1 Tax=Alexandrium caten... [more]
B7G5J4_PHATC7.250e-750.00Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1E5E0_HEMAN1.820e-646.51Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A6U4XZ85_HEMAN2.530e-646.51Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A8J2X2G1_9STRA3.250e-656.41Peptidylprolyl isomerase n=1 Tax=Pelagomonas calce... [more]
A0A7S2BNB8_9STRA5.920e-646.30Peptidylprolyl isomerase n=1 Tax=Florenciella parv... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15909contigEcto-sp13_S_contig15909:149..313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15909.4337.1mRNA_Ecto-sp13_S_contig15909.4337.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15909 149..1283 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15909.4337.1 ID=prot_Ecto-sp13_S_contig15909.4337.1|Name=mRNA_Ecto-sp13_S_contig15909.4337.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=55bp
PPPPPLQVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGVKEGN
GRIF*
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