prot_Ecto-sp13_S_contig15852.4304.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15852.4304.1
Unique Nameprot_Ecto-sp13_S_contig15852.4304.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length235
Homology
BLAST of mRNA_Ecto-sp13_S_contig15852.4304.1 vs. uniprot
Match: D8LKB4_ECTSI (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB4_ECTSI)

HSP 1 Score: 358 bits (918), Expect = 5.340e-123
Identity = 225/234 (96.15%), Postives = 226/234 (96.58%), Query Frame = 0
Query:    1 ACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPAAAKKGEAGGDMMEEPDADDGETDGAGAGAGDDAQGGGDRVVNAAGSADAQRQQQSGAVPGGGEAGAIATPTGMNVERQELQSGLQGQQPXXXXXXXXASAGLAPMDEDGGSHAAPAXXXXXXXXXXXXEGGVVG 234
            ACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPAAAKKGEAGGDMMEEP+ADDGETDGAGAGAGDDAQGG DRVVNAAGSADA RQQQSGAVPGGGEAGAIATPTGMNVERQE  SGLQ    XXXXXXXXASAGLAPMDEDGGSHAAPAXXXXXXXXXXXXEGGVVG
Sbjct:   14 ACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPAAAKKGEAGGDMMEEPEADDGETDGAGAGAGDDAQGGRDRVVNAAGSADAHRQQQSGAVPGGGEAGAIATPTGMNVERQEPPSGLQXXXXXXXXXXXXASAGLAPMDEDGGSHAAPAXXXXXXXXXXXXEGGVVG 247          
BLAST of mRNA_Ecto-sp13_S_contig15852.4304.1 vs. uniprot
Match: A0A6V1RK43_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RK43_HETAK)

HSP 1 Score: 126 bits (316), Expect = 8.290e-33
Identity = 59/78 (75.64%), Postives = 72/78 (92.31%), Query Frame = 0
Query:    1 ACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLD 78
            AC+QR++K+VLPDN+QIGKDAKAAF+R+AGIFIMYLTACANDFCRE+KRQTI+  DVM AI ELEF +L EPLK++L+
Sbjct:   41 ACIQRIVKAVLPDNIQIGKDAKAAFARAAGIFIMYLTACANDFCRESKRQTITGPDVMMAISELEFHDLVEPLKDFLE 118          
BLAST of mRNA_Ecto-sp13_S_contig15852.4304.1 vs. uniprot
Match: A0A7S2SN07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN07_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.680e-30
Identity = 72/123 (58.54%), Postives = 89/123 (72.36%), Query Frame = 0
Query:    1 ACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPAAAKKGEAGGDMMEEPDADDGETD 123
            ACVQR+IKS LPDN QI K++KAAFS++AGIFI+YLT CANDFC+E KR TIS+ DVM A++ELEF +L  PL+E+L  YR++AS KK   AA   A   AA   E  G   ++  ADDGE D
Sbjct:   76 ACVQRIIKSALPDNCQITKESKAAFSKAAGIFIIYLTTCANDFCKENKRSTISSADVMSAMRELEFHDLMGPLEEFLTNYRKDASTKKDGVAAATVASAPAAD-AELPGKKSDKAAADDGEDD 197          
BLAST of mRNA_Ecto-sp13_S_contig15852.4304.1 vs. uniprot
Match: A0A7S2DWQ9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DWQ9_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.530e-27
Identity = 63/121 (52.07%), Postives = 88/121 (72.73%), Query Frame = 0
Query:    1 ACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPAAAKKGEAGGDMMEEPDADDGE 121
            ACVQR+IK VLPD+ QI K++K AFS++AGIFI+YLT CANDFC+E KR TIS+ DV+ A++ELEF +L  PL+E+L  YR++ +AKK+   +   A  A       GG++ ++PD+  GE
Sbjct:   29 ACVQRIIKGVLPDSCQITKESKTAFSKAAGIFIIYLTTCANDFCKEGKRSTISSADVLAALRELEFHDLIGPLEEFLAHYRQDTNAKKELGNSSAKAAHAITAVPNGGGNVEQQPDSGIGE 149          
BLAST of mRNA_Ecto-sp13_S_contig15852.4304.1 vs. uniprot
Match: A0A7S3HH50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH50_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.910e-25
Identity = 50/88 (56.82%), Postives = 71/88 (80.68%), Query Frame = 0
Query:    1 ACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKK 88
            ACV RV+K+ LP+N+ + KDA+AAF R+AGIFI YLT C+NDFCRE+KR TI  QDVM A++EL F + E+PL+E+L+ Y++++  +K
Sbjct:   21 ACVSRVMKAALPENILLTKDARAAFVRAAGIFIFYLTHCSNDFCRESKRATIFPQDVMAALRELGFEDFEKPLEEFLEAYKKDSEQRK 108          
BLAST of mRNA_Ecto-sp13_S_contig15852.4304.1 vs. uniprot
Match: A0A1E7FAU9_9STRA (CBFD_NFYB_HMF domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAU9_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.130e-24
Identity = 53/92 (57.61%), Postives = 67/92 (72.83%), Query Frame = 0
Query:    1 ACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKA 92
            ACV+R++K  LP +  +GKDA AAF+R++GIFI+YLTACANDF RE +RQTI+A DV+ AIKELEF E    L  +L+ YR     KK  KA
Sbjct:    3 ACVRRILKKTLPSSSNVGKDAVAAFARASGIFIIYLTACANDFARENRRQTITANDVLAAIKELEFDEFSPELTSFLEGYREAEKNKKDVKA 94          
BLAST of mRNA_Ecto-sp13_S_contig15852.4304.1 vs. uniprot
Match: A0A7S2WSI8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WSI8_9STRA)

HSP 1 Score: 105 bits (262), Expect = 4.220e-24
Identity = 52/95 (54.74%), Postives = 72/95 (75.79%), Query Frame = 0
Query:    1 ACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMG 95
            ACV+R++KS LP +  +GKDA +AF+R+ GIF++YLTACANDF RE KRQTI+A D+M +IKEL+F E    L  +L+Q+R+E   K++ K A G
Sbjct:   38 ACVRRLLKSSLPTSTNVGKDASSAFARACGIFVIYLTACANDFARENKRQTITANDIMASIKELDFDEFTPQLTGFLEQHRKEEKEKRERKKASG 132          
BLAST of mRNA_Ecto-sp13_S_contig15852.4304.1 vs. uniprot
Match: A0A7S1UNS2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNS2_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.230e-23
Identity = 48/93 (51.61%), Postives = 70/93 (75.27%), Query Frame = 0
Query:    1 ACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAA 93
            AC++R++K  LP +  +GKDA AAF+R+ GIF++Y+TACANDF  E +RQTI+A DV+ A+KEL+F E    LK +L+ YR    +K+++KAA
Sbjct:   25 ACIRRILKHALPSSTNVGKDASAAFARACGIFVIYITACANDFAHENRRQTITANDVLAALKELDFDEFTPQLKTFLENYRAAEKSKREAKAA 117          
BLAST of mRNA_Ecto-sp13_S_contig15852.4304.1 vs. uniprot
Match: A0A6U9ZNZ1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZNZ1_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.450e-23
Identity = 54/93 (58.06%), Postives = 70/93 (75.27%), Query Frame = 0
Query:    1 ACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAA 93
            ACV+R++K  LP +  +GKDA AAF+R++GIFI+YLTACANDF RE +RQTI+A DV+ AIKELEF E    L  +L++YR     KK +KAA
Sbjct:   50 ACVRRILKQTLPSSSNVGKDAVAAFARASGIFIIYLTACANDFARENRRQTITANDVLAAIKELEFDEFAPELSTFLERYRELEKNKKDAKAA 142          
BLAST of mRNA_Ecto-sp13_S_contig15852.4304.1 vs. uniprot
Match: A0A7S1D791_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D791_CYCTE)

HSP 1 Score: 103 bits (256), Expect = 1.530e-23
Identity = 47/92 (51.09%), Postives = 72/92 (78.26%), Query Frame = 0
Query:    1 ACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKA 92
            ACV+R++K+ LP +  +GKDA AAF+R+ GIF++Y+TACANDF RE++RQTI+A DV+ ++KEL+F E    L+ +LD++R    +K+ +KA
Sbjct:   37 ACVRRILKNALPSSTNVGKDASAAFARACGIFVIYITACANDFARESRRQTITANDVLASVKELDFDEFSPHLEAFLDRHRAAEKSKRDAKA 128          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15852.4304.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKB4_ECTSI5.340e-12396.15CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ec... [more]
A0A6V1RK43_HETAK8.290e-3375.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SN07_9STRA1.680e-3058.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2DWQ9_9STRA1.530e-2752.07Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3HH50_9STRA1.910e-2556.82Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A1E7FAU9_9STRA1.130e-2457.61CBFD_NFYB_HMF domain-containing protein (Fragment)... [more]
A0A7S2WSI8_9STRA4.220e-2454.74Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1UNS2_9STRA1.230e-2351.61Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A6U9ZNZ1_9STRA1.450e-2358.06Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S1D791_CYCTE1.530e-2351.09Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 2..61
e-value: 3.6E-11
score: 43.2
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..127
e-value: 8.4E-34
score: 118.3
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 1..101
NoneNo IPR availablePANTHERPTHR46172DNA polymerase epsilon subunit 3coord: 1..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15852contigEcto-sp13_S_contig15852:568..1966 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15852.4304.1mRNA_Ecto-sp13_S_contig15852.4304.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15852 568..1966 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15852.4304.1 ID=prot_Ecto-sp13_S_contig15852.4304.1|Name=mRNA_Ecto-sp13_S_contig15852.4304.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=235bp
ACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQ
TISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPA
AAKKGEAGGDMMEEPDADDGETDGAGAGAGDDAQGGGDRVVNAAGSADAQ
RQQQSGAVPGGGEAGAIATPTGMNVERQELQSGLQGQQPPPPQQPPAASA
GLAPMDEDGGSHAAPAPAPAVPAAAGSGEGGVVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003958CBFA_NFYB_domain
IPR009072Histone-fold