prot_Ecto-sp13_S_contig15871.4313.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig15871.4313.1
Unique Name	prot_Ecto-sp13_S_contig15871.4313.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	114

Homology

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BLAST of mRNA_Ecto-sp13_S_contig15871.4313.1 vs. uniprot
Match: A0A6H5KMW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW5_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 4.830e-67
Identity = 110/113 (97.35%), Postives = 110/113 (97.35%), Query Frame = 0

Query:    1 MGGVSESGLRVVPGAGETDASIGSGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWMDVDIPFSTLK 113
            MGGVSESGLRVVPGAGETDA   SGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWMDVDIPFSTLK
Sbjct:  315 MGGVSESGLRVVPGAGETDAKSSSGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWMDVDIPFSTLK 427

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BLAST of mRNA_Ecto-sp13_S_contig15871.4313.1 vs. uniprot
Match: D8LL63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL63_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 6.320e-66
Identity = 106/113 (93.81%), Postives = 108/113 (95.58%), Query Frame = 0

Query:    1 MGGVSESGLRVVPGAGETDASIGSGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWMDVDIPFSTLK 113
            MGGVSESGL VVPGAGETD S  SGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLS YDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEW+DVDIPF+TLK
Sbjct:  132 MGGVSESGLGVVPGAGETDVSSSSGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSEYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWIDVDIPFTTLK 244

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BLAST of mRNA_Ecto-sp13_S_contig15871.4313.1 vs. uniprot
Match: A0A0G4FWF9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FWF9_VITBC)

HSP 1 Score: 134 bits (338), Expect = 6.080e-35
Identity = 69/112 (61.61%), Postives = 84/112 (75.00%), Query Frame = 0

Query:    1 MGGVSESGLRVVPGAGE--TDASIGSGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWMDVDIPFS 110
            MGGVSES +++ PGA E  T A++       AAVFSGEVKT+N GGFVS+RTR   PPLDLSAY+ LRLR+KGDG+RYK  I D+ GW+S +W   FDTVK EW+ VD+PFS
Sbjct:  188 MGGVSESNIKLEPGAAEPNTGATV-------AAVFSGEVKTANFGGFVSVRTRKFDPPLDLSAYEGLRLRIKGDGSRYKMQIRDNAGWDSPSWGMGFDTVKDEWVTVDLPFS 292

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BLAST of mRNA_Ecto-sp13_S_contig15871.4313.1 vs. uniprot
Match: A0A835ZH41_9STRA (Complex I intermediate-associated protein 30-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH41_9STRA)

HSP 1 Score: 130 bits (328), Expect = 7.930e-34
Identity = 66/112 (58.93%), Postives = 79/112 (70.54%), Query Frame = 0

Query:    1 MGGVSESGLRVVPGAGETDASIGSGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWMDVDIPFSTL 112
            MGGVS S L VVPG GE       G  ++AAVF G V  +N+GGF S+R+RNASPP D S +DALRLRVKGDG RYKF++YD+ GW+  +W  +FDT  GEW DV  PFS L
Sbjct:  239 MGGVSTSELVVVPGEGEA------GGRSSAAVFRGTVSPANNGGFASVRSRNASPPWDWSQFDALRLRVKGDGFRYKFTVYDAAGWDRPSWSYSFDTAAGEWADVTFPFSAL 344

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BLAST of mRNA_Ecto-sp13_S_contig15871.4313.1 vs. uniprot
Match: A0A7S2UWN3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN3_9STRA)

HSP 1 Score: 129 bits (323), Expect = 7.440e-33
Identity = 64/111 (57.66%), Postives = 79/111 (71.17%), Query Frame = 0

Query:    1 MGGVSESGLRVVPGAGE--TDASIGSGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWMDVDIPF 109
            MGG+S+S L VVPGAGE  T + I       AAVFSGEV T N+GGF S+RTRN  PPLDLS++D + +R+KGDGNRYK  + D   W+  +WC +FDT  G+WMDV IPF
Sbjct:  190 MGGISKSSLSVVPGAGEEATGSRI-------AAVFSGEVSTDNNGGFASVRTRNLDPPLDLSSFDGIEMRLKGDGNRYKLMLRDETRWDGISWCYSFDTEAGKWMDVRIPF 293

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BLAST of mRNA_Ecto-sp13_S_contig15871.4313.1 vs. uniprot
Match: A0A7S4DIU2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIU2_HETAK)

HSP 1 Score: 122 bits (305), Expect = 5.700e-32
Identity = 66/110 (60.00%), Postives = 79/110 (71.82%), Query Frame = 0

Query:    1 MGGVSESGLRVVPGAGE--TDASIGSGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWMDVDIP 108
            MGGVSES L++VPGA E  T A +       AAVFSG VKT+N+GGF S+RTRN +P L+LS    LRLRVKGDGNRYKF + D PGW+S  +  +FDTV GEW+ VD P
Sbjct:   96 MGGVSESSLQLVPGAAEEPTGARL-------AAVFSGVVKTANNGGFASVRTRNFTPRLNLSGAQGLRLRVKGDGNRYKFILRDDPGWDSANFGFSFDTVAGEWITVDAP 198

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BLAST of mRNA_Ecto-sp13_S_contig15871.4313.1 vs. uniprot
Match: UPI0019B55518 (CIA30 family protein n=3 Tax=Cyanobacteria TaxID=1117 RepID=UPI0019B55518)

HSP 1 Score: 117 bits (293), Expect = 1.430e-30
Identity = 58/112 (51.79%), Postives = 74/112 (66.07%), Query Frame = 0

Query:    1 MGGVSESGLRVVPGAGETDASIGSGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWMDVDIPFSTL 112
            MGGVS+SG+++  GA               AVFSG V T+NSGGF SIRTRN  P +DLSA+  + LR+KGDGNRYKF + D  GW++  +  +FDTV GEW+ V IPF+ L
Sbjct:   70 MGGVSDSGIQLENGA---------------AVFSGNVSTANSGGFASIRTRNFDPAIDLSAFTGIELRIKGDGNRYKFLVRDDDGWDTVGYSHSFDTVSGEWITVQIPFAQL 166

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BLAST of mRNA_Ecto-sp13_S_contig15871.4313.1 vs. uniprot
Match: A0A0S3TYT0_9CYAN (CIA30 domain-containing protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A0S3TYT0_9CYAN)

HSP 1 Score: 116 bits (290), Expect = 3.940e-30
Identity = 60/112 (53.57%), Postives = 72/112 (64.29%), Query Frame = 0

Query:    1 MGGVSESGLRVVPGAGETDASIGSGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWMDVDIPFSTL 112
            MGGVS+SG+R+  GA               AVFSG V T+NSGGF SIRTRN  P +DLS +  + LRVKGDGNRYKF + D  GW+S  +  +FDTV  EW+ V IPFS L
Sbjct:   70 MGGVSDSGVRLENGA---------------AVFSGNVSTANSGGFASIRTRNFEPAIDLSNFTGIELRVKGDGNRYKFLVRDGDGWDSVGYSHSFDTVANEWITVQIPFSEL 166

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BLAST of mRNA_Ecto-sp13_S_contig15871.4313.1 vs. uniprot
Match: A0A1Z4JIV9_LEPBY (CIA30 domain-containing protein n=2 Tax=Leptolyngbya TaxID=47251 RepID=A0A1Z4JIV9_LEPBY)

HSP 1 Score: 114 bits (284), Expect = 2.770e-29
Identity = 58/110 (52.73%), Postives = 69/110 (62.73%), Query Frame = 0

Query:    1 MGGVSESGLRVVPGAGETDASIGSGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWMDVDIPFS 110
            MGGVS SG+R+  G                AVF+G V   NSGGF S+RTRN  PPLDLS    + LR+KGDGNRYKF I DS GW+S  +  +FDTV GEWM + IPF+
Sbjct:   65 MGGVSNSGIRLEGGV---------------AVFTGNVSIENSGGFASVRTRNFDPPLDLSNRSGVELRIKGDGNRYKFLIRDSDGWDSTGYSYSFDTVAGEWMTIQIPFA 159

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BLAST of mRNA_Ecto-sp13_S_contig15871.4313.1 vs. uniprot
Match: K9S7G1_9CYAN (NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 n=1 Tax=Geitlerinema sp. PCC 7407 TaxID=1173025 RepID=K9S7G1_9CYAN)

HSP 1 Score: 116 bits (290), Expect = 9.970e-29
Identity = 58/112 (51.79%), Postives = 73/112 (65.18%), Query Frame = 0

Query:    1 MGGVSESGLRVVPGAGETDASIGSGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWMDVDIPFSTL 112
            MGGVSESGLR+ P +               A F+G V T+NSGGF S+RTRN  PPL+LS YD + LRV+GDG RYKF +    GW+S A+C +FDTV G+W +V +PF  L
Sbjct:  179 MGGVSESGLRLGPNS---------------AFFTGVVSTANSGGFASVRTRNFEPPLNLSPYDGVALRVRGDGQRYKFMLRTEGGWDSVAYCASFDTVAGQWCEVRLPFREL 275

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig15871.4313.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig15871.4313.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KMW5_9PHAE	4.830e-67	97.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LL63_ECTSI	6.320e-66	93.81	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A0G4FWF9_VITBC	6.080e-35	61.61	Uncharacterized protein n=2 Tax=Vitrella brassicaf...	[more]
A0A835ZH41_9STRA	7.930e-34	58.93	Complex I intermediate-associated protein 30-domai...	[more]
A0A7S2UWN3_9STRA	7.440e-33	57.66	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S4DIU2_HETAK	5.700e-32	60.00	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
UPI0019B55518	1.430e-30	51.79	CIA30 family protein n=3 Tax=Cyanobacteria TaxID=1...	[more]
A0A0S3TYT0_9CYAN	3.940e-30	53.57	CIA30 domain-containing protein n=2 Tax=Pseudanaba...	[more]
A0A1Z4JIV9_LEPBY	2.770e-29	52.73	CIA30 domain-containing protein n=2 Tax=Leptolyngb...	[more]
K9S7G1_9CYAN	9.970e-29	51.79	NADH:ubiquinone oxidoreductase complex I intermedi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.120.430		coord: 11..113 e-value: 2.4E-10 score: 42.8
None	No IPR available	PANTHER	PTHR13194:SF19	NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN	coord: 1..113
IPR013857	NADH:ubiquinone oxidoreductase intermediate-associated protein 30	PFAM	PF08547	CIA30	coord: 1..112 e-value: 1.4E-26 score: 93.4
IPR039131	Complex I intermediate-associated protein 30, mitochondrial	PANTHER	PTHR13194	COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 30	coord: 1..113
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 20..112

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig15871	contig	Ecto-sp13_S_contig15871:507..1277 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig15871.4313.1	mRNA_Ecto-sp13_S_contig15871.4313.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig15871 504..1277 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig15871.4313.1 ID=prot_Ecto-sp13_S_contig15871.4313.1|Name=mRNA_Ecto-sp13_S_contig15871.4313.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=114bp
MGGVSESGLRVVPGAGETDASIGSGSPAAAAVFSGEVKTSNSGGFVSIRT
RNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKG
EWMDVDIPFSTLK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013857	NADH-UbQ_OxRdtase-assoc_prot30
IPR039131	NDUFAF1
IPR008979	Galactose-bd-like_sf