prot_Ecto-sp13_S_contig15538.4122.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15538.4122.1
Unique Nameprot_Ecto-sp13_S_contig15538.4122.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length133
Homology
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: D7FYP6_ECTSI (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP6_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 1.100e-72
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0
Query:   21 LQNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 132
            ++NMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE
Sbjct:    1 MKNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 112          
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: D7FYP7_ECTSI (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP7_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 9.970e-64
Identity = 100/112 (89.29%), Postives = 105/112 (93.75%), Query Frame = 0
Query:   21 LQNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 132
            L+NM+ Q  +FWAEQMQEM  LEIGTEQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKT+IFDFLV VI+
Sbjct:   20 LKNMKEQQTKFWAEQMQEMNVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVDVIQ 131          
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: A0A7S2DIM4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DIM4_9STRA)

HSP 1 Score: 187 bits (476), Expect = 3.960e-59
Identity = 94/112 (83.93%), Postives = 100/112 (89.29%), Query Frame = 0
Query:   21 LQNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 132
            L  MQ  L  FW  QM+EM+ LEIGTEQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSWCYSE+NKRRTLQKEDIQ AI+KT+IFDFLV VI+
Sbjct:   22 LAQMQDMLQGFWQSQMKEMDVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEQNKRRTLQKEDIQTAIKKTEIFDFLVDVIQ 133          
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: A0A6V1P6K4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6K4_HETAK)

HSP 1 Score: 188 bits (478), Expect = 1.040e-58
Identity = 93/112 (83.04%), Postives = 103/112 (91.96%), Query Frame = 0
Query:   21 LQNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 132
            LQ+MQ  LNRFW EQM+EME L+IGTEQDFKNHNDLPL RIKRIMK DEDVRMI+AEAP+LFAKA EMFILE+TLRSWCYSE+NKRRTLQKEDIQ +IRKT+IFDFLV VI+
Sbjct:   74 LQHMQGLLNRFWDEQMREMEALQIGTEQDFKNHNDLPLMRIKRIMKSDEDVRMIAAEAPILFAKATEMFILEITLRSWCYSERNKRRTLQKEDIQTSIRKTEIFDFLVDVIQ 185          
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: K3WAN7_GLOUD (CBFD_NFYB_HMF domain-containing protein n=25 Tax=Oomycota TaxID=4762 RepID=K3WAN7_GLOUD)

HSP 1 Score: 186 bits (473), Expect = 1.330e-58
Identity = 94/108 (87.04%), Postives = 99/108 (91.67%), Query Frame = 0
Query:   24 MQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVI 131
            M+ QL  FWA+Q+QEME LE+G+EQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR TDIFDFLV VI
Sbjct:   30 MEQQLKSFWAKQLQEMEQLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVI 137          
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: A0A7S2SRM6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRM6_9STRA)

HSP 1 Score: 185 bits (470), Expect = 5.090e-58
Identity = 92/110 (83.64%), Postives = 99/110 (90.00%), Query Frame = 0
Query:   23 NMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 132
            +M+  L  FW  Q QEM+TL IGTEQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSWCYSE+NKRRTLQKEDIQ AIR+T+IFDFLV VI+
Sbjct:   38 HMRQMLRNFWQTQQQEMDTLAIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEQNKRRTLQKEDIQTAIRRTEIFDFLVDVIQ 147          
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: W4HC48_9STRA (CBFD_NFYB_HMF domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=W4HC48_9STRA)

HSP 1 Score: 183 bits (464), Expect = 2.420e-57
Identity = 94/111 (84.68%), Postives = 98/111 (88.29%), Query Frame = 0
Query:   21 LQNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVI 131
            L  M+ QL  FWA Q+ EME LE+G+EQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR TDIFDFLV VI
Sbjct:   19 LAQMEQQLKVFWAGQLAEMEKLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVI 129          
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: A0A067D1Y5_SAPPC (CBFD_NFYB_HMF domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D1Y5_SAPPC)

HSP 1 Score: 182 bits (463), Expect = 3.430e-57
Identity = 93/108 (86.11%), Postives = 98/108 (90.74%), Query Frame = 0
Query:   24 MQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVI 131
            M++QL  FWA Q+ EME LE+G+EQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR TDIFDFLV VI
Sbjct:   22 MEAQLKVFWAGQLAEMEKLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVI 129          
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: A0A836C8W6_9STRA (Histone-fold-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W6_9STRA)

HSP 1 Score: 179 bits (455), Expect = 5.160e-56
Identity = 92/114 (80.70%), Postives = 97/114 (85.09%), Query Frame = 0
Query:   19 VLLQNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 132
              L N+ + L +FW EQMQEME LEI TEQ FK HNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTL KEDIQ AI KTD+FDFLV VI+
Sbjct:   14 AFLANLHAGLAQFWGEQMQEMEVLEISTEQAFKVHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWAYSEKNKRRTLTKEDIQEAIEKTDVFDFLVEVIQ 127          
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Match: A0A812R7W0_SYMMI (NFYC2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812R7W0_SYMMI)

HSP 1 Score: 179 bits (453), Expect = 1.390e-55
Identity = 88/107 (82.24%), Postives = 98/107 (91.59%), Query Frame = 0
Query:   22 QNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLV 128
            +++Q  L++FW EQ+ EM  LEIGTEQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEK KRRTLQK+DI+AAI+ T+IFDFLV
Sbjct:   25 EHLQKALHQFWMEQIAEMNALEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKMKRRTLQKDDIEAAIKNTEIFDFLV 131          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15538.4122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYP6_ECTSI1.100e-7298.21CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ec... [more]
D7FYP7_ECTSI9.970e-6489.29CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ec... [more]
A0A7S2DIM4_9STRA3.960e-5983.93Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V1P6K4_HETAK1.040e-5883.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K3WAN7_GLOUD1.330e-5887.04CBFD_NFYB_HMF domain-containing protein n=25 Tax=O... [more]
A0A7S2SRM6_9STRA5.090e-5883.64Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W4HC48_9STRA2.420e-5784.68CBFD_NFYB_HMF domain-containing protein n=3 Tax=Sa... [more]
A0A067D1Y5_SAPPC3.430e-5786.11CBFD_NFYB_HMF domain-containing protein n=3 Tax=Sa... [more]
A0A836C8W6_9STRA5.160e-5680.70Histone-fold-containing protein n=1 Tax=Tribonema ... [more]
A0A812R7W0_SYMMI1.390e-5582.24NFYC2 protein n=1 Tax=Symbiodinium microadriaticum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 56..118
e-value: 1.0E-21
score: 76.9
IPR009072Histone-foldGENE3D1.10.20.10coord: 16..132
e-value: 2.0E-40
score: 139.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 27..127
NoneNo IPR availablePANTHERPTHR10252:SF88NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-10-RELATEDcoord: 22..132
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 22..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15538contigEcto-sp13_S_contig15538:513..2115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15538.4122.1mRNA_Ecto-sp13_S_contig15538.4122.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15538 429..3928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15538.4122.1 ID=prot_Ecto-sp13_S_contig15538.4122.1|Name=mRNA_Ecto-sp13_S_contig15538.4122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp
MDTHSNSPPPPRRRFVCFVLLQNMQSQLNRFWAEQMQEMETLEIGTEQDF
KNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCY
SEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003958CBFA_NFYB_domain
IPR009072Histone-fold