mRNA_Ecto-sp13_S_contig1555.4130.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1555.4130.1
Unique NamemRNA_Ecto-sp13_S_contig1555.4130.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1555.4130.1 vs. uniprot
Match: D7G0I7_ECTSI (PhyA2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I7_ECTSI)

HSP 1 Score: 590 bits (1520), Expect = 1.340e-205
Identity = 276/279 (98.92%), Postives = 277/279 (99.28%), Query Frame = 2
Query:  665 QDMPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELNVAAFFDIATPGQ 1501
            +DMPRDEFTAEAFFKGFTEGWTAAGGDA VGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELNVAAFFDIATP Q
Sbjct:  121 EDMPRDEFTAEAFFKGFTEGWTAAGGDAAVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELNVAAFFDIATPSQ 399          
BLAST of mRNA_Ecto-sp13_S_contig1555.4130.1 vs. uniprot
Match: A0A6H5K0D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0D8_9PHAE)

HSP 1 Score: 447 bits (1149), Expect = 6.640e-154
Identity = 218/277 (78.70%), Postives = 221/277 (79.78%), Query Frame = 2
Query:  671 MPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELNVAAFFDIATPGQ 1501
            MPRDEFTAEAFFKGFTEGWTAAGGD TVGSCPVPEPHFE VEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGEL    +                   ARP                              VKLVYYAAHDTNLLYLAELLDLKWVS+GWQPNHTPPGGELVFEAYM+DGELNVAAFFDIATP Q
Sbjct:    1 MPRDEFTAEAFFKGFTEGWTAAGGDTTVGSCPVPEPHFEGVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELRWGRIRQ-----------------ARP---------------------------ARRVKLVYYAAHDTNLLYLAELLDLKWVSEGWQPNHTPPGGELVFEAYMLDGELNVAAFFDIATPSQ 233          
BLAST of mRNA_Ecto-sp13_S_contig1555.4130.1 vs. uniprot
Match: R1DX28_EMIHU (Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DX28_EMIHU)

HSP 1 Score: 336 bits (861), Expect = 4.830e-107
Identity = 168/286 (58.74%), Postives = 204/286 (71.33%), Query Frame = 2
Query:  665 QDMPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVG-KVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELN------VAAFFDIATPGQ 1501
            ++MPRDE TAEAFFKG                C +P  H E VEYLIDQGSKPRG+ GQC LG++ +V+G VG  VD + RL +  L KL+++LGCC +SLCPA     + C+L D+P  WD  HWY TF+GP+YAGKYF+EW  L  LNGMD AWG+LS E+VM+L+AFVT+YR FEFDLLAARPFGSALL H+ A+L Q E+G+   A+AH P  +LVYYAAHDTNLLYLAELL LKW+S G+QPNHTPPGG LVFEA+      N      +A +FDI TP Q
Sbjct:  104 ENMPRDEKTAEAFFKGL--------------GCALPPLHSEGVEYLIDQGSKPRGENGQCALGTQAQVEGRVGGSVDGYLRLYKPLLAKLSELLGCCAKSLCPAGM---ESCSLEDLPGSWDPAHWYTTFSGPIYAGKYFAEWIELTMLNGMDFAWGKLSVEEVMELSAFVTQYRAFEFDLLAARPFGSALLSHIAASLTQWESGQREPALAHDPSPRLVYYAAHDTNLLYLAELLGLKWLSHGYQPNHTPPGGALVFEAFGPANPANPLDEWQIALYFDIQTPLQ 372          
BLAST of mRNA_Ecto-sp13_S_contig1555.4130.1 vs. uniprot
Match: R1FLM4_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FLM4_EMIHU)

HSP 1 Score: 334 bits (857), Expect = 1.450e-105
Identity = 167/286 (58.39%), Postives = 203/286 (70.98%), Query Frame = 2
Query:  665 QDMPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVG-KVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELN------VAAFFDIATPGQ 1501
            ++MPRDE TAEAFFKG                C +P  H E VEYLIDQGSKPRG+ GQC LG++ +V+G VG  VD + RL +  L KL+++LGCC +SLCPA     + C+L D+P  WD  HWY TF+GP+YAGKYF+EW  L  LNGMD AWG+LS E+VM+ +AFVT+YR FEFDLLAARPFGSALL H+ A+L Q E+G+   A+AH P  +LVYYAAHDTNLLYLAELL LKW+S G+QPNHTPPGG LVFEA+      N      +A +FDI TP Q
Sbjct:  109 ENMPRDEKTAEAFFKGL--------------GCALPPLHSEGVEYLIDQGSKPRGENGQCALGTQAQVEGRVGGSVDGYLRLYKPLLAKLSELLGCCAKSLCPAGM---ESCSLEDLPGSWDPAHWYTTFSGPIYAGKYFAEWIELTMLNGMDFAWGKLSVEEVMEFSAFVTQYRAFEFDLLAARPFGSALLSHIAASLTQWESGQREPALAHDPSPRLVYYAAHDTNLLYLAELLGLKWLSHGYQPNHTPPGGALVFEAFGPANPANPLDEWQIALYFDIQTPLQ 377          
BLAST of mRNA_Ecto-sp13_S_contig1555.4130.1 vs. uniprot
Match: A0A7S3SNZ1_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SNZ1_EMIHU)

HSP 1 Score: 325 bits (834), Expect = 5.590e-104
Identity = 164/280 (58.57%), Postives = 198/280 (70.71%), Query Frame = 2
Query:  683 EFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVG-KVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELN------VAAFFDIATPGQ 1501
            E TAEAFFKG                C +P  H E VEYLIDQGSKPRG+ GQC LG++ +V+G VG  VD + RL +  L KL+++LGCC +SLCPA     + C+L D+P  WD  HWY TF+GP+YAGKYF+EW  L  LNGMD AWG+LS E+VM+L+AFVT+YR FEFDLLAARPFGSALL H+ A+L Q E+G+   A+AH P  +LVYYAAHDTNLLYLAELL LKW+S G+QPNHTPPGG LVFEA+      N      +A +FDI TP Q
Sbjct:    1 EKTAEAFFKGL--------------GCALPPLHSEGVEYLIDQGSKPRGENGQCALGTQAQVEGRVGGSVDGYLRLYKPLLAKLSELLGCCAKSLCPAGM---ESCSLEDLPGSWDPAHWYTTFSGPIYAGKYFAEWIELTMLNGMDFAWGKLSVEEVMELSAFVTQYRAFEFDLLAARPFGSALLSHIAASLTQWESGQREPALAHDPSPRLVYYAAHDTNLLYLAELLGLKWLSHGYQPNHTPPGGALVFEAFGPANPANPLDEWQIALYFDIQTPLQ 263          
BLAST of mRNA_Ecto-sp13_S_contig1555.4130.1 vs. uniprot
Match: A0A7S0ECG0_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ECG0_9EUKA)

HSP 1 Score: 323 bits (828), Expect = 3.480e-101
Identity = 164/298 (55.03%), Postives = 202/298 (67.79%), Query Frame = 2
Query:  632 LPVCPSISCHLQD-MPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVG-KVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVD------GELNVAAFFDIATPGQ 1501
            +P C     + ++ MPRD  TAEAFFKG             +G    P  H E  EYLIDQGS PRGD G+C LG++ +V+G VG  VDE+ RL   +++KL+++LGCCD SLC    P    C+L D+P  +D++HWY TF+GP+YAGKYF+EW  L  LNGMD AWG+L+ E+VM+L+AFVT+YR FEFD+LAARPFGSALL HV A L Q   G    AV H    +LVYYAAHDTNLLYLAELL+LKW++KGWQPNHTPPGG LV EA          GE  +A FFD+ TP Q
Sbjct:  109 VPGCRGAYVYCEEKMPRDAKTAEAFFKG-------------MGCETTPALHSEGAEYLIDQGSTPRGDQGECALGTQAQVEGRVGGSVDEYLRLYMPRIRKLSELLGCCDASLCGK--PAGSSCSLEDLPSAFDQKHWYTTFSGPMYAGKYFAEWIELTMLNGMDFAWGKLTVEEVMELSAFVTQYRAFEFDMLAARPFGSALLAHVGATLQQWAGGAAQPAVTHAASERLVYYAAHDTNLLYLAELLELKWLAKGWQPNHTPPGGMLVVEALAPTNDANPTGEWQLAVFFDVQTPQQ 391          
BLAST of mRNA_Ecto-sp13_S_contig1555.4130.1 vs. uniprot
Match: A0A7S0J047_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J047_9EUKA)

HSP 1 Score: 142 bits (359), Expect = 3.890e-37
Identity = 69/121 (57.02%), Postives = 82/121 (67.77%), Query Frame = 2
Query:  923 QKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDE--EHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGE 1279
            +KL D LGCC   LC      D PC L  +   WD   +HWY TF GP+YAGKYF+EWF L  LNGM+ A+G L+  +VM+L AFVT YR FEFD LAARPFGS LLMH++A L Q  +GE
Sbjct:    6 RKLGDALGCCAPELCDGIDGGDGPCALERLRTEWDPNPKHWYTTFLGPLYAGKYFAEWFELTMLNGMEYAFGSLTPAEVMELTAFVTAYRAFEFDALAARPFGSTLLMHILATLRQWASGE 126          
BLAST of mRNA_Ecto-sp13_S_contig1555.4130.1 vs. uniprot
Match: A0A1V9YF74_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YF74_9STRA)

HSP 1 Score: 130 bits (327), Expect = 4.300e-29
Identity = 92/310 (29.68%), Postives = 136/310 (43.87%), Query Frame = 2
Query:  638 VCPSISCHLQDMPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKV--DEWTRLLRSKLQKLNDVLGCCDRSLCPADHPED-----QPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDA-------VAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDG--------ELNVAAFFDIATPGQ 1501
             C     +  D  RD  TA+AF  GF              +C   +P       L +QG  P      C   S+    G+VG V  D   R L  ++Q+LNDV+ CC   +C A            C L  +P  W  + +Y  ++      +Y SEWFLL  LN M +   + + ED+++L A    +     +   A  FGS LL+H+VA++D+  T   +         + H    + +YYA HD NLLYL  LL ++W +  W  N   PG  L+FE +  +G        +  V A+F  A+P Q
Sbjct:  105 TCTKTFAYADDNERDIDTAQAFLDGFLPP-----------ACAGVKPDTTGARLLFEQGQDP---TAICPATSQTLYHGIVGNVTADNIIRHLAPEIQELNDVVDCCKPEVCTATSARSLLAQASTCNLFTVPSTWSGK-FYEPWSDAFSEAQYLSEWFLLQSLNNMTLPPSK-TLEDMIELGAVHNAHIQLITNQFNAENFGSTLLVHLVASMDEAITQRPVPIAPGTGPHLLHDIASRFLYYAGHDINLLYLKNLLRMEWDTNNWNANQPNPGSMLLFEVHADEGKETSTSVEDFFVQAYFVAASPKQ 398          
BLAST of mRNA_Ecto-sp13_S_contig1555.4130.1 vs. uniprot
Match: A0A329SVH3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SVH3_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.070e-28
Identity = 89/296 (30.07%), Postives = 136/296 (45.95%), Query Frame = 2
Query:  638 VCPSISCHLQDMPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKVDEWTRL--LRSKLQKLNDVLGCCDRSLCPADHPEDQP-----------CTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDA-------VAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELN 1465
             C     +  +  RD  TA AF  G                C    P  +E + L +QG  P  D   C + S+   +G+ G  D    L  +R ++ ++ND+L CC  S+C  D   D+P           C L  +P  W+   +Y+ +   +    YFSEW LL  LN M +   +LS E ++ LA     +     + + +  FG+ LL H+ A+ +Q    + L         +   P+ +L+YYAAHD NLLY+  LL L+W +KGW+P+   PGG LVFE +    + N
Sbjct:  121 ACEETFAYADNNQRDNLTAVAFLSGLYP------------LCKELVPITKETQLLFEQGQDPTAD---CPVCSKAVYEGITGSNDTSFVLQEIREEVAEVNDLLQCCAASVCSID---DEPANSDLIESSATCDLFGIPTQWNGA-FYLPWKDTLSNADYFSEWLLLQSLNNMSLP-SQLSFEKILSLAKIHETHMDLITNEVNSANFGATLLAHLTASFEQNIMQKPLPVAKGEGPHLLQGPENRLLYYAAHDINLLYVRNLLRLQWYTKGWRPHQPVPGGMLVFELHATPTKGN 396          
BLAST of mRNA_Ecto-sp13_S_contig1555.4130.1 vs. uniprot
Match: A0A081AR47_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A081AR47_PHYPR)

HSP 1 Score: 126 bits (317), Expect = 4.530e-28
Identity = 87/294 (29.59%), Postives = 132/294 (44.90%), Query Frame = 2
Query:  638 VCPSISCHLQDMPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKVDEWTRLLRSKLQK----LNDVLGCCDRSLCPADHP-------EDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDA-------VAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELN 1465
             C     +  +  RD  TA AF  G                C    P  +E + L +QG  P      C + S    +G+ G  D  TR +  ++Q+    +N++L CC  S+C  D         E   C L  +P  W+   +Y+ +   +    YFSEW LL  LN M +   +LS E ++ LA     +     + + +  FG+ LL H+ A+ +Q    + L         +   P+ +L+YYAAHD NLLY+  LL L+W +KGW P+   PGG LVFE +    + N
Sbjct:   96 ACEETFAYADNNQRDNLTALAFLNGLYP------------LCTELVPITKETQSLFEQGQDP---TANCPVCSRAVYEGITGSND--TRFVLQEIQEEVAEVNELLQCCAASVCSTDEEPEKSDSTESATCDLFGIPTQWNGA-FYLPWKDTLSNADYFSEWLLLQSLNNMSLP-SQLSFEKILSLARIHETHMDLITNEVNSANFGATLLAHLTASFEQNIMQKPLPVAKGEGPHLLQGPENRLLYYAAHDINLLYVRNLLRLQWHTKGWHPHQPVPGGMLVFELHATPTKSN 370          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1555.4130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0I7_ECTSI1.340e-20598.92PhyA2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 Re... [more]
A0A6H5K0D8_9PHAE6.640e-15478.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
R1DX28_EMIHU4.830e-10758.74Uncharacterized protein (Fragment) n=1 Tax=Emilian... [more]
R1FLM4_EMIHU1.450e-10558.39Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S3SNZ1_EMIHU5.590e-10458.57Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S0ECG0_9EUKA3.480e-10155.03Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S0J047_9EUKA3.890e-3757.02Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A1V9YF74_9STRA4.300e-2929.68Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A329SVH3_9STRA2.070e-2830.07Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A081AR47_PHYPR4.530e-2829.59Uncharacterized protein n=1 Tax=Phytophthora paras... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1555contigEcto-sp13_S_contig1555:10900..16659 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score588.6
Seed ortholog evalue1.5e-165
Seed eggNOG ortholog2880.D7G0I7
Model size1501
Hectar predicted targeting categoryother localisation
Exons8
EggNOG OGs28MDD@1,2QTWT@2759
Ec32 ortholog descriptionHistidine phosphatase superfamily, clade-2
Ec32 orthologEc-20_002470.1
Cds size831
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1555.4130.1prot_Ecto-sp13_S_contig1555.4130.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1555 12851..16659 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462824.6508627-UTR-Ecto-sp13_S_contig1555:10899..111151681462824.6508627-UTR-Ecto-sp13_S_contig1555:10899..11115Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1555 10900..11115 +
1681462824.6619244-UTR-Ecto-sp13_S_contig1555:12396..128501681462824.6619244-UTR-Ecto-sp13_S_contig1555:12396..12850Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1555 12397..12850 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462824.671765-CDS-Ecto-sp13_S_contig1555:12850..129911681462824.671765-CDS-Ecto-sp13_S_contig1555:12850..12991Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1555 12851..12991 +
1681462824.6831355-CDS-Ecto-sp13_S_contig1555:13449..136291681462824.6831355-CDS-Ecto-sp13_S_contig1555:13449..13629Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1555 13450..13629 +
1681462824.6914597-CDS-Ecto-sp13_S_contig1555:13977..141261681462824.6914597-CDS-Ecto-sp13_S_contig1555:13977..14126Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1555 13978..14126 +
1681462824.7072878-CDS-Ecto-sp13_S_contig1555:14724..147991681462824.7072878-CDS-Ecto-sp13_S_contig1555:14724..14799Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1555 14725..14799 +
1681462824.7159934-CDS-Ecto-sp13_S_contig1555:15209..153031681462824.7159934-CDS-Ecto-sp13_S_contig1555:15209..15303Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1555 15210..15303 +
1681462824.7231338-CDS-Ecto-sp13_S_contig1555:15946..160181681462824.7231338-CDS-Ecto-sp13_S_contig1555:15946..16018Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1555 15947..16018 +
1681462824.7309804-CDS-Ecto-sp13_S_contig1555:16539..166591681462824.7309804-CDS-Ecto-sp13_S_contig1555:16539..16659Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1555 16540..16659 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1555.4130.1

>prot_Ecto-sp13_S_contig1555.4130.1 ID=prot_Ecto-sp13_S_contig1555.4130.1|Name=mRNA_Ecto-sp13_S_contig1555.4130.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=277bp
MPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSK
PRGDAGQCRLGSEQEVQGVVGKVDEWTRLLRSKLQKLNDVLGCCDRSLCP
ADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMD
VAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQME
TGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPG
GELVFEAYMVDGELNVAAFFDIATPGQ
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mRNA from alignment at Ecto-sp13_S_contig1555:10900..16659+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1555.4130.1 ID=mRNA_Ecto-sp13_S_contig1555.4130.1|Name=mRNA_Ecto-sp13_S_contig1555.4130.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5760bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1555:10900..16659+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGTCGAACAAACATCCTGCGTGCAGCCATGCCCTCAAGCCTCGCTT GAAGCCCCTTGTGCTGGCTACGGTGATGATGGTGACGTCGTGTTCTTCAA GGACACCCGATGGCTTGATAGTCGTGTCCAGGCACGGCGTCAGGAGGCAG TTCCCGAGCTCAACGCACGACTTCAGCAAGTACGCCCCTGGGAAGACCTT CGAGACAGAAGACAAGGTGTGCTTTGCAGGAGGGGGGGGGCTGGTTTGCT TGACCATGGCAAGCGCAGGCAGGGTTGCTTCTAGGAACAACGTTGATTTC CGACAGAAGGAAACAAGAACAACGTGCGGACAGACCTTACCCACCACGCT CAGTGCATGCTGTGTAAGACGATCCAGACGAACAGCAGCGGGGTCACGGC TTTCTGGCCTTCATTCTTCTCTTTCCACGAAGCAAGCCGCTGTCCTACAA GAGCTCTCGCGCTGAAGGTGGCCCGCCTTGCTCCTGTCCGGTTCACCAGT GCGAGCCAACCAAAGATCCTGCCGTGGACACATTTGTTCCGCCGTGTGCA CTGCTGGACACAACTTGTACACGACCCAGGCAGGCACCCACCTCTGGATG AAACGAAATAGGACCGGCCACACGTACACGCATCTTCACCACCGGTCATG TGTCCACACCCAGAGCCATAAACTTGTCGACGCACAGGCACACACGTCCT GCAACCCCGGCTCAGACCCAAGCACCACCTTTCCCCTCTCAAAAATTTGG TCGATTTCTTGTTGTCCGAAACGAAACTCACAAGAAACATGCGCTCCGTT TGACGTAATTGTGCGGCGTCCTTGCGATTCCACAGCTTGCAGATCAATAC CAGACGAGATAGCAGCAGTCTAACGAAAGTTGAGTCGTGTTATCATGTCG ATTGAAAGCGCTCATTCCTCCGCTGGCGGTAGGGGGGGGGGTGTAGCGGG TAGCGGGGAAGTTTCAGCGACGGGATCAACGCTATTAGTAAGTGCATATC TTTGTCTTGGACGCAATTTCTCCGCACCATGTGATAATTGGAAGCCATGT GGTACATTATACATGTAGCCATAAACATCGCCGTGTCTACACCACCGATG CAAGATGAAAATGCAAGTGTGCTATATTTGCTGTAGGTTCGAAGGGTTCT TCGCAGTACTGCTACGCACACCTTGTTTTCATTTAACAGTATTCAGACAG GTACACTTCTGTACGCGATGTCCGGTAGAAAGCGCCCTGTTACCTAAATC TTGTCCGTGTGTGGTAGGTAGAGAACATGATCCAAATCTATACACTGGTT GATCACTCCATCCGATAACCGATGCTTGAAACACAGCAGCAGCCTTTGTT CTCGAAACTGTCACATGATCCAATTCGTGAGTTCGAATCCCGGGGTTTGT CTAATACAATTTCCTGTCTTTTTTTATTTTGCCCTATCGGCGTGTGCGGG TGTGCTCACGACCCTGCCGCCGCGCTCTCTCATGCGTGCGTGAACAGGAC TGGGGTGTGGACGGGTCCATGGGCGTCCTGACGCAGCACGGCTACGACGC CGCGCACCTAATGGGAAAGTTTCAGGGGCAGAAGTACGCCGGCGATGGAC TTCCCCTCGACTCTTGCTCGGACATGTTCGTCTACTGCGAAGAGGCGAGT CGTCGCTGCTGGCAGAGTTGGTAGGAGCGGGCGGGAGGGGGGACAAGAGA CATAGGGAAAATGTCGAAGATCAAGCTGGTTGTTGAGGGCCAAATCTCCT CAGATAAAGATACCATCCGCGATGAGGGATCAAGTGACAGACAACCCCCG CTGATGGTGTGATCGCTACGGTTGCGAGAACCACGGCCCCTGCCCACCAC CGCCGTACCGGGGTGGTTGGTGTCCCTTATGGCCCATTTGTTAGTCGAAC CAACACCCTTGCCTGCCCGTCTGTCCGTCTATCTCGTGTCATCTTCAGGA CATGCCTCGCGACGAGTTCACGGCGGAGGCGTTCTTCAAGGGTTTCACGG AGGGATGGACAGCCGCGGGCGGCGACGCGACTGTGGGGAGCTGTCCCGTT CCCGAGCCGCACTTCGAAGAGGTCGAGTACCTCATCGACCAGGTTTGTGT GATTGCACAAGTGTTGCTGCTGTGGTCCTGCCTGTCTTGTCATCGTAGAT GAAGCTTTGCTTGAAGAGTTTATTACGATACCGCGTTCAAGGGGGTGAGG TGAGGGAGGCGGGGGGGGTCTTGTTGCTTGCCTGCTTGCGTTGCGCGTAG CCTGTTCGTTACAACCGGTATTCGAAAAGGCTGACCTTCTTCTACCGGCC ACCCATCTCCCTGCGGATGTTACCACGTATGGTACCCGCCCCCCCCGCCT CCCTATCCACGCACAAATCCCCGCGGGTGCTCGCTACCGACCCTTCCTAC AGAGGAGCGCCTCCTACTGACGAAATGTACGATGTGTTAGCGATCTGACG AAATGTTTTTGTTTTGTGATCCGGCGGAACGCTTCGTGGTTTGTGATCTG CCGGCGCGCCCCTACCGTGTTTCCGTTCACTAACGACAAATTCAACGCAG GGGAGCAAGCCTCGCGGCGACGCTGGCCAGTGCCGGCTCGGCTCGGAGCA GGAGGTGCAAGGTGTCGTGGGCAAGGTGGACGAGTGGACACGGCTGCTGA GGAGCAAGCTGCAGAAGCTGAACGACGTGCTGGGCTGCTGCGACCGGTCG CTGTGTCCCGCGGACCACCCGGAGGACCAGGTAATTTTTGTGCCTGCTGG CGTTGCTCCTCTTGTAGCGTCATGGTAGTTGTTGTTTTATTTGCGTTTGT TCTTACTTTTTCCCTCTCGTGTCTGAAGTGGGGAACGCCTCGGCGCTATG TAAATCGCCCTCCGCTTGCCATGCCGGGCACCAATTCCCCGAGGCACACA CGAACGTTTATACGTGTTGCCCGAATGAGAGAGACTCTGACGCCGTCTTA ACGGCAGTTTTGTCCTCTGCCCTGTGATGTAGCTCGTCAGCCGATGCGCT CCGAAGCAAAAATATTGCTTTTGACCACCAATCAACGGTAAATACACCGT CGCGTCGCCGCCGCCGTCCATGTATCAGCCGTGCACACTGATGGACATGC CTCACGTGTGGGACGAGGAACACTGGTACGTTACCTTCACGGGACCCGTC TACGCCGGCAAGTACTTCTCGGAGTGGTTCCTCCTCAACTACCTCAACGG CATGGATGTCGCCTGGGGTGAACTCAGGTGGGGGTGAAACTGTGCAGGAG CGGCCCGTCCGGGGGGGGGGAGGTACTCATGTTTTGCATGCCTTAGTTGT TAAGGGACCACGCGTCCTCGAGAGGGGGGGGTGGGGGGACGAAGGGTCTC TCCCCAGCAGCACAGGAGACGTTTTTTTTTGCCCCGCTCGGTGGTTGGTT TGCCTACGCTGCTATACCTCGCTACCGGGTAGGGCAGTTGATGTTCACAC CTCGAGTATGTATGATGCCAAGCTTTCGAAGCTTTTACATGAGCTGGCTT GTCTGTCTATACTCGTCCTTGTTGTTGGAATCGAGACTTGTCTTGTTGAA ATGACGTCGTTTTCCGCGGACTTTGGAGGTGCTTCCCTTTTCTCCAGACC CTCCCTCCCCCGCCGCTCCGCCCCTCCCAAGTTTGTCTTGACCGTTCCAT GCATCTCCGGTGCTCATGGTGTATCTCGACCGCTCCATGCTTCTCCGGTG CGCACGCGTAATCGTGTGACCGCTCGGTCCTTCTCCTGTGCCCACGTTTC TATCTTAACCGCTCTCTGCTTTTCCGGTGCTGGTTTATTTCATGGTGCGT TTTATTTATTGCCGGGTTGTGCCAGCGAGGAGGACGTGATGGACCTGGCT GCCTTCGTGACGGAGTACCGACACTTCGAGTTCGATCTGCTGGCGGCGAG GTAAGCTCACGAGCATCGTTGTTGCCGCCGCGGCCTCGAGTCTTGTGGGT TTGATGCAGAGGTTGTGGCGTTGGATAAGGCGGAGCGACGGTTTCGTACG CGTCTGCTGTGTTTATGCTGGTTCGGAGGGCCTTCTCGTTTCGACGAGAA CAGGTGCACATGCCGCACGTACCTCCCCGCCGCTGGGGACCCGTTCCCGT AGCCAGAGGAGCGCAAAGAAGTCGCGTCCGTAGTTATCGTACCAGACACA CCGCCTGCGCCCTTGACTCGTGGTAACCTGTAAAGCCACGTGGGTGGTGA TTGCCTACCCATGGTTTTCGTTTGCTTCTTGCCGCGCACCCGGCGTCTGC GTCTCTCTTCTACCTGCGACACGCACCATGTCGAACGCGCCCCGGCCGCA TCCTTCACAGACCGTTCGGCAGCGCCCTCCTGATGCACGTCGTGGCCGCC CTGGACCAGATGGAGACGGGAGAAAACCTCGACGCTGTGGCCCACACCCC CGACGTGAGAGCCGAGTTTGGTTTGCGACGAGAGAATCAAGTTGCACACT TTTCCGTTCGGGGTTGAGAGCCAGCCGCTTGTACGTAGCGAGGTCGATCG GCGGCTCGTGTATACACCCTGCCGGTGTCGGTGTCATCCCCTGTCCCCCC CCCCCCCCTCCCGTCGACTCGTGGTTCATCCGATCGAAAGCCGTGCTTGG CTGACTTCTCTTGAAAGTTTTTTTTTCTGTGTTTTTGGGGTGTCCTCTGT TGTTGCCTTACTGCAGTGACGGGCTTGTCTTGATGCTCGCGGGTGGGTAC GGAAGCGAGGAGAGAGATTTCGCGGCCGCGGGTTACCCTGCGGTGCGACT TTGTGGCCGGTGTCCAAAGGAACCGACGTGTCCGCCTTTGGTATTTGACC TGTTGTGCTTCGAGCCATGCGTTCTTTGCTCCAGCTTTTGGTTTGTCGGG GCATGCGCACTCGTCTCACTTTCGGCAGTGACTTTCTCATCTTGTGGTGC ACCTTGCTTATCGCGCCTTTCTTCAAGCGCGGTTTCACCGTTGCATCTTT TCTCGGCTGTCCTTCGCATCTATCTCCGCAAGGCCGAACCCAACCGGTGC CTCCACTCTTTTATTTGTCACCTGTTTCCCGTGTCTGTCGTCCACAGGTA AAGCTGGTGTACTACGCGGCCCACGACACCAACCTCCTCTACCTGGCGGA GCTGCTGGACCTCAAGTGGGTGAGTGACGATACTGATGATGCTCTGCGCG CATCCGGTTGTCTTCTGACTCTTTAGGTGTTGTTAGCTGCGGCTGTTGTT GTTTTTGCCGTCACCGCTCAAAAAAATTGAGAGTTGAGCGAATATGGACC CCAAGCGACGTTCAAAATGCTGACGAGAGCGGTCAATCTTGGCCGTTCTC GTTCAACCCTGTTGATTCGTGATTGTGCAGCCAGCCCGACCTGTGTTTGT GTACCAAGGTTCCGAAAGAGACCCTGATGGTCGTCAGGCTCGGTGCCGAA GCGTGGCGTCGACAAAGAAATAAAAAGAACGGGCGGCACCAATGTGGCCT CGTTGCGTTCGTGCGTGGTACGGTACCGTTTGGGATTGTTTTACTAGCCA GTGTTTCGGCGCTGAATAGAAAACCGTCGTTTTTCTCGTACCGTTCCATA CCACATCATACCATTCCGTACCACACAGTCCTGCCGTGCTATTTAGATGG CTCACTCTCATTCTTGATGCTGCTGCTGCTGCTGCTACAGGTAAGCAAGG GCTGGCAGCCGAACCACACCCCTCCCGGGGGCGAGCTGGTGTTCGAGGCG TACATGGTGGACGGCGAGCTCAACGTGGCGGCGTTCTTCGACATCGCCAC TCCCGGCCAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1555:10900..16659+

>mRNA_Ecto-sp13_S_contig1555.4130.1 ID=mRNA_Ecto-sp13_S_contig1555.4130.1|Name=mRNA_Ecto-sp13_S_contig1555.4130.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=831bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1555:10900..16659+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCTCGCGACGAGTTCACGGCGGAGGCGTTCTTCAAGGGTTTCACGGA
GGGATGGACAGCCGCGGGCGGCGACGCGACTGTGGGGAGCTGTCCCGTTC
CCGAGCCGCACTTCGAAGAGGTCGAGTACCTCATCGACCAGGGGAGCAAG
CCTCGCGGCGACGCTGGCCAGTGCCGGCTCGGCTCGGAGCAGGAGGTGCA
AGGTGTCGTGGGCAAGGTGGACGAGTGGACACGGCTGCTGAGGAGCAAGC
TGCAGAAGCTGAACGACGTGCTGGGCTGCTGCGACCGGTCGCTGTGTCCC
GCGGACCACCCGGAGGACCAGCCGTGCACACTGATGGACATGCCTCACGT
GTGGGACGAGGAACACTGGTACGTTACCTTCACGGGACCCGTCTACGCCG
GCAAGTACTTCTCGGAGTGGTTCCTCCTCAACTACCTCAACGGCATGGAT
GTCGCCTGGGGTGAACTCAGCGAGGAGGACGTGATGGACCTGGCTGCCTT
CGTGACGGAGTACCGACACTTCGAGTTCGATCTGCTGGCGGCGAGACCGT
TCGGCAGCGCCCTCCTGATGCACGTCGTGGCCGCCCTGGACCAGATGGAG
ACGGGAGAAAACCTCGACGCTGTGGCCCACACCCCCGACGTAAAGCTGGT
GTACTACGCGGCCCACGACACCAACCTCCTCTACCTGGCGGAGCTGCTGG
ACCTCAAGTGGGTAAGCAAGGGCTGGCAGCCGAACCACACCCCTCCCGGG
GGCGAGCTGGTGTTCGAGGCGTACATGGTGGACGGCGAGCTCAACGTGGC
GGCGTTCTTCGACATCGCCACTCCCGGCCAG
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