prot_Ecto-sp13_S_contig15716.4214.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15716.4214.1
Unique Nameprot_Ecto-sp13_S_contig15716.4214.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length238
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15716.4214.1 vs. uniprot
Match: D7G1W2_ECTSI (Similar to F59G1.4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W2_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 2.390e-101
Identity = 157/170 (92.35%), Postives = 162/170 (95.29%), Query Frame = 0 
Query:    1 MIRSFEDIDEAVAEYLERRRFANTLECFRSEKRHRTLLRDRLGKSDETLGGSEGGRRRRSLCGDDGRDFGHQTTSTGSVALLKAFDDGDMSAFLSAWAAFIPKILRRGTPSSLAREVRVAEFLACVHCAVLPFRAAALAEAAGPREASVGCAKSMSSFRRYLDRAQDVPR 170
            MI+SFEDIDEAVAEYLERRRFANTLECFRSE RHRTLLRDRLGKSDETL GSEGGRRRRS CGD+GRD GHQTTSTGSVAL KAFDDGD+SAFLSAWAAFIP ILRRGTPSSLARE+RVAEFLACVHCAVLPFRA ALA+AAGPREASV CAKSMSSFRRYLDRAQDVPR
Sbjct:    1 MIQSFEDIDEAVAEYLERRRFANTLECFRSEIRHRTLLRDRLGKSDETLEGSEGGRRRRSGCGDEGRDRGHQTTSTGSVALFKAFDDGDLSAFLSAWAAFIPNILRRGTPSSLARELRVAEFLACVHCAVLPFRATALAKAAGPREASVACAKSMSSFRRYLDRAQDVPR 170
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BLAST of mRNA_Ecto-sp13_S_contig15716.4214.1 vs. uniprot
Match: A0A6H5KFS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS9_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 3.050e-90
Identity = 171/265 (64.53%), Postives = 177/265 (66.79%), Query Frame = 0 
Query:   37 LLRDRLGKSDETLGGSEGGRRRRSLCGDDGRDFGHQTTSTGSVALLKAFDDGDMSAFLSAWAAFIPKILRRGTPSSLAREVRVAEFLACVHCAVLPFRAAALAEAAGPREASVGCAK--------------------------------------------SMSSFRRYLDRAQDVPR-------------------------------ASLKSRIENLIDAVNLWRRSDPLLVRLLLRPVEGATHAGENERGPRFPSWDDFNTT 226
            L  DRLGKSDETL G EGGRRR SLCGDDGRD GHQTTSTGSVAL KAFDDGDMSAFLSAWAAFIPK LRRGTPSSLAREVRV EFLACVHCAVLPFRA ALA+AAGPREASV CAK                                            SMSSFRRYLDRAQDVPR                               ASLK++IENL+DAVNLWRRSDPLLVRLLLRPVEGATHA +NERGPRFPS DDF+TT
Sbjct:    3 LSLDRLGKSDETLEGFEGGRRR-SLCGDDGRDRGHQTTSTGSVALFKAFDDGDMSAFLSAWAAFIPKTLRRGTPSSLAREVRVVEFLACVHCAVLPFRATALAKAAGPREASVACAKVMVFLTCKRHHKEPLVRCHRGPRMFSLFCFNAATYCSMFGLDSQSMSSFRRYLDRAQDVPRVPDLSGYYALPHVPDPSVHPSFEALFEETWAASLKTKIENLMDAVNLWRRSDPLLVRLLLRPVEGATHAADNERGPRFPSCDDFSTT 266
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BLAST of mRNA_Ecto-sp13_S_contig15716.4214.1 vs. uniprot
Match: D7G1W3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W3_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 2.690e-17
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0 
Query:  181 IDAVNLWRRSDPLLVRLLLRPVEGATHAGENERGPRFPSWDDFNTT 226
            +DAVNLWRRSDPLLVRLLLRPVEGATHA ENER PR PSWDDF+TT
Sbjct:    1 MDAVNLWRRSDPLLVRLLLRPVEGATHAAENERRPRIPSWDDFSTT 46
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15716.4214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1W2_ECTSI2.390e-10192.35Similar to F59G1.4 n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5KFS9_9PHAE3.050e-9064.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1W3_ECTSI2.690e-1789.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15716contigEcto-sp13_S_contig15716:496..3945 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15716.4214.1mRNA_Ecto-sp13_S_contig15716.4214.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15716 210..4093 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15716.4214.1 ID=prot_Ecto-sp13_S_contig15716.4214.1|Name=mRNA_Ecto-sp13_S_contig15716.4214.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=238bp
MIRSFEDIDEAVAEYLERRRFANTLECFRSEKRHRTLLRDRLGKSDETLG
GSEGGRRRRSLCGDDGRDFGHQTTSTGSVALLKAFDDGDMSAFLSAWAAF
IPKILRRGTPSSLAREVRVAEFLACVHCAVLPFRAAALAEAAGPREASVG
CAKSMSSFRRYLDRAQDVPRASLKSRIENLIDAVNLWRRSDPLLVRLLLR
PVEGATHAGENERGPRFPSWDDFNTTRQRGVPTTDGG*
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