mRNA_Ecto-sp13_S_contig15731.4228.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15731.4228.1
Unique NamemRNA_Ecto-sp13_S_contig15731.4228.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: A0A6H5KYK6_9PHAE (Aldo_ket_red domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYK6_9PHAE)

HSP 1 Score: 412 bits (1058), Expect = 9.390e-142
Identity = 202/204 (99.02%), Postives = 203/204 (99.51%), Query Frame = 1
Query:    1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
            LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKE+DDDT FEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ
Sbjct:   82 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKERDDDTSFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 285          
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: A0A836CJ26_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ26_9STRA)

HSP 1 Score: 270 bits (691), Expect = 3.200e-87
Identity = 128/204 (62.75%), Postives = 163/204 (79.90%), Query Frame = 1
Query:    1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
            LG SDLVVS+ CLGTMTWGEQN+DEEA+EQ ++AF EFG+NFID AEMYPV P+ ETQGRT+IA+ KWLK   R +VV+A+KV GR D  T++R  G+  RV R +I+E+VD SL+RL TDY+DLLQ+HWPDR VP+FG +E Y+ AKE+DDD  FE+QL  ++E+ +AGKVR IG SN+TP+G+ K  +L ERLG PRV S+Q
Sbjct:   23 LGSSDLVVSEVCLGTMTWGEQNTDEEAYEQLSVAFDEFGINFIDTAEMYPVQPRAETQGRTDIAISKWLKDRNREDVVLASKVCGRQDTNTYIRKSGQPPRVRRADIVESVDASLQRLGTDYLDLLQVHWPDRYVPIFG-DESYNYAKERDDDVAFEDQLRGLEEVVKAGKVRHIGVSNETPFGVAKFVELSERLGLPRVCSIQ 225          
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: A0A835Z0T2_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T2_9STRA)

HSP 1 Score: 264 bits (674), Expect = 3.250e-84
Identity = 127/204 (62.25%), Postives = 158/204 (77.45%), Query Frame = 1
Query:    1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
            LG SDLVVS+ CLGTMTWGEQNSDEEA++Q  +A  EFG+NFID AE+YPVP K ET GRT+ A+ KWLK   R ++V+A+KVAGR+  L  LR  G+ TRV + +IIE+VDKSL+RL TDY+DLLQ+HWPDR VPLFG    YD  +E+ DD PFEEQL+ ++E+ +AGKVR IG SN+TPYG+ K   L E+LG PRV S+Q
Sbjct:   58 LGSSDLVVSEVCLGTMTWGEQNSDEEAYQQLKLAVDEFGINFIDTAELYPVPAKAETSGRTDKAIAKWLKGRKREDIVLASKVAGRAAHLGHLRSSGEPTRVRKADIIESVDKSLQRLGTDYLDLLQVHWPDRYVPLFGGG-IYDYEQERSDDIPFEEQLQALEEVIKAGKVRNIGLSNETPYGVMKFVTLAEQLGLPRVCSIQ 260          
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: L1JG80_GUITC (Aldo_ket_red domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JG80_GUITC)

HSP 1 Score: 252 bits (643), Expect = 3.250e-80
Identity = 121/204 (59.31%), Postives = 151/204 (74.02%), Query Frame = 1
Query:    1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
            LG SDL+VS+ CLGTMTWG+QN++EEA +Q N AF +FGVNFID AE YP+P +PET G T+I +GKW+K   R  V++ATKV G+S RL W RDDG+GTRV +K ++E+V+KSLKRL TDYIDLLQIHWPDR VPLFG N +YD+  E     PFEEQLE M+EL + GK+R  G SN+TP+G+     L    G  +  SVQ
Sbjct:    6 LGDSDLIVSEVCLGTMTWGKQNTEEEAIQQLNTAFDDFGVNFIDTAEGYPIPLQPETSGATDIIIGKWMKQRPRDQVILATKVCGKSSRLKWFRDDGQGTRVTKKQVVESVEKSLKRLQTDYIDLLQIHWPDRYVPLFGPN-KYDITLETPA-VPFEEQLEAMNELIQQGKIRHWGLSNETPFGVMAFVSLALEQGMAKPVSVQ 207          
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: A0A7S1DYG4_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DYG4_HEMAN)

HSP 1 Score: 247 bits (631), Expect = 3.770e-77
Identity = 118/204 (57.84%), Postives = 151/204 (74.02%), Query Frame = 1
Query:    1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
            LG SDL+VS+ CLGTMTWG+QNS+E+A +Q + AF ++GVNFID AE YP+P +PETQG T+  +GKW+K   R  +V+ATK+ G S RL W RDDGKGTRVNRK + E++DKSL+RLDTDY+DL QIHWPDR VPLFG N +YD   E+   T FEEQLE + +L + GK+R  G SN+TP+G+     L   LG P+  S+Q
Sbjct:   85 LGDSDLLVSEVCLGTMTWGKQNSEEQAMKQLDCAFDDYGVNFIDTAEGYPIPLQPETQGDTDRLIGKWMKGRPRDKIVLATKMCGASQRLNWFRDDGKGTRVNRKQVFESLDKSLQRLDTDYVDLFQIHWPDRYVPLFGPN-KYDEKMERAA-TSFEEQLEALADLIKEGKIRHWGLSNETPFGVMAFVSLAMELGLPKPVSIQ 286          
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: L1J0D5_GUITC (Aldo_ket_red domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1J0D5_GUITC)

HSP 1 Score: 243 bits (620), Expect = 2.530e-76
Identity = 124/206 (60.19%), Postives = 153/206 (74.27%), Query Frame = 1
Query:    1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRD-DGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVP-LFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
            LG SDL VS+ CLGTMTWG+QN+ EE  EQ N+AF EFGVNFID AEMYP+P K ETQG T+  + KWLK+  R +VV+ATKVAG SDR+TWL   DGKG+RV RK I+ +VD+SLKRL+TDYIDLLQIHWPDR +  LFGA   YD++K  +    FEEQL   DEL R GKVR +G SN++P+G+     L ++L  P+V S+Q
Sbjct:    6 LGNSDLKVSRCCLGTMTWGQQNTMEEGVEQLNVAFDEFGVNFIDTAEMYPIPVKAETQGDTDRTIAKWLKTKRREDVVLATKVAGYSDRITWLPGRDGKGSRVTRKEILTSVDESLKRLNTDYIDLLQIHWPDRHMGNLFGAPGTYDISKVYES-VSFEEQLRAFDELIRQGKVRYMGVSNESPFGVMNFHFLSKQLNLPQVVSIQ 210          
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: A0A7S2XWE6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWE6_9STRA)

HSP 1 Score: 243 bits (620), Expect = 4.450e-76
Identity = 124/207 (59.90%), Postives = 158/207 (76.33%), Query Frame = 1
Query:    1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKS--VARHNVVVATKVAGRSDRLTWLRD-DGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
            LG SDL+VS+ CLGTMTWG QN+DEE  EQ +  F+E G NF D AEMYPVP   ETQGRT+  + KW++S  + R  +V+ATKVAG SDR+TWL   +G+G+RV +K II +VD+SLKRL TDYIDLLQIHWPDR VPLFG +  Y++++E++  T FEEQLE M E+ +AGKVR IG SN+TPYG+ K  QL ++LG PR+ S+Q
Sbjct:   56 LGSSDLMVSEVCLGTMTWGVQNTDEEGAEQMDYYFNECGGNFFDTAEMYPVPTTAETQGRTDNCIRKWMQSRGIDRSKLVLATKVAGASDRITWLPGRNGEGSRVTKKEIITSVDESLKRLGTDYIDLLQIHWPDRYVPLFGTS-GYNISEEREA-TSFEEQLEGMQEVIQAGKVRYIGVSNETPYGVMKFCQLADQLGLPRICSIQ 260          
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: A0A7S4DXK6_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DXK6_9EUKA)

HSP 1 Score: 242 bits (618), Expect = 1.870e-75
Identity = 118/206 (57.28%), Postives = 152/206 (73.79%), Query Frame = 1
Query:    1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLK--SVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
            LG SDL+VS+ CLGTMTWGEQN+++E  EQ   AF + G+NF+D AE YP+P K ETQGRT+  + +W+K  ++AR  VV+ATKV G SD LTW R +G+GT+V+   IIE+VD SL+RL+TDYIDLLQIHWPDR VPLFGAN RY + +E+D   PFEEQ+  M +L + GK+R  G SN+TPYG   M +  E+LG P   S+Q
Sbjct:   82 LGNSDLMVSEVCLGTMTWGEQNTEDEGVEQLRTAFDDMGINFLDTAEAYPIPLKAETQGRTDRTIARWMKESNIARDKVVLATKVCGNSDGLTWFRKNGEGTKVSYDQIIESVDASLERLNTDYIDLLQIHWPDRYVPLFGAN-RYKIGEERDS-IPFEEQVRAMGDLIKQGKIRYWGLSNETPYGTMMMVKAAEKLGVPPPVSIQ 285          
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: B8C7K3_THAPS (Aldo_ket_red domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7K3_THAPS)

HSP 1 Score: 234 bits (598), Expect = 2.340e-73
Identity = 120/209 (57.42%), Postives = 154/209 (73.68%), Query Frame = 1
Query:    1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVP-LFGANE--RYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLG--YPRVASVQ 612
            LG S+LVVSK C+GTMT+GEQN+ EE  EQ N AF E+GVNF+D AEMYPVP K ET G+T+ A+  +LKS  R +V++ATKV+GRSDR+ WLR DG  T VNRK I+E+VD SL+RL TDYIDLLQIHWPDR    LFG  +    ++ +++++   FEEQL  M+EL  AGKVR IG SN+TP+G+  M +L +     YPR+AS+Q
Sbjct:    6 LGSSELVVSKVCMGTMTFGEQNTLEEGVEQLNRAFDEYGVNFLDTAEMYPVPTKAETAGKTDKAVASFLKSFPRQDVILATKVSGRSDRINWLRTDGSSTIVNRKQILESVDASLERLGTDYIDLLQIHWPDRYTGGLFGQKDFSPRELQQKEEEYVSFEEQLSTMNELVEAGKVRYIGVSNETPFGVCSMVELAKHNPQLYPRIASIQ 214          
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: A0A7S4EDL0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDL0_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.370e-71
Identity = 115/206 (55.83%), Postives = 151/206 (73.30%), Query Frame = 1
Query:    1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHN-VVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGER-LGYPRVASVQ 612
            LG SDLVVS  CLGTMTWG+QN+ EE  +Q + AF E+G+NF+D AEMYPVP + ETQG+T+  +G WLK   R + VV+A+K+ G S+R+TW+R DG+GTRV   +I+E V+ SL+RL TDYIDLLQIHWPDR VPLFG+   YD ++E++   PF EQL+ + +L   GKVR IG SN+TPYG+ +  Q  ER    PR+ S+Q
Sbjct:   33 LGTSDLVVSDVCLGTMTWGKQNTLEEGVQQLDCAFDEYGLNFLDTAEMYPVPTEAETQGKTDETIGAWLKKRGRRDDVVLASKICGASERITWVRGDGRGTRVTEADIVEGVEGSLRRLGTDYIDLLQIHWPDRYVPLFGSG-TYDASQEREA-VPFVEQLQALKKLVDQGKVRHIGVSNETPYGVCRFIQEHERDASLPRICSIQ 236          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYK6_9PHAE9.390e-14299.02Aldo_ket_red domain-containing protein n=2 Tax=Ect... [more]
A0A836CJ26_9STRA3.200e-8762.75NADP-dependent oxidoreductase domain-containing pr... [more]
A0A835Z0T2_9STRA3.250e-8462.25NADP-dependent oxidoreductase domain-containing pr... [more]
L1JG80_GUITC3.250e-8059.31Aldo_ket_red domain-containing protein n=1 Tax=Gui... [more]
A0A7S1DYG4_HEMAN3.770e-7757.84Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
L1J0D5_GUITC2.530e-7660.19Aldo_ket_red domain-containing protein n=2 Tax=Gem... [more]
A0A7S2XWE6_9STRA4.450e-7659.90Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4DXK6_9EUKA1.870e-7557.28Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
B8C7K3_THAPS2.340e-7357.42Aldo_ket_red domain-containing protein n=1 Tax=Tha... [more]
A0A7S4EDL0_9STRA1.370e-7155.83Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15731contigEcto-sp13_S_contig15731:3..3552 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score411.8
Seed ortholog evalue1.9e-112
Seed eggNOG ortholog2880.D8LAT8
Model size612
KEGG koko:K09338,ko:K14521
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.oxidoreductase activity
EggNOG OGsCOG0667@1,KOG1575@2759
Ec32 ortholog descriptionNADP-dependent oxidoreductase domain
Ec32 orthologEc-27_006410.1
Cds size612
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15731.4228.1prot_Ecto-sp13_S_contig15731.4228.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15731 3..3552 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462831.922333-CDS-Ecto-sp13_S_contig15731:2..1311681462831.922333-CDS-Ecto-sp13_S_contig15731:2..131Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15731 3..131 +
1681462831.9428232-CDS-Ecto-sp13_S_contig15731:649..7661681462831.9428232-CDS-Ecto-sp13_S_contig15731:649..766Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15731 650..766 +
1681462831.9538376-CDS-Ecto-sp13_S_contig15731:1626..17611681462831.9538376-CDS-Ecto-sp13_S_contig15731:1626..1761Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15731 1627..1761 +
1681462831.9641843-CDS-Ecto-sp13_S_contig15731:2265..23251681462831.9641843-CDS-Ecto-sp13_S_contig15731:2265..2325Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15731 2266..2325 +
1681462831.9741452-CDS-Ecto-sp13_S_contig15731:3027..30991681462831.9741452-CDS-Ecto-sp13_S_contig15731:3027..3099Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15731 3028..3099 +
1681462831.9838293-CDS-Ecto-sp13_S_contig15731:3453..35521681462831.9838293-CDS-Ecto-sp13_S_contig15731:3453..3552Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15731 3454..3552 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15731.4228.1

>prot_Ecto-sp13_S_contig15731.4228.1 ID=prot_Ecto-sp13_S_contig15731.4228.1|Name=mRNA_Ecto-sp13_S_contig15731.4228.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=204bp
LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYP
VPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGT
RVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQ
DDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRV
ASVQ
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mRNA from alignment at Ecto-sp13_S_contig15731:3..3552+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15731.4228.1 ID=mRNA_Ecto-sp13_S_contig15731.4228.1|Name=mRNA_Ecto-sp13_S_contig15731.4228.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3550bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15731:3..3552+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTAGGGAAGAGCGACCTCGTGGTTAGCAAGGCGTGCCTTGGCACGATGAC GTGGGGGGAGCAGAATAGCGACGAAGAGGCCTTCGAGCAGTGCAACATGG CCTTTCACGAGTTTGGCGTCAACTTCATTGTGAGTAGCGTGTCGACACGA AGATGTACCCTCAAGCTGTGAGTGTCATGCTCTTTTTTGGAGGTCGCATT GTTGTGCGGAGGAATTCGCCTCATTTGAGAACTTTTCAGTGAAAAAGGTG GGGGCTCTTGCCACGGGCATGGAGTGATTCTACACACGAGCTAGAGAAGA GTACTGACGCAAACATGCACCACGAGGTTGAAGGAAGTTTCGGATGGGCA GTCACGGCCCTTGGCGTAACTGAAATGAAGCGAATGTTTGTTAGCGAGGG TTCTTGCAACGGGTATAGAGTGAATCTACACGCGAGCTATCTGGCAGGGT ACTGACGCAAACATGTACCGCCAGGTTGAAGGAAGCTTCGAATGGGTGGT TACAGCACCTGGCGTAACTGGGCGCGTATCTGCGCCACTTCTCCATTGAG AGGGATCCCTACCAACGTCGGGAAATACTTTCGCGCCGCTCCTGGCCACC CTCGAACTCGACTCATTCCTCGTTATTGATCTGAATGAAAATAAAAGGAT GCGGCGGAAATGTACCCGGTGCCACCCAAGCCGGAGACGCAGGGTAGGAC TGAGATAGCCTTGGGAAAGTGGCTCAAGTCCGTCGCGAGGCACAACGTAG TTGTGGCCACCAAGGTGAGGAAATTACCTCGTCGGACTGCTCAATCGGTC ATGCTTCCGTCGATTGGACGCTTTTACCTGGGAAACTTGCGAGTGCGAAG CTGTACGGTGGGGTGACGGCAGTGAACATGGCGTTAGACGAATAGTGTAT TCCAATACTCGCAGCAGCTCTTTTGTCAAGTCGATAACGAGAAGTGGAGC CATGTTGATGATGATCCCCTAGATATGGGCTCTCCCTGAGCACAGCGTAG TCTTGGTCAAGACGGCCAGACTCGCTCTTCGCCCAGACCCGCCCTACACC CAACCCCTAGGCCATGTAGCATTTCAAGTATCGGATCGGGTTCAATTGAT CCTGACGGGCGTTTTATTCCCCGGGAACGTTCATCCAATCCCTCTTGATC ACTATTTGCCCGGGTTAATTGATCCATGAGATGTCTTGTCACGTCGGCCG GCCCCCCCCCTGCAAGCTTGTTGCGGTATAATCGCATGTCGAGCTGGCTC TATGGAGGGGGAACATCTTCCTTGTGATCCTTTTTTCTTTCTATCTGTCC ATGCACGTGTCCCTGTGTCTTTCTTCCTTTCGCTTGGGCTACCATCTGGT ACTATCGTAGCCCCAAAGTTTTTGCACCCTTGATTGATGCTTCACGCGAA ATGTTTGACCGCCATACATGGTCATGGCGTGATTTGTGGAACACGGTTGA CCTCGAAAGTGGAAGCAAATTCGTGCATATCTCGCACCGCGAGGGTTGTT TGGCCATCATTTACTTTTTTTTCTTCTATCACGTTTTTTTGCTCTGCACG ACTCTCCTCCCTCTTGTGTATCGCGCCACTTGTGATGTCTCTGACGATTG TTTTGTTGCCTTGGTGACGTGGAGGTGGCCGGTAGGAGCGATAGATTAAC GTGGCTAAGGGACGACGGGAAAGGCACGAGGGTGAACCGAAAAAACATCA TAGAGGCGGTCGACAAGTCTCTCAAGAGGCTCGACACCGACTACATCGAC CTGCTTCAGGTGCGGCGTTATTCTTGCTTGTTTGTGGGTGTTTCTTATCG TCACGCGCGTGCGTTTGGGCACCTACATATGCCTGGATGGTTCGGGTTGT GCAACGTGATTTTGGCCGCCTCTCGAGAGGCTAAACCTCGACGTAATTTG AGCTACGAACGGGCATCACTTGTATGGTGGCATGTTTGTGTCTTCGCTGT GCCGTGGCCGAAGCGTTACGCGCGTTGCGTGCGTACTGTTCCTGTGCATA ACATTTTACTCGGGCTTGACGATTTCCTTTGTTTTTCACGTGGTCGGGCG TACAGTTGGCCATGTATTGGTGTCCTCGATCCAGGGTTGAACCCCGAGGA CATCGATCGAGCTTCCCCAGGCGACGGTTTGCCGTGCCCCATCACGCGAG GTCCACGCCGGTTTATCAGGCGAGGGTTGACCCTCACCCTTCCTCTTTGA CCCCATTCTACCACCGTTTCTCTCTTTCTGCCGGTCGACGTTGGTCTTCC AACGACGTGACAGATCCACTGGCCGGACCGTGCGGTGCCTTTGTTCGGGG CTAACGAGCGCTACGACGTTGCGGTACGAAGATGAACCTCGTTTGCCACG GGGGGGGGGTGTACTCATTCTCATAGTCGTGCATACCGTAGTCTTTAGAC CATTGACCTCGCATCCCTACAAAGCCGGGACTGGGCACGCTGGGTTCTCA CCGGACGAGGCTCTCACATCACCAAGCGTGAAGCGCCGTGAGGTGTTCGG CGAGTCGCATGAACGGTGCGCTGCATCCTGCTAAGGGTGTTCGGTATCTT GTGCTTGCTTCCTCGCGTACGGAAGACAGCTGTGTATTACTTATATTTTC TGGTGCTTTCACCAGAGACTGTTGTAACACGGTGTAACTCCCTCGAGGGT GTTGACCAATTTAGCACAACGTGGTGCGATTATTCCCTCGGCGCGGAGTG AGGGTAGTGATGGTTCTCACCCCGTACAACATAATCTACTCGACCACCAT TCATGGTCACCGGGGGGTGTGTGGAGAAAAATGGTATCGTTGTGTGGTGG AGTGGAGACTGCTCATCCTCCTACACGGCGAGCTCATGATTATGGGTGGG GGAAGGCGCGGCTTTGTGGCCTTGATTTCACCTGGGTTCTCCATGCTGTG GGTGCTGACGAAACTTCCTCTCTTTGTTTGGCTGGTGTTGACGTTGTTCG CCGTTCTTGGCCGTGATGACGGTGATGACGGTGTCGATGGTGTTGATGGT TCATCTCTTATCTCATCTCGAGCAGAAAGAACAAGATGACGACACACCCT TCGAGGAGCAGCTGGAGGTCATGGACGAGCTTTGCCGGGCAGGAAAGGTA ACAGCTCTGGGGGTGGGGAGTGATTGACTCTGCTCTCGCTTGGATGGTGG GAAGAAAGCCATGTTTTTCCCACCAACCCGAGCCTCCTTGGCGGCGTGGC GTTCATGCTGATGAAACAGTTTTGGCGTTAGATCAACCACCATGTGAACC GTTTCGCCTCTGTGCTTCGTCTTTCGAAAACTTCGAGTATTTGCAGTGGT GAGGCTCCTTCTTCCCTGCATCCATCGATGTTTCCGAGAAGTGGTGTTCC TGTGTGTCTTCCCGTTGTTCACTGACGAAGCTTGCCGGTCGTCCTGTGGC TGTTGCCCTTGTTTGCCACCGCCGCTGTTGCCGCCGCGGCTGTCGCCGAA GGTTCGTGCAATCGGCACGAGCAACGACACTCCGTATGGCATCACCAAGA TGGCGCAGCTTGGCGAGCGATTGGGCTACCCACGAGTAGCGTCGGTGCAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15731:3..3552+

>mRNA_Ecto-sp13_S_contig15731.4228.1 ID=mRNA_Ecto-sp13_S_contig15731.4228.1|Name=mRNA_Ecto-sp13_S_contig15731.4228.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=612bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15731:3..3552+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTAGGGAAGAGCGACCTCGTGGTTAGCAAGGCGTGCCTTGGCACGATGAC
GTGGGGGGAGCAGAATAGCGACGAAGAGGCCTTCGAGCAGTGCAACATGG
CCTTTCACGAGTTTGGCGTCAACTTCATTGATGCGGCGGAAATGTACCCG
GTGCCACCCAAGCCGGAGACGCAGGGTAGGACTGAGATAGCCTTGGGAAA
GTGGCTCAAGTCCGTCGCGAGGCACAACGTAGTTGTGGCCACCAAGGTGG
CCGGTAGGAGCGATAGATTAACGTGGCTAAGGGACGACGGGAAAGGCACG
AGGGTGAACCGAAAAAACATCATAGAGGCGGTCGACAAGTCTCTCAAGAG
GCTCGACACCGACTACATCGACCTGCTTCAGATCCACTGGCCGGACCGTG
CGGTGCCTTTGTTCGGGGCTAACGAGCGCTACGACGTTGCGAAAGAACAA
GATGACGACACACCCTTCGAGGAGCAGCTGGAGGTCATGGACGAGCTTTG
CCGGGCAGGAAAGGTTCGTGCAATCGGCACGAGCAACGACACTCCGTATG
GCATCACCAAGATGGCGCAGCTTGGCGAGCGATTGGGCTACCCACGAGTA
GCGTCGGTGCAG
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