mRNA_Ecto-sp13_S_contig15591.4158.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15591.4158.1 vs. uniprot
Match: D7FTU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU0_ECTSI) HSP 1 Score: 585 bits (1507), Expect = 4.440e-206 Identity = 315/372 (84.68%), Postives = 330/372 (88.71%), Query Frame = 1
Query: 436 MTFVYPVGIPFALGWWLFRHRVDLRADEVGRRANSRITPAADLWGPYRPERYYYEVIECFRRIALTGFAVFIYPDSSAQIAIVLLLAVVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERNQSQGVFAVVVVVAHACMVVVVLAQGLLIFMGWEGKTEKNERQTVFPAPAEGRASVAADWSFIGSQGGLRGNEKGG---RXXXXXXXXXGSGGEEVSTHNPLYAESNNDGXXXXXXXFGHPRRRHAGAGREDNGQGRVSVGGNAENADNGREV-----APPAAKESFFPVSPSGPRRQMPEQRATYMPDSSASVVSRRSNPTCETHEGHELNVSEDFSVVLSEANPAGAAGADGFVTI 1527
MTFVYPVGIPFALGWWLFRHRVDLRADEVGRR+NSRITPAADLWGPYRPERYYYEVIECFRRIALTGFAVFIYPDSSAQIAIVLLLAVVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDE +QSQGVFAVVVVVAHACMV+VVL QGLLIFMGWEGKT+KNERQTVFPAPAE RAS+A DWSF+GSQGGL GNEK G XXXXXX G GGEEVSTHNPLYAESNNDG FG+PRRRHAGAGREDNG VS GG+AENAD G EV A PAAKESFFPVSPSGPRRQMPEQ+AT+MP SSA+VV+RRSNPT EGHELNVSED+SVVLS+A+ AG A ADGF TI
Sbjct: 1 MTFVYPVGIPFALGWWLFRHRVDLRADEVGRRSNSRITPAADLWGPYRPERYYYEVIECFRRIALTGFAVFIYPDSSAQIAIVLLLAVVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDEGDQSQGVFAVVVVVAHACMVLVVLGQGLLIFMGWEGKTDKNERQTVFPAPAESRASLATDWSFLGSQGGLLGNEKDGGXXXXXXXXXYGEGRGGEEVSTHNPLYAESNNDGGGRDGGGFGYPRRRHAGAGREDNGHAGVSAGGDAENADEGEEVKGEEVAAPAAKESFFPVSPSGPRRQMPEQQATFMPGSSAAVVARRSNPTGGAQEGHELNVSEDYSVVLSDADFAGTAAADGFSTI 372
BLAST of mRNA_Ecto-sp13_S_contig15591.4158.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 343 bits (879), Expect = 9.180e-101 Identity = 166/231 (71.86%), Postives = 197/231 (85.28%), Query Frame = 1
Query: 250 IQNRHLSVALLLVFVVYPTVSHTILDTFVCDTLDDGQSYLRADYSLDCDSPIHQRFKIYAALMTFVYPVGIPFALGWWLFRHRVDLRADEVGRRANSRITPAADLWGPYRPERYYYEVIECFRRIALTGFAVFIYPDSSAQIAIVLLLAVVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERNQSQGVFAVVVVVAHACMVVVVLAQGLLIFMGWEG 942
+Q RHLSV L ++FV+Y VS+TI +TFVCDTLDDG SYLRADYSL CD+P+H +++YA L VYPVGIP GWWLF++R +L+ ++ R + + + PAADLW PY+P YYYEV+ECFRRIALTGFAVFIYPDSSAQ+AIVLLLA VFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDER+QSQ VF+ V+V+AH M +VV+AQGLLIF+GW+G
Sbjct: 812 VQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQED--RESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLLIFVGWDG 1040
BLAST of mRNA_Ecto-sp13_S_contig15591.4158.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 340 bits (871), Expect = 1.060e-99 Identity = 165/231 (71.43%), Postives = 195/231 (84.42%), Query Frame = 1
Query: 250 IQNRHLSVALLLVFVVYPTVSHTILDTFVCDTLDDGQSYLRADYSLDCDSPIHQRFKIYAALMTFVYPVGIPFALGWWLFRHRVDLRADEVGRRANSRITPAADLWGPYRPERYYYEVIECFRRIALTGFAVFIYPDSSAQIAIVLLLAVVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERNQSQGVFAVVVVVAHACMVVVVLAQGLLIFMGWEG 942
+Q RHLSV L ++FV+Y VS+TI +TFVCDTLDDG SYLRADYSL CD+P+H +++YA L VYPVGIP GWWLF++R +L+ ++ R + + PAADLW PY+P YYYEV+ECFRRIALTGFAVFIYPDSSAQ+AIVLLLA VFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDER+QSQ VF+ V+V+AH M +VV+ QGLLIF+GW+G
Sbjct: 793 VQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQED--REGQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLLIFVGWDG 1021
BLAST of mRNA_Ecto-sp13_S_contig15591.4158.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 339 bits (870), Expect = 1.260e-99 Identity = 172/265 (64.91%), Postives = 205/265 (77.36%), Query Frame = 1
Query: 247 VIQNRHLSVALLLVFVVYPTVSHTILDTFVCDTLDDGQSYLRADYSLDCDSPIHQRFKIYAALMTFVYPVGIPFALGWWLFRHRVDLRADEVGRRANSRITPAADLWGPYRPERYYYEVIECFRRIALTGFAVFIYPDSSAQIAIVLLLAVVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERNQSQGVFAVVVVVAHACMVVVVLAQGLLIFMGWEGKTEKNERQTVFPAPAEGRASVAADWSFIGSQGG 1041
V+++RHLSVAL ++FV+Y TVS+TI +TFVCD LDDG SYLR+DYSL CD+ H +++YA LM VYPVGIP GWWLF+HR +L+ + GR + + PAADLW PY+P YYYEV+ECFRRIALTGFAVFIYPDSSAQ+AIVLLLA+VFMVVSE LSPFARPVEMWLYR GHYVVFASMYLALLLRVDVSDERNQSQ VF+ V+V+AHA M++VV+ QGLLIF GW E G + D +F+ +GG
Sbjct: 805 VVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQE--GRERRAVLKPAADLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGLLIFAGWGDLVE-----------TPGALANLDDTAFVSKRGG 1056
BLAST of mRNA_Ecto-sp13_S_contig15591.4158.1 vs. uniprot
Match: A0A6H5L0E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0E1_9PHAE) HSP 1 Score: 316 bits (810), Expect = 3.190e-93 Identity = 164/269 (60.97%), Postives = 194/269 (72.12%), Query Frame = 1
Query: 247 VIQNRHLSVALLLVFVVYPTVSHTILDTFVCDTLDDGQSYLRADYSLDCDSPIHQRFKIYAALMTFVYPVGIPFALGWWLFRHRVDLRADEVGRRANSRITPAADLWGPYRPERYYYE---------------------------------------VIECFRRIALTGFAVFIYPDSSAQIAIVLLLAVVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERNQSQGVFAVVVVVAHACMVVVVLAQGLLIFMGW 936
V+++RHLSVAL ++FV+Y TVS+TI +TFVCD LDDG SYLRADYSL C++ H +++YA LM VYPVGIP GWWLF+HR +L+ + GR + + PAADLW PY+P YYYE V+ECFRRIALTGFAVFIYPDSSAQ+AIVLLLA+VFMVVSE LSPFARP+EMWLYR GHYVVFASMYLALLLRVDVSDE NQSQ VF+ V+V+AHA M++VV+ QGLLIF GW
Sbjct: 11 VVKHRHLSVALFVMFVIYATVSYTIFETFVCDPLDDGISYLRADYSLTCETETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQE--GRERRAALKPAADLWEPYKPSTYYYEAAQPPPYLDKLPRRLSSQCLPCPPASADMPPSATPTLEKVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPIEMWLYRTGHYVVFASMYLALLLRVDVSDENNQSQEVFSGVLVIAHAAMLLVVVLQGLLIFAGW 277
BLAST of mRNA_Ecto-sp13_S_contig15591.4158.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE) HSP 1 Score: 237 bits (605), Expect = 3.770e-69 Identity = 118/223 (52.91%), Postives = 153/223 (68.61%), Query Frame = 1
Query: 256 NRHLSVALLLVFVVYPTVSHTILDTFVCDTLDDGQSYLRADYSLDCDSPIHQRFKIYAALMTFVYPVGIPFALGWWLFRHRVDLRADEVGRRAN-SRITPAADLWGPYRPERYYYEVIECFRRIALTGFAVFIYPDSSAQIAIVLLLAVVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERNQSQGVFAVVVVVAHACMVVVVLAQGLL 921
++HLS+AL +VF +Y +VS TI TF+C+TLDD YLRADYSL C + H ++YA LM VYP+GIP WWL +R DL D G + P DLW PY+P RY+YE++EC RRI LTG AVF++P ++AQ+AI + A +VV E+L+PF P++ WLYR+G VVF SMYLALLL+VD SDE ++SQ VFA V+V AH MV+ VL LL
Sbjct: 138 DKHLSIALFIVFAIYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVQDRSGGTTTPENLRPMKDLWEPYKPRRYFYELVECGRRIVLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPMDAWLYRSGALVVFFSMYLALLLKVDASDENSESQQVFAAVLVAAHVSMVLAVLLSSLL 360
BLAST of mRNA_Ecto-sp13_S_contig15591.4158.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI) HSP 1 Score: 236 bits (601), Expect = 1.350e-68 Identity = 121/239 (50.63%), Postives = 164/239 (68.62%), Query Frame = 1
Query: 235 AVVTVIQNRHLSVALLLVFVVYPTVSHTILDTFVCDTLDDGQSYLRADYSLDCDSPIHQRFKIYAALMTFVYPVGIPFALGWWLFRHRVDL-RADEVG-----RRANSRITPAADLWGPYRPERYYYEVIECFRRIALTGFAVFIYPDSSAQIAIVLLLAVVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERNQSQGVFAVVVVVAHACMVVVVLAQGLLIFMG 933
A + +++HLS+AL ++FVVY +VS I TFVC+TLDDG YLRADYSL C + H K+YA LM FVYP GIP WL +R DL + D G ++ + P DLW PY+P RYY+EV+EC RRIALTG AVFIYP S+AQ+A+ ++ A F+ +S++LSPFA P++ WLYR+G +V+F SM+L LLL+VD SDE +QSQ +FA +++ AH MV+ + Q +L G
Sbjct: 151 AGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVDANGGSTATAKSLGNLQPMRDLWAPYKPRRYYFEVVECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFAKLLISAHVGMVLAIAVQAVLSVKG 389
BLAST of mRNA_Ecto-sp13_S_contig15591.4158.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 246 bits (629), Expect = 3.110e-68 Identity = 125/241 (51.87%), Postives = 170/241 (70.54%), Query Frame = 1
Query: 226 EEEAVVTVIQNRHLSVALLLVFVVYPTVSHTILDTFVCDTLDDGQSYLRADYSLDCDSPIHQRFKIYAALMTFVYPVGIPFALGWWLFRHRVDLRADEVGRRANSRITPAADLWGPYRPERYYYEVIECFRRIALTGFAVFIYPDSSAQIAIVLLLAVVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERNQSQGVFAVVVVVAHACMVVVVLAQGLLIFMGWEGKT 948
+ EA V ++N+HLS AL ++F +Y +VS T+ TFVCDTLDDG SYLRADYSL CD+P + F+ YAA+M VYP+GIP W L +R DL+ + R AN + P DLW Y+P RYYYE+IE RRI LTG AVF+ P SSAQ+A+VLLLAVVF+ +SE LSPF + ++M LYR G+ VV AS+Y+ALLL+V+VS+E +++ F VV+++A+ CM + ++ Q L+ W T
Sbjct: 796 DSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRDRLAN--LQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVVQSFLLVREWRSST 1034
BLAST of mRNA_Ecto-sp13_S_contig15591.4158.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 245 bits (626), Expect = 1.360e-67 Identity = 126/231 (54.55%), Postives = 160/231 (69.26%), Query Frame = 1
Query: 253 QNRHLSVALLLVFVVYPTVSHTILDTFVCDTLDDGQSYLRADYSLDCDSPIHQRFKIYAALMTFVYPVGIPFALGWWLFRHRVDLRADEVGRRAN--------SRITPAADLWGPYRPERYYYEVIECFRRIALTGFAVFIYPDSSAQIAIVLLLAVVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERNQSQGVFAVVVVVAHACMVVVVLAQGLL 921
+++HLS+AL + FVVY +VS I TFVC+TLDDG +YLRADYSL C + +H YA LM VYPVGIP WWL +R DL +VG N + P DLW Y+P RYY+EV+EC RRIALTG A F+ PDS+AQ+AI ++LA +FM VS++LSPFA P + WLYR G +++F SMYLALLL+VD SDE +QSQ FA V++ AH MV+VVL Q +L
Sbjct: 833 KSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLV--KVGTSGNCLGGAPRLDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVL 1061
BLAST of mRNA_Ecto-sp13_S_contig15591.4158.1 vs. uniprot
Match: D7FUB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB5_ECTSI) HSP 1 Score: 232 bits (592), Expect = 1.390e-67 Identity = 128/259 (49.42%), Postives = 166/259 (64.09%), Query Frame = 1
Query: 256 NRHLSVALLLVFVVYPTVSHTILDTFVCDTLDDGQSYLRADYSLDCDSPIHQRFKIYAALMTFVYPVGIPFALGWWLFRHRVDL-RADEVGRRANSRITPAADLWGPYRPERYYYEVIECFRRIALTGFAVFIYPDSSAQIAIVLLLAVVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERNQSQGVFAVVVVVAHACMVVVVLAQGLLIF--MGWEGKTEKNERQTVFPAPAEGRASVAADWSF 1023
++HLS+AL +VF Y +VS TI TF+C+TLDD YLRADYSL C + H ++YA LM VYP+GIP WWL +R DL R G + P DLW PY+P RY+YE++EC RRI LTG AVF++P ++AQ+AI + A +VV E+L+PF PV+ LYR+G VVF SMYLALLL+VD SDE ++SQ VFA V+V AH MV+ VL + LL +G E +K E + V P R+S A F
Sbjct: 116 DKHLSIALFIVFATYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVRERSSGTATPENLRPMKDLWEPYKPRRYFYELVECGRRIGLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPVDAGLYRSGALVVFYSMYLALLLKVDASDESSESQQVFAAVLVAAHVSMVLAVLLRSLLSAKKVGIEAMRKKVEIRDV-PVANNTRSSWRASEIF 373 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15591.4158.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15591.4158.1 >prot_Ecto-sp13_S_contig15591.4158.1 ID=prot_Ecto-sp13_S_contig15591.4158.1|Name=mRNA_Ecto-sp13_S_contig15591.4158.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=510bp GVLSCTYLLALRRNNHHSRNSPGVSSFFVAAEASLASERDAPHSPVLHTQback to top mRNA from alignment at Ecto-sp13_S_contig15591:3..3606+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15591.4158.1 ID=mRNA_Ecto-sp13_S_contig15591.4158.1|Name=mRNA_Ecto-sp13_S_contig15591.4158.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3604bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15591:3..3606+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15591:3..3606+ >mRNA_Ecto-sp13_S_contig15591.4158.1 ID=mRNA_Ecto-sp13_S_contig15591.4158.1|Name=mRNA_Ecto-sp13_S_contig15591.4158.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1530bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15591:3..3606+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |