mRNA_Ecto-sp13_S_contig15902.4332.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15902.4332.1
Unique NamemRNA_Ecto-sp13_S_contig15902.4332.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: A0A6H5JHZ0_9PHAE (GT20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHZ0_9PHAE)

HSP 1 Score: 468 bits (1205), Expect = 7.530e-164
Identity = 236/291 (81.10%), Postives = 240/291 (82.47%), Query Frame = 1
Query:    1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKIGFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVR 732
            DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREE QLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKIGFFLHLPFPSSE                                               GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNK+MLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRE M+LEAQVQGFVARVNSKLGSIDE GPVQFFLNVNP ++
Sbjct:  107 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREERQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKIGFFLHLPFPSSEIYRILPYREQILEGILSSDIVGFQTYDYARHFLSTVESLLDANCSPQGVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKSMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSREHMLLEAQVQGFVARVNSKLGSIDEVGPVQFFLNVNPELK 397          
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: D7G2K2_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K2_ECTSI)

HSP 1 Score: 462 bits (1189), Expect = 1.600e-152
Identity = 229/259 (88.42%), Postives = 233/259 (89.96%), Query Frame = 1
Query:    1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKIGFFLHLPFPSSEGVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVRGGVLIVVHAAVVRPL 777
            DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPS               GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPN    +  +    V+ P+
Sbjct:  375 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPS---------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNELSALYAIADVLVITPI 618          
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: A0A5D6YBX0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBX0_9STRA)

HSP 1 Score: 225 bits (574), Expect = 1.090e-63
Identity = 129/318 (40.57%), Postives = 180/318 (56.60%), Query Frame = 1
Query:    1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSI----EEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKI--GFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTG--PHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVRGGVLIVV----HAAVVRPL 777
            D   E  FY GFCKT++WPLFHS  PTT+D ++ H+ D+     ++  +  ++W AY A NQ+FAD +Q+VY +GDL+WV  YHLT++PQM++N+ P+  I  G+FLH+PFPSSE                                               GVE+NGHFA VTICPVGID    T L   P V+  +   ++Q   K +LLGVD+LD TRGLV K LAVEE+F   P L+  V F+Q+  TG  P + + ++L AQV+  V+R+NS+L +I   GPVQ+ LN+   +    L+ +    HA V  P+
Sbjct:  402 DPKRERLFYHGFCKTVMWPLFHSWPPTTDDQLSTHEVDAAAGYGDDGFDMDKMWQAYVATNQAFADAVQEVYEEGDLVWVQGYHLTLVPQMVQNLFPNDNIDVGYFLHVPFPSSELFRIMTHREEVLTGMLGANLLGFQTYEYARHFQSAAVRLLGLESSHKGVEYNGHFARVTICPVGIDAAKYTALMRTPAVLEQVALMTQQFGRKKVLLGVDALDLTRGLVHKLLAVEELFTQHPALSQDVVFLQIV-TGAPPPTPDALLLGAQVESLVSRINSRLTAIGADGPVQY-LNLTKELSQEALVALYALAHALVTTPI 717          
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: A0A8K1C3Y7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3Y7_PYTOL)

HSP 1 Score: 223 bits (569), Expect = 4.520e-63
Identity = 126/303 (41.58%), Postives = 173/303 (57.10%), Query Frame = 1
Query:    1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREESQ-LWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKI--GFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVRGGVLIVVHA 759
            D   E  FY+GFCKTILWPLFHSS PTTED +   + D+  ++R   + +W AY A NQSFAD +Q+VY +GDL+W+  YHL+++PQM+RN+ P++ I  GFF+H PFPSSE                                               GV+ +GHFA +TICPVGIDP+  T L     V   +++   Q   KT++LG+D LD T+GLV K LAVEE+F ++P L+ +V FVQ+  TG  S     L AQV+  V+R+NSKL  I    PVQ+   +N  +   +LI ++A
Sbjct:  141 DPKREKLFYQGFCKTILWPLFHSSPPTTEDQLISQEMDNEADERNVMEKMWQAYVAVNQSFADAVQEVYEEGDLVWIQGYHLSLVPQMVRNLFPNSNIHIGFFMHTPFPSSELYRILNYREEMLTGVLGADLIGFQTYEYARHFQSSVVRLLGLESSHKGVDVDGHFARITICPVGIDPEKFTALARSDGVNDQIRQLRAQFAGKTVMLGMDQLDPTKGLVHKLLAVEELFTLRPELSREVVFVQIV-TGGTSALESPLGAQVEALVSRINSKLQDIGADAPVQY---LNQELPRDMLIALYA 439          
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: A0A6A3MPS8_9STRA (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MPS8_9STRA)

HSP 1 Score: 223 bits (569), Expect = 4.660e-63
Identity = 126/305 (41.31%), Postives = 171/305 (56.07%), Query Frame = 1
Query:    1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHD---ADSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKI--GFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVRGGVLIVVHA 759
            D   E  +YEGFCKT++WPLFHS  PTT+D I  H+       E++R   ++W AY AANQ+FAD +Q+VY +GDL+W+  YHLT++PQM++N+ P+  I  GFF+H+PFPS+E                                               GV+ NGHFA VTICPVGID D  T +     V   M++   Q   K ++LGVD LD T+GLV K LAVEE+F  +P LA +V F+Q+  TG    E   LE+QV+  V+R+NSKL  I   GPVQ+   +N  +    LI ++A
Sbjct:  147 DERRERLYYEGFCKTVMWPLFHSCPPTTDDQIVQHEMTEGGGQEDERSMEKMWQAYVAANQAFADAVQEVYEEGDLVWIQGYHLTLVPQMVQNLFPNDNICLGFFMHIPFPSAELYRILNNREEILTGILGADLIGFQTYEYARHFQSACVRLLGLESSHKGVDFNGHFARVTICPVGIDADKYTAMVQSDAVQEQMKQLEGQFAGKQVILGVDQLDQTKGLVHKLLAVEELFTQKPELAKEVVFLQIV-TGASVLES-ALESQVESLVSRINSKLQDIGTEGPVQY---LNKEIAVEALIALYA 446          
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: M4B3G5_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B3G5_HYAAE)

HSP 1 Score: 223 bits (568), Expect = 5.930e-63
Identity = 124/286 (43.36%), Postives = 161/286 (56.29%), Query Frame = 1
Query:    1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDA--DSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKI--GFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQF 705
            D   E  +Y+GFCKT+LWPLFHS  PTT+D IA H+   D  E+     ++W AY AANQ+FAD +Q+VY +GDL+W+  YHLT++PQM+RN+ P+ KI  GFF+H+PFPS+E                                               GV+ NGHFA V +CPVGID D  T +     V   M+    Q   K ++LGVD LD T+GLV K LAVEE+F  QP LA  V F+Q+  TG    E   LE+QV+  V+R+NSKL  I   GPVQ+
Sbjct:  144 DEKREKLYYQGFCKTVLWPLFHSCPPTTDDQIAQHEMMEDGQEDDWSMEKMWQAYVAANQAFADAVQEVYEEGDLVWIQGYHLTLVPQMVRNLFPNDKICLGFFMHVPFPSAELYRILNNREEILAGMLAADLIGFQTSEYARHFQSACVRILGLESSHKGVDFNGHFARVVVCPVGIDVDKYTAMMQSEAVQEQMKLLKSQFSGKKVILGVDQLDQTKGLVHKLLAVEELFIQQPALAKNVVFLQIV-TGATVFES-ALESQVESLVSRINSKLQDIGTEGPVQY 427          
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: A0A3M6VHA7_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHA7_9STRA)

HSP 1 Score: 223 bits (567), Expect = 8.480e-63
Identity = 123/304 (40.46%), Postives = 172/304 (56.58%), Query Frame = 1
Query:    1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDA--DSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKI--GFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVRGGVLIVVHA 759
            D   E  +Y+GFCKT++WPLFHS  PTT+D I  H+   D  E+     ++W AY AANQ+FAD IQ+VY +GDL+W+  YHLT++PQM++N+ P+  +  GFF+H+PFPS+E                                               GV+ NGHFA VTICPVGID +    +     V + M + + Q   K ++LGVD LD T+GLV K LAVEE+F  +P LA KV F+Q+  TGP   E   LE+QV+  V+R+NSKL  +   GPVQ+   +N ++    L+ ++A
Sbjct:  143 DERRERLYYQGFCKTVMWPLFHSCPPTTDDQITQHEMMEDGQEDDHSMEKMWQAYVAANQAFADAIQEVYEEGDLVWIQGYHLTLVPQMVQNLFPNNNVCMGFFMHIPFPSAELYRILNNREEILTGILGADLIGFQTYEYARHFQSACVRLLGLESSHEGVDLNGHFARVTICPVGIDANKYAAMVQSDAVQKQMTQLTSQFSGKKVILGVDQLDQTKGLVHKLLAVEELFTQKPDLAKKVVFLQIV-TGPPVYES-ALESQVESLVSRINSKLQDVGTEGPVQY---LNKDIAVEALLALYA 441          
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: H3GTK8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTK8_PHYRM)

HSP 1 Score: 222 bits (566), Expect = 1.030e-62
Identity = 125/304 (41.12%), Postives = 172/304 (56.58%), Query Frame = 1
Query:    1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDA--DSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKI--GFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVRGGVLIVVHA 759
            D   E  +Y+GFCKT++WPLFHS  PTT+D I  H+      E++R   ++W AY AANQ+FAD +Q+VY +GDL+WV  YHLT++PQM++N+ P+  +  GFF+H+PFPS+E                                               GV+ NGHFA VTICPVGID D    +     V   M++   Q   K ++LGVD LD T+GLV K LAVEE+F ++P LA +V F+Q+  TG    E  VLE+QV+  V+R+NSKL  I   GPVQ+   +N  +    LI ++A
Sbjct:  137 DEKREKLYYQGFCKTVMWPLFHSCPPTTDDQIIQHEMMEGGQEDERSMEKMWQAYVAANQAFADAVQEVYEEGDLVWVQGYHLTLVPQMVQNLFPNDNVCLGFFMHIPFPSAELYRILNNREEILTGILGADLIGFQTYEYARHFQSACVRLLGLESSHKGVDFNGHFARVTICPVGIDADKYIAMVQSDPVQEQMRQLESQFAGKKVILGVDQLDQTKGLVHKLLAVEELFTVKPELAKEVVFLQIV-TGTTVFES-VLESQVESLVSRINSKLQDIGTEGPVQY---LNKEIAVEALIALYA 435          
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: A0A662XC19_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XC19_9STRA)

HSP 1 Score: 221 bits (563), Expect = 3.200e-62
Identity = 124/304 (40.79%), Postives = 170/304 (55.92%), Query Frame = 1
Query:    1 DAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDA--DSIEEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKI--GFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVRGGVLIVVHA 759
            DA  E  FYEGFCKT++WPLFHS  PTT+D I  H+      E++R   ++W AY A NQ+FAD +Q+VY +GDL+WV  YHLT++PQM++N+ P+  I  GFF+H+PFPS+E                                               GV+ NGHFA V+ICPVGID D    L     V   M++ + Q   K ++LGVD LD T+GLV K LA+EE+F  +P LA +V F+Q+    P   E   L +QV+  V+R+NSKL  I   GPVQ+   +N ++    LI ++A
Sbjct:  280 DAKRERLFYEGFCKTVMWPLFHSWPPTTDDQIIAHEMMEGGQEDERSMEKMWQAYVATNQAFADAVQEVYEEGDLVWVQGYHLTLVPQMVQNLFPNDNICLGFFIHIPFPSAELYRILNNREEILTGMLGADLIGFQTYEYARHFQSACVRLLGLESSHKGVDFNGHFARVSICPVGIDADKYIALVQSDPVQEQMKQLTSQFAGKHVILGVDQLDLTKGLVHKLLAIEELFTRKPELAKEVMFLQIVAGTPAVLES-ALGSQVESLVSRINSKLQDIGTDGPVQY---LNKDIAVETLIALYA 579          
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Match: A0A836CRD5_9STRA (Glycosyltransferase family 20-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRD5_9STRA)

HSP 1 Score: 221 bits (562), Expect = 4.580e-62
Identity = 125/272 (45.96%), Postives = 155/272 (56.99%), Query Frame = 1
Query:  154 AYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQML----------------RNVLPSAKIGFFLHLPFPSSE-----------------------------------------------GVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQR----------------WSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTG-PHSR---ERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVN 720
            AYKA NQ FAD IQ++YRDGD++WVHDYHL +LPQML                R +LPSAKI FFLH+PFPSSE                                               GVE+NGHFA+  ICPVGIDP+   QL  +P+V  + QR                W++Q   + +LLGVD LDAT+GLV KFLAVEEMF+ +P LA+ V+F+QVC  G  HSR   +R VL AQ+ GFV R+NSKL ++DE GPV+FFL+VN
Sbjct:  503 AYKAVNQQFADAIQEIYRDGDMVWVHDYHLMLLPQMLTIXXXXXXXXXXXXXXRALLPSAKISFFLHVPFPSSEIYRILPNREQILEGLLGSDLLGFQTYDYARHFLSTVESLLDADCSRQGVEYNGHFASAAICPVGIDPEQWVQLARRPEVESVRQRSACKLSXXXXXXXXXXWARQLDGRRVLLGVDGLDATKGLVHKFLAVEEMFDREPRLAESVSFIQVCMGGGAHSRVAGDRQVLAAQIHGFVGRINSKLANLDEEGPVKFFLDVN 774          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15902.4332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHZ0_9PHAE7.530e-16481.10GT20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2K2_ECTSI1.600e-15288.42Trehalose 6-phosphate synthase, family GT20 / Treh... [more]
A0A5D6YBX0_9STRA1.090e-6340.57Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1C3Y7_PYTOL4.520e-6341.58Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3MPS8_9STRA4.660e-6341.31Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
M4B3G5_HYAAE5.930e-6343.36Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A3M6VHA7_9STRA8.480e-6340.46Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
H3GTK8_PHYRM1.030e-6241.12Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A662XC19_9STRA3.200e-6240.79Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A836CRD5_9STRA4.580e-6245.96Glycosyltransferase family 20-domain-containing pr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15902contigEcto-sp13_S_contig15902:430..3542 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score227.3
Seed ortholog evalue8.4e-57
Seed eggNOG ortholog272952.HpaP800814
Model size777
KEGG rclassRC00005,RC00017,RC00049,RC02748
KEGG koko:K16055
KEGG ReactionR02737,R02778
KEGG Pathwayko00500,ko01100,map00500,map01100
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.Trehalose-phosphatase
EggNOG OGs3QCMS@4776,COG1877@1,KOG1050@2759
EC2.4.1.15,3.1.3.12
Cds size768
COG Functional cat.G
CAZyGT20
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15902.4332.1prot_Ecto-sp13_S_contig15902.4332.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15902 430..3533 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462840.1866531-CDS-Ecto-sp13_S_contig15902:429..6211681462840.1866531-CDS-Ecto-sp13_S_contig15902:429..621Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15902 430..621 -
1681462840.199783-CDS-Ecto-sp13_S_contig15902:946..10721681462840.199783-CDS-Ecto-sp13_S_contig15902:946..1072Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15902 947..1072 -
1681462840.209077-CDS-Ecto-sp13_S_contig15902:1478..16101681462840.209077-CDS-Ecto-sp13_S_contig15902:1478..1610Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15902 1479..1610 -
1681462840.2181904-CDS-Ecto-sp13_S_contig15902:2945..31101681462840.2181904-CDS-Ecto-sp13_S_contig15902:2945..3110Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15902 2946..3110 -
1681462840.2279058-CDS-Ecto-sp13_S_contig15902:3380..35331681462840.2279058-CDS-Ecto-sp13_S_contig15902:3380..3533Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15902 3381..3533 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462840.2384586-UTR-Ecto-sp13_S_contig15902:3533..35421681462840.2384586-UTR-Ecto-sp13_S_contig15902:3533..3542Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15902 3534..3542 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15902.4332.1

>prot_Ecto-sp13_S_contig15902.4332.1 ID=prot_Ecto-sp13_S_contig15902.4332.1|Name=mRNA_Ecto-sp13_S_contig15902.4332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=256bp
MEDRFYEGFCKTILWPLFHSSMPTTEDTIACHDADSIEEQREESQLWLAY
KAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKIGFFLHL
PFPSSEGVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTR
NKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHS
RERMVLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNVRGGVLIVVHA
AVVRPL
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mRNA from alignment at Ecto-sp13_S_contig15902:430..3542-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15902.4332.1 ID=mRNA_Ecto-sp13_S_contig15902.4332.1|Name=mRNA_Ecto-sp13_S_contig15902.4332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3113bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15902:430..3542- (Ectocarpus species13 EcNAP12_S_4_19m)
GATGCCGCGATGGAGGACAGGTTCTACGAGGGTTTCTGCAAGACGATCCT TTGGCCGCTCTTCCACTCGTCGATGCCCACGACGGAAGACACCATCGCCT GCCACGACGCCGACTCGATCGAGGAACAGCGGGAGGAGAGCCAGCTGTGG TTGGCTTACAAGGTTTGTGTGTGGTGGCGGTTTTTGTGCTCTGTGTTTCT TAGGTGGAAAAGTCCAAGGGATAAGGGAGGGCCTTCGGTGTCGGTGGGCG AGTTCATGGGGATCACGCACGCCGTCTGCGTGTTCCCCTTCTGGGGTCCC CCCCCCCTGTGTCTCTCTCCACTTTCTTTTGTTTTTTTTGCCGTCTTTTC GTCAGGCGGCAAACGAGAGCTCAACGAGATTCCATCTCGACTGTGCCTTA ATGCATTATTTTTTTTTTTCGCCTTTCGTTAGGCGGCGAACCAGAGCTTT GCGGACACGATCCAGGACGTCTACAGGGACGGCGACCTCATCTGGGTGCA CGACTACCACCTCACCATGCTGCCGCAAATGCTGAGGAACGTATTGCCCT CGGCCAAAATCGGCTTCTTTTTGCACCTTCCCTTCCCCTCGTCCGAGGTA AAACGGTGTTTTGTCTTGTTTTTGCCTATTTTTTTTGTTTTTTTCGGGGA GCTTTTCTGCTGAGTCTTTGCTGTTCCTGAGTAGTTTGATTCTACCCTCA GCGGGTGGGATGGATTACATTTAGATCGTCGGACATGGTAAACACTCCGC TCGCCCACTCCCTGTTCGTTTTTTTCCCCTGCGATGTTTTTCGTTGCCAT CAACACGACCCGACCCCATGGCTGTGAACGGAATTCGAACGGCCCAATGA GATACATATCCCCTTGCCTTTCAACCCCGTCTGCCCCTCTCCCCACCTCC GCATCATCGATGCCCCTTTCTTTTTTTTGTTTGTGCCCCGTTTGCTTTCT TCACAACCCGACGGACGGAAGATCTACCGCATTTTGCCGTACCGCGAACA AATCCTGGAGGGAATCCTCAGCTCCGACATCGTCGGCTTCCAGACGTACG ACTATGCGAGGCACTTCCTGTCAACGGTGGAGAGCCTGCTCGACGCTAAC TGCTCCCCTCAGGTGGGGGCGCCGCCGTTAGTTGGTTGTGTACATGTATG GTGTGTGTGTGTGTGTGTGTTTCGTGTATACTGTACTACCGGCTGTGCGC GGCTATTGCACAGTATACGACTCAAGATAACACACTCCCTGGACCGATTT TCAAAGCTCGACTTTTTCAACAGCAGAAAGGGTCGCAACGCCGAAAACGT AGCCTTCGTTGTTGCATCTCTTCGTCGTGGAGTAGTCGAGTGTGGAAAAT CAGTCCAGGGGGTGTGTTATCTTGTGTCGTACGAGGTATCTGTTTACTCG ATGTTGCGTTCGGTGTGTAATTTTTCGCAGCCTTGTATCTACTGTCGTAC CTCGCTAAAGGACACCAAAATCACGGAAACTTCCCGCGGTTAAGGCACAC TTTTTTTCCGAGCATGGTTGCTCGCAGAATGAACATTAGGAGGGGTATCA ACCTTACGGGCACTTCCTCGGCTTCAGGACACTTTTTTTTGCGCAACAAC TCAACCGAGGTCCGACTGTTATGTACTCGATGTTGGACGGTGTGTGTTTT CGTGTGTGATATACGCAGCCATTGTATCACGCAAGCTCGCATGTCGTGTA TGGCGAATTTTTTTCGTGTACTGCTAGCTGTACGCAGCGCAGTTGCATCT GTTGTACTCGAAGCGAGGCTCGTCTGAGCGGTCCGCTCTTTCTGTTTTGT TTTTTTCGTTTTGTTTTGCCTTGCTGCTGCTTCTTCTGCTGCTGCTTGTT ATGACGTTGTTGTTGTGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT GCTGTTGCTGTTGCTGCTGCTGCTGGTACAAGGGGGTGGAGCACAACGGG CACTTCGCGAACGTGACGATCTGTCCGGTTGGCATCGACCCGGATGCGGT GACGCAGCTATGCCACCAGCCGGACGTGATGAGGCTCATGCAGCGGTGGT CCAAGCAGACGAGGGTGAGAGAGATAGAAAAGGGAGAGGGAGAAACAGAC AGACAGACAGATGGACAGACAAGACAGACAGACGGAGAGGTAGAAGGGGG GCAGAGGAAGCAACGAAGGGATTGATTTCCCACACAGAAGCGACTTTCAG GCCGGTAGCAATTTTTTTCCGAGTCGGGGGCGTGCGCTCGACCGAAAGTA CGGTGCGTCTATTCCGCAAGCTATCGTGCGACTGCTACCTTCAAGTAAAT TTTCTCATCTTTCTCGCACATTTCGTCCCTGTTTTTTTTTTTTCGTGCCT TTTTTTTTCTCGTGCATGATTTTTTTTCATGCTTGTTTTTTTAGGGTTGC ATGTCCCTCTTCTGTTTTTTTGCTCATGCATGATTTCTTCTTGTGTGTCA TTTTCATGCATATCATTCAGAACAAGACGATGCTTCTCGGAGTGGACAGC CTGGACGCTACCCGTGGTCTGGTGCAGAAGTTTCTCGCCGTGGAGGAGAT GTTCGAGATGCAGCCGGGCCTCGCGGACAAGGTCAACTTCGTGCAGGTGC GATCGCCGCGCCGATCCGCCAACCACTGGTTGTTTGGTGTTACCATGTAC TTTTCAAGTGAAATAAAGAAAAAGTTGGGAGGGGGTGTGAATTGGCATGT ACGTGCGTGATTATGCTATTTTCGTTTAACAGTCTATCGGACAATGTAAT ACAACTTGAAGTATGTGGGAGGACAAGTGGACGGTCTCTTTGTGTGTGTG TGTTTTTAGCCTGTGGACGAAACTAAAAGTATATGAAAACCGTTGGGAGC ATTGAATGAATGGCACAGAGTACTGGTAAAATATTACAGCTGGGAGGATT TATTTGCCTGACGACCGGCAGGTTTGCTTTACGGGGCCGCACTCCCGAGA GCGCATGGTGCTGGAGGCGCAGGTGCAGGGCTTCGTGGCAAGGGTCAACT CCAAGCTGGGGAGTATCGACGAGGCCGGGCCGGTGCAGTTCTTCCTGAAC GTCAACCCCAACGTAAGAGGGGGTGTACTCATAGTCGTGCATGCCGCAGT CGTTAGACCATTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15902:430..3542-

>mRNA_Ecto-sp13_S_contig15902.4332.1 ID=mRNA_Ecto-sp13_S_contig15902.4332.1|Name=mRNA_Ecto-sp13_S_contig15902.4332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=768bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15902:430..3542- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGGACAGGTTCTACGAGGGTTTCTGCAAGACGATCCTTTGGCCGCT
CTTCCACTCGTCGATGCCCACGACGGAAGACACCATCGCCTGCCACGACG
CCGACTCGATCGAGGAACAGCGGGAGGAGAGCCAGCTGTGGTTGGCTTAC
AAGGCGGCGAACCAGAGCTTTGCGGACACGATCCAGGACGTCTACAGGGA
CGGCGACCTCATCTGGGTGCACGACTACCACCTCACCATGCTGCCGCAAA
TGCTGAGGAACGTATTGCCCTCGGCCAAAATCGGCTTCTTTTTGCACCTT
CCCTTCCCCTCGTCCGAGGGGGTGGAGCACAACGGGCACTTCGCGAACGT
GACGATCTGTCCGGTTGGCATCGACCCGGATGCGGTGACGCAGCTATGCC
ACCAGCCGGACGTGATGAGGCTCATGCAGCGGTGGTCCAAGCAGACGAGG
AACAAGACGATGCTTCTCGGAGTGGACAGCCTGGACGCTACCCGTGGTCT
GGTGCAGAAGTTTCTCGCCGTGGAGGAGATGTTCGAGATGCAGCCGGGCC
TCGCGGACAAGGTCAACTTCGTGCAGGTTTGCTTTACGGGGCCGCACTCC
CGAGAGCGCATGGTGCTGGAGGCGCAGGTGCAGGGCTTCGTGGCAAGGGT
CAACTCCAAGCTGGGGAGTATCGACGAGGCCGGGCCGGTGCAGTTCTTCC
TGAACGTCAACCCCAACGTAAGAGGGGGTGTACTCATAGTCGTGCATGCC
GCAGTCGTTAGACCATTG
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