prot_Ecto-sp13_S_contig15610.4172.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15610.4172.1
Unique Nameprot_Ecto-sp13_S_contig15610.4172.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length77
Homology
BLAST of mRNA_Ecto-sp13_S_contig15610.4172.1 vs. uniprot
Match: D7FUE2_ECTSI (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE2_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 2.640e-44
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNR 77
            MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNR
Sbjct:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNR 77          
BLAST of mRNA_Ecto-sp13_S_contig15610.4172.1 vs. uniprot
Match: A0A835YX65_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX65_9STRA)

HSP 1 Score: 125 bits (313), Expect = 7.190e-32
Identity = 64/77 (83.12%), Postives = 71/77 (92.21%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNR 77
            MP IEVGTVGGGTSLPAQAACLDV+GCRGA+QAP  PG NA+Q+A+V+A A LAGELSL+AALASNQLVRAHMQHNR
Sbjct:  485 MPCIEVGTVGGGTSLPAQAACLDVIGCRGASQAPDAPGANARQLAQVIAAAVLAGELSLMAALASNQLVRAHMQHNR 561          
BLAST of mRNA_Ecto-sp13_S_contig15610.4172.1 vs. uniprot
Match: A0A7S2FDH1_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FDH1_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.650e-27
Identity = 55/77 (71.43%), Postives = 70/77 (90.91%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNR 77
            MPSIEVGTVGGGTSLPAQA CLD++G RGA++AP  PG+NAQ++ ++VA A +AGELSL++ALA+N+LV+AHMQHNR
Sbjct:  370 MPSIEVGTVGGGTSLPAQAQCLDIMGVRGASRAPKNPGDNAQKLGRMVAAAVMAGELSLLSALAANELVKAHMQHNR 446          
BLAST of mRNA_Ecto-sp13_S_contig15610.4172.1 vs. uniprot
Match: A0A7S0ST55_9STRA (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0ST55_9STRA)

HSP 1 Score: 105 bits (262), Expect = 8.420e-27
Identity = 54/78 (69.23%), Postives = 68/78 (87.18%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAP-GRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNR 77
            MPSIEVGTVGGGT LPAQAACLD++  RGA++ P  +PG+NA+++A+V+  A LAGELSL+AALA+N LVR+HMQHNR
Sbjct:   87 MPSIEVGTVGGGTHLPAQAACLDILDVRGASKGPHSQPGDNARKLAQVIGAAVLAGELSLIAALAANHLVRSHMQHNR 164          
BLAST of mRNA_Ecto-sp13_S_contig15610.4172.1 vs. uniprot
Match: A0A1E7FDJ4_9STRA (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDJ4_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.070e-26
Identity = 56/77 (72.73%), Postives = 65/77 (84.42%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNR 77
            MPSIEVGTVGGGTSLPAQAACL+ +GCRG    PG   +NA+++A VVA ATLAGELSL+AALA+N LV+AHM HNR
Sbjct:  141 MPSIEVGTVGGGTSLPAQAACLEAIGCRGGASTPG---DNARKLATVVAAATLAGELSLLAALAANTLVQAHMVHNR 214          
BLAST of mRNA_Ecto-sp13_S_contig15610.4172.1 vs. uniprot
Match: A0A7S1Y0Q7_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0Q7_9STRA)

HSP 1 Score: 108 bits (269), Expect = 4.950e-26
Identity = 56/77 (72.73%), Postives = 66/77 (85.71%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNR 77
            MPS+EVGTVGGGTSLPAQ ACL+V+   GA++AP  PG NAQ ++K +AGA LAGE+SL+AALASNQLVRAHM HNR
Sbjct:  366 MPSLEVGTVGGGTSLPAQRACLEVMNVAGASRAPKAPGTNAQALSKAIAGAVLAGEMSLMAALASNQLVRAHMIHNR 442          
BLAST of mRNA_Ecto-sp13_S_contig15610.4172.1 vs. uniprot
Match: A0A7S1CUP3_9STRA (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CUP3_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.180e-25
Identity = 54/77 (70.13%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNR 77
            MPSIEVGTVGGGT LPAQAACL  +G +G  +    PG+NA+Q+A VVA AT+AGELSL+AALASN LV AHM HNR
Sbjct:   23 MPSIEVGTVGGGTGLPAQAACLKAIGVKGGGE---NPGDNAKQLAHVVAAATMAGELSLMAALASNSLVAAHMTHNR 96          
BLAST of mRNA_Ecto-sp13_S_contig15610.4172.1 vs. uniprot
Match: A0A812U1Q8_SYMMI (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U1Q8_SYMMI)

HSP 1 Score: 97.8 bits (242), Expect = 7.270e-24
Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNR 77
            MPSIEVGTVGGGT LPAQ+ CLD+ G RGA++     G+NA+Q+A++V  + LAGELSL+AALA+N LVR+HMQHNR
Sbjct:   87 MPSIEVGTVGGGTHLPAQSGCLDICGVRGASRVAA--GDNARQLAQIVGASVLAGELSLMAALAANHLVRSHMQHNR 161          
BLAST of mRNA_Ecto-sp13_S_contig15610.4172.1 vs. uniprot
Match: A0A7S4ALR6_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALR6_9STRA)

HSP 1 Score: 102 bits (255), Expect = 8.460e-24
Identity = 55/77 (71.43%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNR 77
            MPSIEVGTVGGGTSLPAQAACL+ +GC+G    PG    NAQ++A VVA AT+AGELSL+AALA+N LV+AHM HNR
Sbjct:  555 MPSIEVGTVGGGTSLPAQAACLEAIGCKGGGSTPGA---NAQKLATVVAAATMAGELSLLAALAANTLVQAHMVHNR 628          
BLAST of mRNA_Ecto-sp13_S_contig15610.4172.1 vs. uniprot
Match: A0A7S3L823_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L823_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.600e-23
Identity = 56/77 (72.73%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAGATLAGELSLVAALASNQLVRAHMQHNR 77
            MPSIEVGTVGGGT L AQAACL++VGCRG       PG NA+++A VVA ATLAGELSL+AALA+N LV+AHMQHNR
Sbjct:  588 MPSIEVGTVGGGTRLAAQAACLELVGCRGGHST--EPGANARKLATVVASATLAGELSLLAALAANTLVQAHMQHNR 662          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15610.4172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUE2_ECTSI2.640e-44100.00Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
A0A835YX65_9STRA7.190e-3283.123-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7S2FDH1_9STRA1.650e-2771.433-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7S0ST55_9STRA8.420e-2769.23Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
A0A1E7FDJ4_9STRA2.070e-2672.73Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
A0A7S1Y0Q7_9STRA4.950e-2672.733-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7S1CUP3_9STRA1.180e-2570.13Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
A0A812U1Q8_SYMMI7.270e-2466.23Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
A0A7S4ALR6_9STRA8.460e-2471.433-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7S3L823_9STRA1.600e-2372.733-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002202Hydroxymethylglutaryl-CoA reductase, class I/IIPFAMPF00368HMG-CoA_redcoord: 1..77
e-value: 5.7E-26
score: 91.4
IPR002202Hydroxymethylglutaryl-CoA reductase, class I/IIPANTHERPTHR105723-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASEcoord: 1..77
IPR002202Hydroxymethylglutaryl-CoA reductase, class I/IIPROSITEPS50065HMG_COA_REDUCTASE_4coord: 1..77
score: 23.144
IPR023074Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamilyGENE3D3.90.770.10coord: 1..77
e-value: 1.9E-29
score: 104.7
NoneNo IPR availablePANTHERPTHR10572:SF23-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASEcoord: 1..77
IPR023076Hydroxymethylglutaryl-CoA reductase, class I/II, conserved sitePROSITEPS00318HMG_COA_REDUCTASE_2coord: 6..13
IPR023076Hydroxymethylglutaryl-CoA reductase, class I/II, conserved sitePROSITEPS01192HMG_COA_REDUCTASE_3coord: 62..75
IPR009029Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamilySUPERFAMILY56542Substrate-binding domain of HMG-CoA reductasecoord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15610contigEcto-sp13_S_contig15610:3535..4118 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15610.4172.1mRNA_Ecto-sp13_S_contig15610.4172.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15610 3535..4118 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15610.4172.1 ID=prot_Ecto-sp13_S_contig15610.4172.1|Name=mRNA_Ecto-sp13_S_contig15610.4172.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=77bp
MPSIEVGTVGGGTSLPAQAACLDVVGCRGATQAPGRPGENAQQMAKVVAG
ATLAGELSLVAALASNQLVRAHMQHNR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002202HMG_CoA_Rdtase
IPR023074HMG_CoA_Rdtase_cat_sf
IPR023076HMG_CoA_Rdtase_CS
IPR009029HMG_CoA_Rdtase_sub-bd_dom_sf