mRNA_Ecto-sp13_S_contig15731.4228.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: A0A6H5KYK6_9PHAE (Aldo_ket_red domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYK6_9PHAE) HSP 1 Score: 412 bits (1058), Expect = 9.390e-142 Identity = 202/204 (99.02%), Postives = 203/204 (99.51%), Query Frame = 1
Query: 1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKE+DDDT FEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ
Sbjct: 82 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKERDDDTSFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 285
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: A0A836CJ26_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ26_9STRA) HSP 1 Score: 270 bits (691), Expect = 3.200e-87 Identity = 128/204 (62.75%), Postives = 163/204 (79.90%), Query Frame = 1
Query: 1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
LG SDLVVS+ CLGTMTWGEQN+DEEA+EQ ++AF EFG+NFID AEMYPV P+ ETQGRT+IA+ KWLK R +VV+A+KV GR D T++R G+ RV R +I+E+VD SL+RL TDY+DLLQ+HWPDR VP+FG +E Y+ AKE+DDD FE+QL ++E+ +AGKVR IG SN+TP+G+ K +L ERLG PRV S+Q
Sbjct: 23 LGSSDLVVSEVCLGTMTWGEQNTDEEAYEQLSVAFDEFGINFIDTAEMYPVQPRAETQGRTDIAISKWLKDRNREDVVLASKVCGRQDTNTYIRKSGQPPRVRRADIVESVDASLQRLGTDYLDLLQVHWPDRYVPIFG-DESYNYAKERDDDVAFEDQLRGLEEVVKAGKVRHIGVSNETPFGVAKFVELSERLGLPRVCSIQ 225
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: A0A835Z0T2_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T2_9STRA) HSP 1 Score: 264 bits (674), Expect = 3.250e-84 Identity = 127/204 (62.25%), Postives = 158/204 (77.45%), Query Frame = 1
Query: 1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
LG SDLVVS+ CLGTMTWGEQNSDEEA++Q +A EFG+NFID AE+YPVP K ET GRT+ A+ KWLK R ++V+A+KVAGR+ L LR G+ TRV + +IIE+VDKSL+RL TDY+DLLQ+HWPDR VPLFG YD +E+ DD PFEEQL+ ++E+ +AGKVR IG SN+TPYG+ K L E+LG PRV S+Q
Sbjct: 58 LGSSDLVVSEVCLGTMTWGEQNSDEEAYQQLKLAVDEFGINFIDTAELYPVPAKAETSGRTDKAIAKWLKGRKREDIVLASKVAGRAAHLGHLRSSGEPTRVRKADIIESVDKSLQRLGTDYLDLLQVHWPDRYVPLFGGG-IYDYEQERSDDIPFEEQLQALEEVIKAGKVRNIGLSNETPYGVMKFVTLAEQLGLPRVCSIQ 260
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: L1JG80_GUITC (Aldo_ket_red domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JG80_GUITC) HSP 1 Score: 252 bits (643), Expect = 3.250e-80 Identity = 121/204 (59.31%), Postives = 151/204 (74.02%), Query Frame = 1
Query: 1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
LG SDL+VS+ CLGTMTWG+QN++EEA +Q N AF +FGVNFID AE YP+P +PET G T+I +GKW+K R V++ATKV G+S RL W RDDG+GTRV +K ++E+V+KSLKRL TDYIDLLQIHWPDR VPLFG N +YD+ E PFEEQLE M+EL + GK+R G SN+TP+G+ L G + SVQ
Sbjct: 6 LGDSDLIVSEVCLGTMTWGKQNTEEEAIQQLNTAFDDFGVNFIDTAEGYPIPLQPETSGATDIIIGKWMKQRPRDQVILATKVCGKSSRLKWFRDDGQGTRVTKKQVVESVEKSLKRLQTDYIDLLQIHWPDRYVPLFGPN-KYDITLETPA-VPFEEQLEAMNELIQQGKIRHWGLSNETPFGVMAFVSLALEQGMAKPVSVQ 207
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: A0A7S1DYG4_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DYG4_HEMAN) HSP 1 Score: 247 bits (631), Expect = 3.770e-77 Identity = 118/204 (57.84%), Postives = 151/204 (74.02%), Query Frame = 1
Query: 1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
LG SDL+VS+ CLGTMTWG+QNS+E+A +Q + AF ++GVNFID AE YP+P +PETQG T+ +GKW+K R +V+ATK+ G S RL W RDDGKGTRVNRK + E++DKSL+RLDTDY+DL QIHWPDR VPLFG N +YD E+ T FEEQLE + +L + GK+R G SN+TP+G+ L LG P+ S+Q
Sbjct: 85 LGDSDLLVSEVCLGTMTWGKQNSEEQAMKQLDCAFDDYGVNFIDTAEGYPIPLQPETQGDTDRLIGKWMKGRPRDKIVLATKMCGASQRLNWFRDDGKGTRVNRKQVFESLDKSLQRLDTDYVDLFQIHWPDRYVPLFGPN-KYDEKMERAA-TSFEEQLEALADLIKEGKIRHWGLSNETPFGVMAFVSLAMELGLPKPVSIQ 286
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: L1J0D5_GUITC (Aldo_ket_red domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1J0D5_GUITC) HSP 1 Score: 243 bits (620), Expect = 2.530e-76 Identity = 124/206 (60.19%), Postives = 153/206 (74.27%), Query Frame = 1
Query: 1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRD-DGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVP-LFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
LG SDL VS+ CLGTMTWG+QN+ EE EQ N+AF EFGVNFID AEMYP+P K ETQG T+ + KWLK+ R +VV+ATKVAG SDR+TWL DGKG+RV RK I+ +VD+SLKRL+TDYIDLLQIHWPDR + LFGA YD++K + FEEQL DEL R GKVR +G SN++P+G+ L ++L P+V S+Q
Sbjct: 6 LGNSDLKVSRCCLGTMTWGQQNTMEEGVEQLNVAFDEFGVNFIDTAEMYPIPVKAETQGDTDRTIAKWLKTKRREDVVLATKVAGYSDRITWLPGRDGKGSRVTRKEILTSVDESLKRLNTDYIDLLQIHWPDRHMGNLFGAPGTYDISKVYES-VSFEEQLRAFDELIRQGKVRYMGVSNESPFGVMNFHFLSKQLNLPQVVSIQ 210
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: A0A7S2XWE6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWE6_9STRA) HSP 1 Score: 243 bits (620), Expect = 4.450e-76 Identity = 124/207 (59.90%), Postives = 158/207 (76.33%), Query Frame = 1
Query: 1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKS--VARHNVVVATKVAGRSDRLTWLRD-DGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
LG SDL+VS+ CLGTMTWG QN+DEE EQ + F+E G NF D AEMYPVP ETQGRT+ + KW++S + R +V+ATKVAG SDR+TWL +G+G+RV +K II +VD+SLKRL TDYIDLLQIHWPDR VPLFG + Y++++E++ T FEEQLE M E+ +AGKVR IG SN+TPYG+ K QL ++LG PR+ S+Q
Sbjct: 56 LGSSDLMVSEVCLGTMTWGVQNTDEEGAEQMDYYFNECGGNFFDTAEMYPVPTTAETQGRTDNCIRKWMQSRGIDRSKLVLATKVAGASDRITWLPGRNGEGSRVTKKEIITSVDESLKRLGTDYIDLLQIHWPDRYVPLFGTS-GYNISEEREA-TSFEEQLEGMQEVIQAGKVRYIGVSNETPYGVMKFCQLADQLGLPRICSIQ 260
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: A0A7S4DXK6_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DXK6_9EUKA) HSP 1 Score: 242 bits (618), Expect = 1.870e-75 Identity = 118/206 (57.28%), Postives = 152/206 (73.79%), Query Frame = 1
Query: 1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLK--SVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQ 612
LG SDL+VS+ CLGTMTWGEQN+++E EQ AF + G+NF+D AE YP+P K ETQGRT+ + +W+K ++AR VV+ATKV G SD LTW R +G+GT+V+ IIE+VD SL+RL+TDYIDLLQIHWPDR VPLFGAN RY + +E+D PFEEQ+ M +L + GK+R G SN+TPYG M + E+LG P S+Q
Sbjct: 82 LGNSDLMVSEVCLGTMTWGEQNTEDEGVEQLRTAFDDMGINFLDTAEAYPIPLKAETQGRTDRTIARWMKESNIARDKVVLATKVCGNSDGLTWFRKNGEGTKVSYDQIIESVDASLERLNTDYIDLLQIHWPDRYVPLFGAN-RYKIGEERDS-IPFEEQVRAMGDLIKQGKIRYWGLSNETPYGTMMMVKAAEKLGVPPPVSIQ 285
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: B8C7K3_THAPS (Aldo_ket_red domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7K3_THAPS) HSP 1 Score: 234 bits (598), Expect = 2.340e-73 Identity = 120/209 (57.42%), Postives = 154/209 (73.68%), Query Frame = 1
Query: 1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVP-LFGANE--RYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLG--YPRVASVQ 612
LG S+LVVSK C+GTMT+GEQN+ EE EQ N AF E+GVNF+D AEMYPVP K ET G+T+ A+ +LKS R +V++ATKV+GRSDR+ WLR DG T VNRK I+E+VD SL+RL TDYIDLLQIHWPDR LFG + ++ +++++ FEEQL M+EL AGKVR IG SN+TP+G+ M +L + YPR+AS+Q
Sbjct: 6 LGSSELVVSKVCMGTMTFGEQNTLEEGVEQLNRAFDEYGVNFLDTAEMYPVPTKAETAGKTDKAVASFLKSFPRQDVILATKVSGRSDRINWLRTDGSSTIVNRKQILESVDASLERLGTDYIDLLQIHWPDRYTGGLFGQKDFSPRELQQKEEEYVSFEEQLSTMNELVEAGKVRYIGVSNETPFGVCSMVELAKHNPQLYPRIASIQ 214
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Match: A0A7S4EDL0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDL0_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.370e-71 Identity = 115/206 (55.83%), Postives = 151/206 (73.30%), Query Frame = 1
Query: 1 LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHN-VVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKEQDDDTPFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGER-LGYPRVASVQ 612
LG SDLVVS CLGTMTWG+QN+ EE +Q + AF E+G+NF+D AEMYPVP + ETQG+T+ +G WLK R + VV+A+K+ G S+R+TW+R DG+GTRV +I+E V+ SL+RL TDYIDLLQIHWPDR VPLFG+ YD ++E++ PF EQL+ + +L GKVR IG SN+TPYG+ + Q ER PR+ S+Q
Sbjct: 33 LGTSDLVVSDVCLGTMTWGKQNTLEEGVQQLDCAFDEYGLNFLDTAEMYPVPTEAETQGKTDETIGAWLKKRGRRDDVVLASKICGASERITWVRGDGRGTRVTEADIVEGVEGSLRRLGTDYIDLLQIHWPDRYVPLFGSG-TYDASQEREA-VPFVEQLQALKKLVDQGKVRHIGVSNETPYGVCRFIQEHERDASLPRICSIQ 236 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15731.4228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15731.4228.1 >prot_Ecto-sp13_S_contig15731.4228.1 ID=prot_Ecto-sp13_S_contig15731.4228.1|Name=mRNA_Ecto-sp13_S_contig15731.4228.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=204bp LGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPback to top mRNA from alignment at Ecto-sp13_S_contig15731:3..3552+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15731.4228.1 ID=mRNA_Ecto-sp13_S_contig15731.4228.1|Name=mRNA_Ecto-sp13_S_contig15731.4228.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3550bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15731:3..3552+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15731:3..3552+ >mRNA_Ecto-sp13_S_contig15731.4228.1 ID=mRNA_Ecto-sp13_S_contig15731.4228.1|Name=mRNA_Ecto-sp13_S_contig15731.4228.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=612bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15731:3..3552+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |