mRNA_Ecto-sp13_S_contig15902.4332.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: A0A6H5JHZ0_9PHAE (GT20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHZ0_9PHAE) HSP 1 Score: 468 bits (1205), Expect = 7.530e-164 Identity = 236/291 (81.10%), Postives = 240/291 (82.47%), Query Frame = 1
Query: 1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKIGFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVR 732
DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREE QLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKIGFFLHLPFPSSE GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNK+MLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRE M+LEAQVQGFVARVNSKLGSIDE GPVQFFLNVNP ++
Sbjct: 107 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREERQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKIGFFLHLPFPSSEIYRILPYREQILEGILSSDIVGFQTYDYARHFLSTVESLLDANCSPQGVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKSMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSREHMLLEAQVQGFVARVNSKLGSIDEVGPVQFFLNVNPELK 397
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: D7G2K2_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K2_ECTSI) HSP 1 Score: 462 bits (1189), Expect = 1.600e-152 Identity = 229/259 (88.42%), Postives = 233/259 (89.96%), Query Frame = 1
Query: 1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKIGFFLHLPFPSSEGVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVRGGVLIVVHAAVVRPL 777
DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPS GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPN + + V+ P+
Sbjct: 375 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPS---------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNELSALYAIADVLVITPI 618
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: A0A5D6YBX0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBX0_9STRA) HSP 1 Score: 225 bits (574), Expect = 1.090e-63 Identity = 129/318 (40.57%), Postives = 180/318 (56.60%), Query Frame = 1
Query: 1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSI----EEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKI--GFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTG--PHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVRGGVLIVV----HAAVVRPL 777
D E FY GFCKT++WPLFHS PTT+D ++ H+ D+ ++ + ++W AY A NQ+FAD +Q+VY +GDL+WV YHLT++PQM++N+ P+ I G+FLH+PFPSSE GVE+NGHFA VTICPVGID T L P V+ + ++Q K +LLGVD+LD TRGLV K LAVEE+F P L+ V F+Q+ TG P + + ++L AQV+ V+R+NS+L +I GPVQ+ LN+ + L+ + HA V P+
Sbjct: 402 DPKRERLFYHGFCKTVMWPLFHSWPPTTDDQLSTHEVDAAAGYGDDGFDMDKMWQAYVATNQAFADAVQEVYEEGDLVWVQGYHLTLVPQMVQNLFPNDNIDVGYFLHVPFPSSELFRIMTHREEVLTGMLGANLLGFQTYEYARHFQSAAVRLLGLESSHKGVEYNGHFARVTICPVGIDAAKYTALMRTPAVLEQVALMTQQFGRKKVLLGVDALDLTRGLVHKLLAVEELFTQHPALSQDVVFLQIV-TGAPPPTPDALLLGAQVESLVSRINSRLTAIGADGPVQY-LNLTKELSQEALVALYALAHALVTTPI 717
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: A0A8K1C3Y7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3Y7_PYTOL) HSP 1 Score: 223 bits (569), Expect = 4.520e-63 Identity = 126/303 (41.58%), Postives = 173/303 (57.10%), Query Frame = 1
Query: 1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREESQ-LWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKI--GFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVRGGVLIVVHA 759
D E FY+GFCKTILWPLFHSS PTTED + + D+ ++R + +W AY A NQSFAD +Q+VY +GDL+W+ YHL+++PQM+RN+ P++ I GFF+H PFPSSE GV+ +GHFA +TICPVGIDP+ T L V +++ Q KT++LG+D LD T+GLV K LAVEE+F ++P L+ +V FVQ+ TG S L AQV+ V+R+NSKL I PVQ+ +N + +LI ++A
Sbjct: 141 DPKREKLFYQGFCKTILWPLFHSSPPTTEDQLISQEMDNEADERNVMEKMWQAYVAVNQSFADAVQEVYEEGDLVWIQGYHLSLVPQMVRNLFPNSNIHIGFFMHTPFPSSELYRILNYREEMLTGVLGADLIGFQTYEYARHFQSSVVRLLGLESSHKGVDVDGHFARITICPVGIDPEKFTALARSDGVNDQIRQLRAQFAGKTVMLGMDQLDPTKGLVHKLLAVEELFTLRPELSREVVFVQIV-TGGTSALESPLGAQVEALVSRINSKLQDIGADAPVQY---LNQELPRDMLIALYA 439
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: A0A6A3MPS8_9STRA (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MPS8_9STRA) HSP 1 Score: 223 bits (569), Expect = 4.660e-63 Identity = 126/305 (41.31%), Postives = 171/305 (56.07%), Query Frame = 1
Query: 1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHD---ADSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKI--GFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVRGGVLIVVHA 759
D E +YEGFCKT++WPLFHS PTT+D I H+ E++R ++W AY AANQ+FAD +Q+VY +GDL+W+ YHLT++PQM++N+ P+ I GFF+H+PFPS+E GV+ NGHFA VTICPVGID D T + V M++ Q K ++LGVD LD T+GLV K LAVEE+F +P LA +V F+Q+ TG E LE+QV+ V+R+NSKL I GPVQ+ +N + LI ++A
Sbjct: 147 DERRERLYYEGFCKTVMWPLFHSCPPTTDDQIVQHEMTEGGGQEDERSMEKMWQAYVAANQAFADAVQEVYEEGDLVWIQGYHLTLVPQMVQNLFPNDNICLGFFMHIPFPSAELYRILNNREEILTGILGADLIGFQTYEYARHFQSACVRLLGLESSHKGVDFNGHFARVTICPVGIDADKYTAMVQSDAVQEQMKQLEGQFAGKQVILGVDQLDQTKGLVHKLLAVEELFTQKPELAKEVVFLQIV-TGASVLES-ALESQVESLVSRINSKLQDIGTEGPVQY---LNKEIAVEALIALYA 446
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: M4B3G5_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B3G5_HYAAE) HSP 1 Score: 223 bits (568), Expect = 5.930e-63 Identity = 124/286 (43.36%), Postives = 161/286 (56.29%), Query Frame = 1
Query: 1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDA--DSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKI--GFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQF 705
D E +Y+GFCKT+LWPLFHS PTT+D IA H+ D E+ ++W AY AANQ+FAD +Q+VY +GDL+W+ YHLT++PQM+RN+ P+ KI GFF+H+PFPS+E GV+ NGHFA V +CPVGID D T + V M+ Q K ++LGVD LD T+GLV K LAVEE+F QP LA V F+Q+ TG E LE+QV+ V+R+NSKL I GPVQ+
Sbjct: 144 DEKREKLYYQGFCKTVLWPLFHSCPPTTDDQIAQHEMMEDGQEDDWSMEKMWQAYVAANQAFADAVQEVYEEGDLVWIQGYHLTLVPQMVRNLFPNDKICLGFFMHVPFPSAELYRILNNREEILAGMLAADLIGFQTSEYARHFQSACVRILGLESSHKGVDFNGHFARVVVCPVGIDVDKYTAMMQSEAVQEQMKLLKSQFSGKKVILGVDQLDQTKGLVHKLLAVEELFIQQPALAKNVVFLQIV-TGATVFES-ALESQVESLVSRINSKLQDIGTEGPVQY 427
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: A0A3M6VHA7_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHA7_9STRA) HSP 1 Score: 223 bits (567), Expect = 8.480e-63 Identity = 123/304 (40.46%), Postives = 172/304 (56.58%), Query Frame = 1
Query: 1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDA--DSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKI--GFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVRGGVLIVVHA 759
D E +Y+GFCKT++WPLFHS PTT+D I H+ D E+ ++W AY AANQ+FAD IQ+VY +GDL+W+ YHLT++PQM++N+ P+ + GFF+H+PFPS+E GV+ NGHFA VTICPVGID + + V + M + + Q K ++LGVD LD T+GLV K LAVEE+F +P LA KV F+Q+ TGP E LE+QV+ V+R+NSKL + GPVQ+ +N ++ L+ ++A
Sbjct: 143 DERRERLYYQGFCKTVMWPLFHSCPPTTDDQITQHEMMEDGQEDDHSMEKMWQAYVAANQAFADAIQEVYEEGDLVWIQGYHLTLVPQMVQNLFPNNNVCMGFFMHIPFPSAELYRILNNREEILTGILGADLIGFQTYEYARHFQSACVRLLGLESSHEGVDLNGHFARVTICPVGIDANKYAAMVQSDAVQKQMTQLTSQFSGKKVILGVDQLDQTKGLVHKLLAVEELFTQKPDLAKKVVFLQIV-TGPPVYES-ALESQVESLVSRINSKLQDVGTEGPVQY---LNKDIAVEALLALYA 441
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: H3GTK8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTK8_PHYRM) HSP 1 Score: 222 bits (566), Expect = 1.030e-62 Identity = 125/304 (41.12%), Postives = 172/304 (56.58%), Query Frame = 1
Query: 1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDA--DSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKI--GFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVRGGVLIVVHA 759
D E +Y+GFCKT++WPLFHS PTT+D I H+ E++R ++W AY AANQ+FAD +Q+VY +GDL+WV YHLT++PQM++N+ P+ + GFF+H+PFPS+E GV+ NGHFA VTICPVGID D + V M++ Q K ++LGVD LD T+GLV K LAVEE+F ++P LA +V F+Q+ TG E VLE+QV+ V+R+NSKL I GPVQ+ +N + LI ++A
Sbjct: 137 DEKREKLYYQGFCKTVMWPLFHSCPPTTDDQIIQHEMMEGGQEDERSMEKMWQAYVAANQAFADAVQEVYEEGDLVWVQGYHLTLVPQMVQNLFPNDNVCLGFFMHIPFPSAELYRILNNREEILTGILGADLIGFQTYEYARHFQSACVRLLGLESSHKGVDFNGHFARVTICPVGIDADKYIAMVQSDPVQEQMRQLESQFAGKKVILGVDQLDQTKGLVHKLLAVEELFTVKPELAKEVVFLQIV-TGTTVFES-VLESQVESLVSRINSKLQDIGTEGPVQY---LNKEIAVEALIALYA 435
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: A0A662XC19_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XC19_9STRA) HSP 1 Score: 221 bits (563), Expect = 3.200e-62 Identity = 124/304 (40.79%), Postives = 170/304 (55.92%), Query Frame = 1
Query: 1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDA--DSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKI--GFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVRGGVLIVVHA 759
DA E FYEGFCKT++WPLFHS PTT+D I H+ E++R ++W AY A NQ+FAD +Q+VY +GDL+WV YHLT++PQM++N+ P+ I GFF+H+PFPS+E GV+ NGHFA V+ICPVGID D L V M++ + Q K ++LGVD LD T+GLV K LA+EE+F +P LA +V F+Q+ P E L +QV+ V+R+NSKL I GPVQ+ +N ++ LI ++A
Sbjct: 280 DAKRERLFYEGFCKTVMWPLFHSWPPTTDDQIIAHEMMEGGQEDERSMEKMWQAYVATNQAFADAVQEVYEEGDLVWVQGYHLTLVPQMVQNLFPNDNICLGFFIHIPFPSAELYRILNNREEILTGMLGADLIGFQTYEYARHFQSACVRLLGLESSHKGVDFNGHFARVSICPVGIDADKYIALVQSDPVQEQMKQLTSQFAGKHVILGVDQLDLTKGLVHKLLAIEELFTRKPELAKEVMFLQIVAGTPAVLES-ALGSQVESLVSRINSKLQDIGTDGPVQY---LNKDIAVETLIALYA 579
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: A0A836CRD5_9STRA (Glycosyltransferase family 20-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRD5_9STRA) HSP 1 Score: 221 bits (562), Expect = 4.580e-62 Identity = 125/272 (45.96%), Postives = 155/272 (56.99%), Query Frame = 1
Query: 154 AYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQML----------------RNVLPSAKIGFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQR----------------WSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTG-PHSR---ERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVN 720
AYKA NQ FAD IQ++YRDGD++WVHDYHL +LPQML R +LPSAKI FFLH+PFPSSE GVE+NGHFA+ ICPVGIDP+ QL +P+V + QR W++Q + +LLGVD LDAT+GLV KFLAVEEMF+ +P LA+ V+F+QVC G HSR +R VL AQ+ GFV R+NSKL ++DE GPV+FFL+VN
Sbjct: 503 AYKAVNQQFADAIQEIYRDGDMVWVHDYHLMLLPQMLTIXXXXXXXXXXXXXXRALLPSAKISFFLHVPFPSSEIYRILPNREQILEGLLGSDLLGFQTYDYARHFLSTVESLLDADCSRQGVEYNGHFASAAICPVGIDPEQWVQLARRPEVESVRQRSACKLSXXXXXXXXXXWARQLDGRRVLLGVDGLDATKGLVHKFLAVEEMFDREPRLAESVSFIQVCMGGGAHSRVAGDRQVLAAQIHGFVGRINSKLANLDEEGPVKFFLDVN 774 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15902.4332.1 >prot_Ecto-sp13_S_contig15902.4332.1 ID=prot_Ecto-sp13_S_contig15902.4332.1|Name=mRNA_Ecto-sp13_S_contig15902.4332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=256bp MEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREESQLWLAYback to top mRNA from alignment at Ecto-sp13_S_contig15902:430..3542- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15902.4332.1 ID=mRNA_Ecto-sp13_S_contig15902.4332.1|Name=mRNA_Ecto-sp13_S_contig15902.4332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3113bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15902:430..3542- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15902:430..3542- >mRNA_Ecto-sp13_S_contig15902.4332.1 ID=mRNA_Ecto-sp13_S_contig15902.4332.1|Name=mRNA_Ecto-sp13_S_contig15902.4332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=768bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15902:430..3542- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |