mRNA_Ecto-sp13_S_contig15719.4216.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15719.4216.1 vs. uniprot
Match: D7FRZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRZ1_ECTSI) HSP 1 Score: 255 bits (652), Expect = 7.640e-79 Identity = 142/234 (60.68%), Postives = 149/234 (63.68%), Query Frame = 2
Query: 200 DYIDGVGRSRGRQSIPMEERFWHRVGRQMPSRNFMTLFRCMKSTFAALVSEL*DTLDVRAPDGGRGPAFHPCERTAMVLYRLGHGAGARATAALFGVCDGWVTSWH-ERVHHEGVREAPT*VPVQAHTKRQDNISAAFQRRTGFSDAVLAMDGSHIPVPCPTPRDMSAYFSYKGFYSVVLLALVDNAGFFRWVISGPPGSAGDARVWNWSRQSKDIAEEQKFPEAQRSRICRNR 898
DYIDGVGRSRGRQSIPMEERFWHRVGR+MPSRNFM LFRCM+ TFAALV EL DTLDVRA DGGRGPAFHPCERTAMVLYRLGHGAGARATAALFGV DGWVTS E + R P + QDNISAAF+RRTGF GPPGSAGDA VW+W+RQSKDIAEEQK PEAQR R R
Sbjct: 5 DYIDGVGRSRGRQSIPMEERFWHRVGREMPSRNFMILFRCMRPTFAALVKELYDTLDVRASDGGRGPAFHPCERTAMVLYRLGHGAGARATAALFGVSDGWVTSCTCEFITRVTARLIPRFLWSWPTRNDQDNISAAFERRTGFR--------------------------------------------------GPPGSAGDAGVWDWARQSKDIAEEQKLPEAQRRHRRRPR 188
BLAST of mRNA_Ecto-sp13_S_contig15719.4216.1 vs. uniprot
Match: A0A6H5JA50_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA50_9PHAE) HSP 1 Score: 179 bits (455), Expect = 3.920e-51 Identity = 98/237 (41.35%), Postives = 127/237 (53.59%), Query Frame = 2
Query: 323 KSTFAALVSEL*DTLDVRAPDGGRGPAFHPCERTAMVLYRLGHGAGARATAALFGVCDGWVTSWHERVHHEGVREAPT*VPVQAHTKRQDNISAAFQRRTGFSDAVLAMDGSHIPVPCPTPRDMSAYFSYKGFYSVVLLALVDNAGFFRWVISGPPGSAGDARVWNWSRQSKDIAEEQKFPEAQRSRICRNRFILGGSAFANSSWLLTPYDNPVTRIQRFFNYKHSQTRFVVEHAFG 1033
KSTF LV L T V + GP PCER A+ L+R+GHG+G RATA+ F + +G V +W V + + Q IS A+++ V +DGSHI +P PT AY++YK FYS++LLA+VDN G FRW SG GS GD+ V ++ K EQ P +R ILG SAFA W+ TPY P +R QR+FN+ HS R VEHA G
Sbjct: 12 KSTFRRLVHALFGTTYVFRVNN-TGPYIDPCERVAVFLFRVGHGSGVRATASHFNMAEGAVVNWTMSVARRIRKRLLCEYVRWPSPEEQSEISTAWEKEKSLRKVVGGIDGSHIKIPAPTEHQQLAYYNYKKFYSIILLAIVDNRGLFRWTCSGCAGSCGDSGVLQHTKFYKAAQREQSKPVDERRIFANGACILGDSAFAEGPWMRTPYTMPSSREQRYFNFMHSSMRMRVEHALG 247
BLAST of mRNA_Ecto-sp13_S_contig15719.4216.1 vs. uniprot
Match: A0A6H5JSG7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG7_9PHAE) HSP 1 Score: 169 bits (429), Expect = 2.390e-46 Identity = 91/219 (41.55%), Postives = 121/219 (55.25%), Query Frame = 2
Query: 386 GGRGPAFHPCERTAMVLYRLGHGAGARATAALFGVCDGWVTSWHERVHHEGVREAPT*VPVQAHTKRQDNISAAFQRRTGFSDAVLAMDGSHIPVPCPTPRDMSAYFSYKGFYSVVLLALVDNAGFFRWVISGPPGSAGDARVWNWSRQSKDIAEEQKFPEAQRSRICRNRFILGGSAFANSSWLLTPYDNPVTRIQRFFNYKHSQTRFVVEHAFGRLK 1042
G RGP F PCER A+ ++RLG + R TA FG+ DG V+ V + + Q ++SAA++ + A+DGSHI + P ++Y++YK FYS+ LLA+VDN G FRW SG PG+ D+ V + + + E+Q P + R ILG SAFA S W+ TP P R +RFFNYKHS RF VEHAFGRLK
Sbjct: 5 GRRGPPFDPCERVAVFMWRLGGDSTVRQTALQFGLSDGTVSQVTLEVARRVDKYLRDECVWWPSPEEQRDMSAAWELEKHLRGVIGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLTDTAFYEMVQEDQAQPVSSRQLFANGACILGDSAFAESPWMRTPIGKPDNRAERFFNYKHSSMRFRVEHAFGRLK 223
BLAST of mRNA_Ecto-sp13_S_contig15719.4216.1 vs. uniprot
Match: A0A015JYP1_RHIIW (DDE Tnp4 domain-containing protein n=4 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015JYP1_RHIIW) HSP 1 Score: 116 bits (291), Expect = 1.040e-25 Identity = 94/304 (30.92%), Postives = 144/304 (47.37%), Query Frame = 2
Query: 140 SAREQDLLAYLGLFDRHDVQDYIDGVGRSRGRQSIPMEERFWHRVGRQMPSRNFMTLFRCMKSTFAALVSEL*DTLDVRAPDGGRGPAFHPCERTAMVLYRLGHGAGARATAALFGVCDGWVTSWHERVHHE-GVREAPT*VPVQAHTKRQDNISAAFQRRTGFSDAVLAMDGSHIPVPCPTPRDMSAYFSYKGFYSVVLLALVDNAGFFRWVISGPPGSAGDARVWNWSRQSKDIAEEQKFPEAQRSRICRNRFILGGSAFANSSWLLTPY-DNP-VTRIQRFFNYKHSQTRFVVEHAFGRLK 1042
S DLL Y D + + + V R R +++ + + F FR K+TF L +E+ L R G P ++ ++ L+ L G R LF + + + V + + + + NI+ F+R+ G A+ A+DGSHIP+ P M Y++ KGFYS+VL A+VD+ G F + G PGS D+R+++ S ++ S I N +ILG + + +WLLTPY DN +T+IQ ++N KHSQTR VE AFG+LK
Sbjct: 29 SDENNDLLFYYECIDVIERNNSLRAVHRQARRARSFC---WFNNICSSWENMEFKRHFRITKTTFEWLCTEIAPILLQRNNSRG-APRLPIKQKVSVTLWFLATGQSYRTLGQLFALGETTICFIIRSVLYAIKCHFLSSKIRFPNNYTEFSNIAKKFKRKAGIPYAIGAIDGSHIPIKAPKEYPMD-YYNRKGFYSIVLQAVVDSYGRFIDIFVGYPGSTHDSRIFHNSPLYYMLSSSS-------SVIPSNSYILGDAGYPCQNWLLTPYRDNGRLTQIQTYYNTKHSQTRISVEQAFGKLK 320
BLAST of mRNA_Ecto-sp13_S_contig15719.4216.1 vs. uniprot
Match: UPI0014255786 (protein ALP1-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014255786) HSP 1 Score: 115 bits (288), Expect = 3.260e-25 Identity = 101/310 (32.58%), Postives = 142/310 (45.81%), Query Frame = 2
Query: 134 LESAREQDLLAYLGLFDRHDVQDYIDGVGRS-RGRQSIPMEERFWHRVGRQMPSRNFMTLFRCMKSTFAALVSEL*DTLDVRAPDGGRGPAFHPCERTAMVLYRLGHGAGARATAALFGVCDGWV-TSWHERVHHEGVREAPT*VPVQAHTKRQDNISAAFQRRTGFSDAVLAMDGSHIPVPCPTPRDMSAYFSYKGFYSVVLLALVDNAGFFRWVISGPPGSAGDARVWNWSRQSKDIAEEQKF-PEAQRSRICRN--RFILGGSAFANSSWLLTPYDNPVT--RIQRFFNYKHSQTRFVVEHAFGRLK 1042
L A EQ L + +F H QD R R ++S+ +W + ++F+ FR K TF +V EL ++ + GP F R AM LYRL G TA FG T +HE P + + + NI F+ + GF V A+DG+HI + P + Y++ K +YS+VL +VD G F G PGS DARV++ S + I + + F P + + N ILG A+ + L+ P+ N R Q FNYK SQ R +VEHAFGRLK
Sbjct: 59 LRYAEEQRELGQI-MFVLHTSQDATTARRRLWRKKKSV----HWWETIVPLYSDKDFIENFRLNKETFKYVVDELRPFIE--KSENNNGPTFSTEWRVAMTLYRLSSGIPFNRTANQFGSAKSTACTIYHEVCEAIEAVLMPKFITFPTGQELKKNIEK-FKMKGGFPQVVGAIDGTHIAIIAPRDQPQD-YYNRKEYYSIVLQGVVDANGMFIDTFCGMPGSVNDARVFHISNFGEAIKDGKIFKPYIEETLNGTNIPPLILGDGAYPLLTNLMRPFPNRPNKPREQTRFNYKLSQCRVIVEHAFGRLK 359
BLAST of mRNA_Ecto-sp13_S_contig15719.4216.1 vs. uniprot
Match: A0A2Z6RQ57_9GLOM (DDE Tnp4 domain-containing protein n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6RQ57_9GLOM) HSP 1 Score: 110 bits (275), Expect = 9.500e-24 Identity = 89/275 (32.36%), Postives = 133/275 (48.36%), Query Frame = 2
Query: 233 RQSIPMEERFW-HRVGRQMPSRNFMTLFRCMKSTFAALVSEL*DTLDVRAPDGG--RGPAFHPCERTAMVLYRLGHGAGARATAALFGVCDGWVTSWHERVHHEGVREAPT*VPVQAHTKRQDNISAAFQRRTGFSDAVLAMDGSHIPVPCPTPRDMSAYFSYKGFYSVVLLALVDNAGFFRWVISGPPGSAGDARVWNWSRQSKDIAEEQKFPEAQRSRICRNRFILGGSAFANSSWLLTPY-DNP-VTRIQRFFNYKHSQTRFVVEHAFGRLK 1042
RQ+ +W + + + + F FR K+TF L +EL L R G R P H + ++ L+ L G R LF + + + V + ++ H + F+R+ G AV A+DGSHIP+ P M Y++ KGFYS+VL A++D+ G F + G PG D+RV++ S + S I N +ILG + + +W+LTPY DN +T+IQ ++N KHSQTR VE AFG+LK
Sbjct: 49 RQTRRARSAYWFNNICNRWENVEFRCHFRITKTTFEWLCTELAPLLLQRNNSRGAPRTPIKH---KVSLTLWFLATGQSYRILGQLFALGESTICYIIRSVLYA----------IKCHFL---SSKIQFKRKAGIPYAVGAIDGSHIPIKAPKQYSMD-YYNRKGFYSIVLQAVIDSYGKFIDIFVGYPGFTYDSRVFHNSPLYHMLNSSSS------SVIPTNAYILGNAGYPCYNWILTPYRDNGRLTQIQTYYNIKHSQTRVGVEQAFGKLK 300
BLAST of mRNA_Ecto-sp13_S_contig15719.4216.1 vs. uniprot
Match: A0A6J2UM55_CHACN (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2UM55_CHACN) HSP 1 Score: 108 bits (269), Expect = 2.880e-23 Identity = 84/220 (38.18%), Postives = 119/220 (54.09%), Query Frame = 2
Query: 416 ERTAMVLYRLGHGAGARATAALFGV-----CDGWVTSWHERVHHEGVREAPT*VPVQA-HTKRQDNISAAFQRRTGFSDAVLAMDGSHIPVPCPTPRDMSAYFSYKGFYSVVLLALVDNAGFFRWVISGPPGSAGDARVWNWSRQSKDIAEE-QKFPEAQRSRICRN--RFILGGSAFANSSWLLTPY-DNP-VTRIQRFFNYKHSQTRFVVEHAFGRLK 1042
+R A+ L++L A R + LFGV CD S V E +Q +T++ ++ F+ R G V A+DGSHIP+ P + YF+ KG+YS+VL A+VD G F V +G PGS DARV S D+AE Q F + RS ++ +ILG +A+ +SWL+ P+ DN +T+ Q FN+K S+ R VVE+ FGRLK
Sbjct: 32 KRVAVALWKLATNAEYRTVSHLFGVGISTACDCVKESC------SSVEEILLPETIQMPNTEKLKEMALYFEHRWGLPQCVGAIDGSHIPLVAPQEYH-TEYFNRKGWYSIVLQAVVDGRGLFWNVYTGQPGSLHDARVLRLSALW-DLAERGQLFSQQLRSIGGQDIGHYILGDAAYPLASWLMKPFPDNGHLTQQQEVFNHKTSKARVVVENTFGRLK 243
BLAST of mRNA_Ecto-sp13_S_contig15719.4216.1 vs. uniprot
Match: UPI0008115D3B (uncharacterized protein LOC108360410 n=1 Tax=Rhagoletis zephyria TaxID=28612 RepID=UPI0008115D3B) HSP 1 Score: 107 bits (266), Expect = 1.360e-22 Identity = 99/314 (31.53%), Postives = 145/314 (46.18%), Query Frame = 2
Query: 128 LLLESAREQDLLAYLGLFDRHDVQDYIDGVGRSRGRQSIPMEERFWHRVGRQMPSRNFMTLFRCMKSTFAALVSEL*DTLDVRAPDGGRGPAFHPCERTAMVLYRLGHGAGARATAALFGVCDGWVTS--WH--ERVHHEGVREAPT*VPVQAHTKRQDNISAAFQRRTGFSDAVLAMDGSHIPVPCPTPRDMSAYFSYKGFYSVVLLALVDNAGFFRWVISGPPGSAGDARVWNWSRQSKDIAEEQKFPEAQRSRICRNRF---ILGGSAFANSSWLLTPY--DNPVTRIQRFFNYKHSQTRFVVEHAFGRLK 1042
++L+ R Q LL Y GL R+ Q + + R + FW F T FR +++F L L ++ D A +R A+ L+ LG R + LFGV V + W E V + +P T + + F R GF + A+DG HI V P P D + Y +YKG+YS+VLLA+VD F +V G PG D++++N S K + EE + + + I + I+G SAF S+ L+ PY +T Q+ +NYK S+ R VVE+AFG LK
Sbjct: 13 IILQHLRRQQLLLY-GLLQRNATQRSLWKLNR---------QSSFWEVNCNCNDDHFFKTHFRMNRTSFETLCGFL---KNLHKADTNWRNAIPLQKRVAIALFTLGSSGEYRVVSELFGVGISTVCTILWEFCEEVWQALSAQYIKKLPPTPQTLK--DCVDGFDR-LGFPQCLGAIDGCHIEVR-PNPADATDYHNYKGWYSIVLLAVVDYRYRFLYVNIGAPGRCNDSQIYNASLM-KRVMEENELLKVSKKEIGGVQMPICIIGDSAFRFSTSLMKPYAFSMALTETQKLYNYKLSKCRRVVENAFGHLK 308
BLAST of mRNA_Ecto-sp13_S_contig15719.4216.1 vs. uniprot
Match: UPI00189627A2 (uncharacterized protein LOC119384138 n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI00189627A2) HSP 1 Score: 106 bits (265), Expect = 3.490e-22 Identity = 89/264 (33.71%), Postives = 127/264 (48.11%), Query Frame = 2
Query: 296 NFMTLFRCMKSTFAALVSEL*DTLDVRAPDGGRGPAFHPCERTAMVLYRLGHGAGARATAALFGV------------CDGWVTSWHERVHHEGVREAPT*VPVQAHTKRQDNISAAFQRRTGFSDAVLAMDGSHIPVPCPTPRDMSAYFSYKGFYSVVLLALVDNAGFFRWVISGPPGSAGDARVWNWSRQSKDIAEEQKF--PEAQRSRICRNRFILGGSAFANSSWLLTPY-DNPVTRIQRFFNYKHSQTRFVVEHAFGRLK 1042
NF FR ++TF LV T++ + + A +R A+ LY+L A R A LF + C+ V S ER VR PT ++ H K FQ GF V A+DG H PV P S Y++YKG+YSV+LLALVD+ FR++ G PG DA V++ S S+ + E F P+ + +L AF + L+ P+ + Q+ FNY+ S++R +VE+AFGRLK
Sbjct: 82 NFRQSFRVSQTTFKYLVDVCRPTMERQTTN--MREAIPVNKRVAVALYKLCSSAEDRTIANLFDMGRSTVNIIYREFCEAVVDSLEER----WVR-MPTPSEMEDHIKE-------FQLTLGFPQGVGALDGCHFPVS-PPKEYASDYYNYKGWYSVILLALVDHNYMFRFINVGSPGRCHDAHVYHQSSLSR-LIEGPTFRTPKTTLGNVAVPPLVLCDQAFPLTPNLMKPFASTSCSEEQKHFNYQLSKSRRIVENAFGRLK 329
BLAST of mRNA_Ecto-sp13_S_contig15719.4216.1 vs. uniprot
Match: UPI001ED86C66 (putative nuclease HARBI1 n=3 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED86C66) HSP 1 Score: 105 bits (263), Expect = 4.600e-22 Identity = 82/268 (30.60%), Postives = 124/268 (46.27%), Query Frame = 2
Query: 260 FWHRVGRQMPSRNFMTLFRCMKSTFAALVSEL*DTLDVRAPDGGRGPAFHPCERTAMVLYRLGHGAGARATAALFGVCDGWVTSWHE-------RVHHEGVREAPT*VPVQAHTKRQDNISAAFQRRTGFSDAVLAMDGSHIPVPCPTPRDMSAYFSYKGFYSVVLLALVDNAGFFRWVISGPPGSAGDARVWNWSRQSKDIAEEQKFPEAQRSRICRNRFILGGSAFANSSWLLTPYDNPVTRIQRFFNYKHSQTRFVVEHAFGRLK 1042
FW R P F FR + TF+ + +L +TL D A ++ A+ LY L G+ FGV V++ E R +H +R T ++A T Q F+ R F + A+DG HIP+ P+ + Y++YKG++S++LLA+VD+A F +V G PG DA V S + + + I + ++G AF +L P+ P + FNY+ S+ R VVE+AFGRLK
Sbjct: 57 FWERDVPAWPEDVFQKTFRLCRETFSIICRDLGETL--ARQDTQMREAIPVRKKVAIALYFLKSGSDYGVVGMTFGVGRSTVSAIVEEFCAAVRRQYHPRIRFPATEEDMRA-TANQ------FEYRWDFPGVIGAVDGCHIPIKTPS-HEGGDYYNYKGWHSIILLAVVDSAYRFTYVNVGYPGRVNDAGVLRASALWRKLTSGE---------IPNHYHLVGDGAFPLGQHMLKPFQQPRRPCEELFNYRLSRARMVVENAFGRLK 305 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15719.4216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15719.4216.1 >prot_Ecto-sp13_S_contig15719.4216.1 ID=prot_Ecto-sp13_S_contig15719.4216.1|Name=mRNA_Ecto-sp13_S_contig15719.4216.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=101bp MDHGEMLAVLMSAVLAGMEQIHLILLLESAREQDLLAYLGLFDRHDVQDYback to top mRNA from alignment at Ecto-sp13_S_contig15719:367..3907+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15719.4216.1 ID=mRNA_Ecto-sp13_S_contig15719.4216.1|Name=mRNA_Ecto-sp13_S_contig15719.4216.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3541bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15719:367..3907+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15719:367..3907+ >mRNA_Ecto-sp13_S_contig15719.4216.1 ID=mRNA_Ecto-sp13_S_contig15719.4216.1|Name=mRNA_Ecto-sp13_S_contig15719.4216.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=303bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15719:367..3907+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |