mRNA_Ecto-sp13_S_contig15538.4122.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: D7FYP6_ECTSI (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP6_ECTSI) HSP 1 Score: 222 bits (566), Expect = 1.350e-65 Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 1
Query: 145 LQNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 480
++NMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE
Sbjct: 1 MKNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 112
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: D7FYP7_ECTSI (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP7_ECTSI) HSP 1 Score: 200 bits (509), Expect = 3.840e-57 Identity = 100/112 (89.29%), Postives = 105/112 (93.75%), Query Frame = 1
Query: 145 LQNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 480
L+NM+ Q +FWAEQMQEM LEIGTEQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKT+IFDFLV VI+
Sbjct: 20 LKNMKEQQTKFWAEQMQEMNVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVDVIQ 131
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: A0A7S2DIM4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DIM4_9STRA) HSP 1 Score: 189 bits (479), Expect = 7.560e-53 Identity = 94/112 (83.93%), Postives = 100/112 (89.29%), Query Frame = 1
Query: 145 LQNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 480
L MQ L FW QM+EM+ LEIGTEQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSWCYSE+NKRRTLQKEDIQ AI+KT+IFDFLV VI+
Sbjct: 22 LAQMQDMLQGFWQSQMKEMDVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEQNKRRTLQKEDIQTAIKKTEIFDFLVDVIQ 133
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: A0A6V1P6K4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6K4_HETAK) HSP 1 Score: 189 bits (481), Expect = 2.100e-52 Identity = 93/112 (83.04%), Postives = 103/112 (91.96%), Query Frame = 1
Query: 145 LQNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 480
LQ+MQ LNRFW EQM+EME L+IGTEQDFKNHNDLPL RIKRIMK DEDVRMI+AEAP+LFAKA EMFILE+TLRSWCYSE+NKRRTLQKEDIQ +IRKT+IFDFLV VI+
Sbjct: 74 LQHMQGLLNRFWDEQMREMEALQIGTEQDFKNHNDLPLMRIKRIMKSDEDVRMIAAEAPILFAKATEMFILEITLRSWCYSERNKRRTLQKEDIQTSIRKTEIFDFLVDVIQ 185
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: K3WAN7_GLOUD (CBFD_NFYB_HMF domain-containing protein n=25 Tax=Oomycota TaxID=4762 RepID=K3WAN7_GLOUD) HSP 1 Score: 187 bits (476), Expect = 2.360e-52 Identity = 94/108 (87.04%), Postives = 99/108 (91.67%), Query Frame = 1
Query: 154 MQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVI 477
M+ QL FWA+Q+QEME LE+G+EQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR TDIFDFLV VI
Sbjct: 30 MEQQLKSFWAKQLQEMEQLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVI 137
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: A0A7S2SRM6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRM6_9STRA) HSP 1 Score: 186 bits (473), Expect = 8.390e-52 Identity = 92/110 (83.64%), Postives = 99/110 (90.00%), Query Frame = 1
Query: 151 NMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 480
+M+ L FW Q QEM+TL IGTEQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSWCYSE+NKRRTLQKEDIQ AIR+T+IFDFLV VI+
Sbjct: 38 HMRQMLRNFWQTQQQEMDTLAIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEQNKRRTLQKEDIQTAIRRTEIFDFLVDVIQ 147
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: W4HC48_9STRA (CBFD_NFYB_HMF domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=W4HC48_9STRA) HSP 1 Score: 184 bits (467), Expect = 3.410e-51 Identity = 94/111 (84.68%), Postives = 98/111 (88.29%), Query Frame = 1
Query: 145 LQNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVI 477
L M+ QL FWA Q+ EME LE+G+EQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR TDIFDFLV VI
Sbjct: 19 LAQMEQQLKVFWAGQLAEMEKLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVI 129
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: A0A067D1Y5_SAPPC (CBFD_NFYB_HMF domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D1Y5_SAPPC) HSP 1 Score: 184 bits (466), Expect = 4.720e-51 Identity = 93/108 (86.11%), Postives = 98/108 (90.74%), Query Frame = 1
Query: 154 MQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVI 477
M++QL FWA Q+ EME LE+G+EQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR TDIFDFLV VI
Sbjct: 22 MEAQLKVFWAGQLAEMEKLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVI 129
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: A0A836C8W6_9STRA (Histone-fold-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W6_9STRA) HSP 1 Score: 181 bits (458), Expect = 5.760e-50 Identity = 92/114 (80.70%), Postives = 97/114 (85.09%), Query Frame = 1
Query: 139 VLLQNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 480
L N+ + L +FW EQMQEME LEI TEQ FK HNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTL KEDIQ AI KTD+FDFLV VI+
Sbjct: 14 AFLANLHAGLAQFWGEQMQEMEVLEISTEQAFKVHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWAYSEKNKRRTLTKEDIQEAIEKTDVFDFLVEVIQ 127
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: A0A812R7W0_SYMMI (NFYC2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812R7W0_SYMMI) HSP 1 Score: 180 bits (456), Expect = 1.470e-49 Identity = 88/107 (82.24%), Postives = 98/107 (91.59%), Query Frame = 1
Query: 148 QNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLV 468
+++Q L++FW EQ+ EM LEIGTEQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEK KRRTLQK+DI+AAI+ T+IFDFLV
Sbjct: 25 EHLQKALHQFWMEQIAEMNALEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKMKRRTLQKDDIEAAIKNTEIFDFLV 131 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15538.4122.1 >prot_Ecto-sp13_S_contig15538.4122.1 ID=prot_Ecto-sp13_S_contig15538.4122.1|Name=mRNA_Ecto-sp13_S_contig15538.4122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp MDTHSNSPPPPRRRFVCFVLLQNMQSQLNRFWAEQMQEMETLEIGTEQDFback to top mRNA from alignment at Ecto-sp13_S_contig15538:429..3928+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15538.4122.1 ID=mRNA_Ecto-sp13_S_contig15538.4122.1|Name=mRNA_Ecto-sp13_S_contig15538.4122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3500bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15538:429..3928+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15538:429..3928+ >mRNA_Ecto-sp13_S_contig15538.4122.1 ID=mRNA_Ecto-sp13_S_contig15538.4122.1|Name=mRNA_Ecto-sp13_S_contig15538.4122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=399bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15538:429..3928+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |