mRNA_Ecto-sp13_S_contig1553.4115.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1553.4115.1 vs. uniprot
Match: D8LRU6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU6_ECTSI) HSP 1 Score: 999 bits (2583), Expect = 0.000e+0 Identity = 559/638 (87.62%), Postives = 569/638 (89.18%), Query Frame = 2
Query: 299 MAPPLPKGRSVPLKKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQDPTPSRTPAGGSMVGTPVTVLRSIGESTEGGGLELRVNGGDPEGPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADRPKIGDSRPNQVKTWKHRTRNQLMFSPNLAASNDICRIEQAPTEAAQLLVKDGSTS---TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDEALTATPYQPHQGEPENHSSEPPNAGGSTQRTEMDEPLHCPPRIDSNKGVDDFGSSESRADDPPAPQRPAPPVSRGAVVVKANPKVIQAHATRFPVPAPRKPSRGPWASPIEKPSSSRESVAELLAGTADSSGYEEVPMTPSRVPGVDGDSPQITWGSIDGTPMILDPRATPLPEAGGGTMDVASFMETLGGVVGGVGQQQFEIKDLPPRDKLAHRLEAVDTRRKRAKVGAGAAVDGRGTHTPAPATPMTPQTPGTGRQXXXXXXXXXRGGDTPAKGKGKGKA--AAVTPAARSLAARLAQRQSADTPFGGGLTPGRQRRRTNRSGGGAGANRG 2197
MAPPLPKGRSVPLKKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQD TPSRTPAGGSMVGTPVT LRSIG ST+G GLELRV+GG+ +GPSSS AGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADRPKIGDSRPNQVKTWKHRTRNQLMFSPNLAASNDICRIEQAPTEAAQLLVKDGSTS T XXXXXXXXXXXXXXX SSDEALTATP QPHQGEPE SS PPNAGGSTQRTEMDEPLHCPPR+DSN+GVDDFGSSESRAD+PPAP RPAPPVSRGAVVVKANPKVIQAHATRFPVPAPRKPSRGPWASPIEKPSSSRESVAELLAGTADSSGYEEVPMTPSRVPGVDGDSPQITWGSIDGTPMILDPRATPLPEAG G MDVASFMETLGGVVGGVGQQQFEIKDLP RDKLAHRLEAVDTRRKRAK+GAGAA DGRGTHTPAPATPMTPQTPGTGR+XXXXXXXXXRGG TPAKGKG AAVTPAARSLAARLAQRQS DTPFGGGLTPGRQRRRT+RSGGGAGANRG
Sbjct: 1 MAPPLPKGRSVPLKKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQDTTPSRTPAGGSMVGTPVTGLRSIGGSTDGDGLELRVSGGNSDGPSSSNCAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADRPKIGDSRPNQVKTWKHRTRNQLMFSPNLAASNDICRIEQAPTEAAQLLVKDGSTSATATTKRRVIKQSEEVVKRVARATATSTKESADGDCHSSKSSGATXXXXXXXXXXXXXXXPSSDEALTATPDQPHQGEPEYQSSGPPNAGGSTQRTEMDEPLHCPPRVDSNEGVDDFGSSESRADEPPAPPRPAPPVSRGAVVVKANPKVIQAHATRFPVPAPRKPSRGPWASPIEKPSSSRESVAELLAGTADSSGYEEVPMTPSRVPGVDGDSPQITWGSIDGTPMILDPRATPLPEAGRGAMDVASFMETLGGVVGGVGQQQFEIKDLPARDKLAHRLEAVDTRRKRAKLGAGAAADGRGTHTPAPATPMTPQTPGTGRRXXXXXXXXXRGGRTPAKGKGXXXXXXAAVTPAARSLAARLAQRQSVDTPFGGGLTPGRQRRRTDRSGGGAGANRG 638
BLAST of mRNA_Ecto-sp13_S_contig1553.4115.1 vs. uniprot
Match: A0A225X327_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X327_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.150e-29 Identity = 94/232 (40.52%), Postives = 127/232 (54.74%), Query Frame = 2
Query: 338 KKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQDPTPSRTPAGGSMVGTPVTVLRSIGESTEGGGLEL------RVNGGDPEGPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVKTWKHRTRNQLMFSPNLAASNDICRIEQAPTEAAQLLVKDGS 1012
KK VLEEEEYVD L +IIE D+FP+ K+ R L D P + T + G S+ G G + ++ G P+ K + L +FVATHTSEDNE+F ELQEK + RRY WA+D D +G+ KL +L NG +S E+R D ACA + PK D RP+ +TWK+R RN L+F P L A+ DIC++E P +QLL+++ S
Sbjct: 3 KKVVLEEEEYVDALDQIIERDFFPDLPKLKRQAELLRDEEDLPWTNTTLRAATTQGN-----MSVRSDASGSGWDQPTPMAEQLTGSPVVEPAEDKSQASM-TLNRFVATHTSEDNESFNELQEKAVKDHERRYHWAFD---DKKGD----PKLHLLTNGTWISKEQRLLADKACAPKGPK--DDRPSAPETWKYRARNPLLFPPELEATRDICQVE--PGSKSQLLLENVS 217
BLAST of mRNA_Ecto-sp13_S_contig1553.4115.1 vs. uniprot
Match: A0A2P4YVG3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YVG3_9STRA) HSP 1 Score: 130 bits (327), Expect = 6.590e-29 Identity = 93/241 (38.59%), Postives = 130/241 (53.94%), Query Frame = 2
Query: 338 KKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQD----------------PTPSRTPAGGSMVGTPVTVLRSIGESTEGGGLELRVNGGDPEGPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVKTWKHRTRNQLMFSPNLAASNDICRIEQAPTEAAQLLVKDG 1009
+K VLEEEEYV+ LG+IIE D+FP+ +K+ + L D ++ T R+ A S P L E + G L+ + D S + L +FV THTSEDNEAF ELQEK + RRY WA+D D +G+ KL +L NG +S E+R+ D ACA + PK D RP+ +TWK+R RN L+F P+L + +IC++E P AQLL+++G
Sbjct: 3 RKVVLEEEEYVEALGQIIERDFFPDLSKLKKQSELLRDEEENLPWTDTTLRVASMTRGNTSERSNASDSGWDEPTPTL----EQSTGSPLQDEDHAEDKSRASMT--------LNRFVTTHTSEDNEAFNELQEKTVKDHERRYHWAFD---DKKGD----PKLHLLTNGTWISKEQRQIADKACAPKGPK--DDRPSAPQTWKYRARNPLLFPPDLETTREICQVESGPR--AQLLLENG 220
BLAST of mRNA_Ecto-sp13_S_contig1553.4115.1 vs. uniprot
Match: W2Q457_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2Q457_PHYPN) HSP 1 Score: 129 bits (325), Expect = 1.590e-28 Identity = 93/232 (40.09%), Postives = 129/232 (55.60%), Query Frame = 2
Query: 338 KKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQD-PTPSRTPAGGSMVGTPVTVLRSIGESTEGGGLELRVNGGDPE--GPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAY-DTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVKTWKHRTRNQLMFSPNLAASNDICRIEQAPTEAAQLLVKDGSTS 1018
KK VLEEEEYV+ LG+IIE D+FP+ K+ + L + P T S V+V +I +S + + D + G S A L +FVATHTSEDNE+F ELQEK + +RRY WA+ D G+ KL +L NG +S E+R+ D ACA + PK D RP+ +TWK+R RN L+F P L A+ DIC+++ P + QLL+++ S S
Sbjct: 3 KKVVLEEEEYVEALGQIIERDFFPDLPKLKKQTKLLRGEEEGLPWTDTTLRVASTSRGNVSVWSNISDSGWDQPTPVVEHSADDQVQGEDSDDSAKTSMTLNRFVATHTSEDNESFNELQEKAVKDHQRRYHWAFVDDKEKGD------PKLHLLTNGTWISKEQRQIADEACASKGPK--DYRPSAPETWKYRARNPLLFPPELEATRDICQVKADPGD--QLLLENSSKS 224
BLAST of mRNA_Ecto-sp13_S_contig1553.4115.1 vs. uniprot
Match: D0MY39_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MY39_PHYIT) HSP 1 Score: 127 bits (320), Expect = 4.400e-28 Identity = 93/229 (40.61%), Postives = 127/229 (55.46%), Query Frame = 2
Query: 338 KKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQDPTPSRTPAGGSMVGTPVTVLRSIGESTEGGGLELRVNGG-DPEGPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVKTWKHRTRNQLMFSPNLAASNDICRIEQAPTEAAQLLVKDGSTS 1018
KK VLEE+EYV+ LG+IIE D+FP+ K+ + L D P T S V+V + ES + D +G S+K + L FVATHTSEDNE+F ELQEK + +RRY WA+D D +G+ KL +L NG +S E+R+ DAACA + PK D RP+ +TW +R RN L+F P L A+ DIC++ QLL+++ S S
Sbjct: 3 KKVVLEEDEYVEALGQIIERDFFPDLPKLKKQTELLRDEEGLPWTDTTLRAASTSRGVVSVRSNANESGWDQPTPMVEQYALDEDGHDSTKASM---TLNHFVATHTSEDNESFNELQEKAVKDHQRRYHWAFDDDKD-KGD----PKLHLLTNGTWISKEQRQIADAACAPKGPK--DDRPSAPETWTYRARNPLLFPPELDATRDICQV-------GQLLLENSSKS 214
BLAST of mRNA_Ecto-sp13_S_contig1553.4115.1 vs. uniprot
Match: A0A662XZJ0_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZJ0_9STRA) HSP 1 Score: 133 bits (335), Expect = 6.450e-28 Identity = 92/210 (43.81%), Postives = 120/210 (57.14%), Query Frame = 2
Query: 341 KTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQDPTPSRTPAGGSMVGTPVTVL-RSIGESTEGGGLELRVNGGDPEGPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVKTWKHRTRNQLMFSPNLAASNDICRI 964
K VLEEEEYV+ LGEIIE D+FP+ + R A + P+P+R P + GT V R+ E E +E EG + L +FVATHTSEDNEAF ELQEK E +RRY WA+D DG+G+ KL +L +G +S ++R D ACA + PK D RP+ +TWK R RN L+F P+LA + DICR+
Sbjct: 444 KVVLEEEEYVEALGEIIERDFFPDLPSLKRQTA-VPSGWDQPSPAREP---TASGTNALVRSRTRNEDDEKSAVES-------EGVQNM-------TLNRFVATHTSEDNEAFNELQEKAIEDHQRRYHWAFDDN-DGKGD----PKLHLLTDGTWISKQQRHLADEACAPKGPK--DDRPSAPETWKFRARNPLLFPPDLATARDICRL 628
BLAST of mRNA_Ecto-sp13_S_contig1553.4115.1 vs. uniprot
Match: G4YIQ7_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YIQ7_PHYSP) HSP 1 Score: 127 bits (319), Expect = 7.390e-28 Identity = 94/236 (39.83%), Postives = 123/236 (52.12%), Query Frame = 2
Query: 338 KKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADH-GQDPTPSRTPAGGSMVGTPVTVLRSIGESTEGGGLELRV-NGGDP------EGPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVKTWKHRTRNQLMFSPNLAASNDICRIEQAPTEAAQLLVKDGSTS 1018
KK VLEEEEYVD LG+IIE D+FP+ K+ R L + G P T + G S+ S G G + G+ E ++ DA L FVATHTSEDNE+FAELQEK +RRY WA+D + KL +L NG +S E+R D ACA + PK D RP+ +TW+ R RN L+F P L A+ DIC++ QLL+++G S
Sbjct: 3 KKVVLEEEEYVDALGQIIERDFFPDLPKLKRQTELLREEEGGVPWTDTTLRAANTRGN-----ASVRSSASGTGWDQPTPQSGESAVDATQESDAAEADAKASMTLNHFVATHTSEDNESFAELQEKAVIDHQRRYHWAFD-----DDKKRGDPKLHLLTNGTWISKEQRRIADEACAPKGPK--DDRPSAPETWRFRARNPLLFPPELEATRDICQVRSGN----QLLLENGVKS 222
BLAST of mRNA_Ecto-sp13_S_contig1553.4115.1 vs. uniprot
Match: A0A6A4FV49_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FV49_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.120e-27 Identity = 96/251 (38.25%), Postives = 124/251 (49.40%), Query Frame = 2
Query: 338 KKTVLEEEEYVDRLGEIIEGDYFPNNAKMYR--------------ALAGLADHGQDPTPSRTPAGGSMVGTPVTVLRSIGE-STEGGGLELRVNGGDPEGPSSSKDAGNGGA-----------LTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVKTWKHRTRNQLMFSPNLAASNDICRIEQAPTEAAQLLVKDG 1009
KK VLEEEEYV+ LG+IIE D+FP+ K+ + AL LA R G T + + G S G + P+ S DA + A L FVATHTSEDNE+F ELQ+K + +RRY WAYD + KL +L NG +S E+R D ACA + PK D RP+ +TWK R RN L+F P L A+ DICR+E P QLL+++G
Sbjct: 3 KKVVLEEEEYVEALGQIIERDFFPDLPKLKQQTEVRSIIDSACINALKSLALIASFSCCERRRGGIPWTDTTLQAANARGNFSVRSSGSGTGWDHPTPQSDQSVADANHDNAAAEAEAKASMTLNHFVATHTSEDNESFVELQQKAVKDHQRRYHWAYD-----DDKERGDPKLHLLTNGTWISKEQRRIADQACAPKGPK--DDRPSAPETWKFRARNPLLFPPELEATRDICRVE--PGSGNQLLLENG 244
BLAST of mRNA_Ecto-sp13_S_contig1553.4115.1 vs. uniprot
Match: A0A662XTQ1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XTQ1_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.320e-27 Identity = 90/208 (43.27%), Postives = 118/208 (56.73%), Query Frame = 2
Query: 341 KTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQDPTPSRTPAGGSMVGTPVTVLRSIGESTEGGGLELRVNGGDPEGPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVKTWKHRTRNQLMFSPNLAASNDICR 961
K VLEEEEYV+ LGEIIE D+FP+ + R A L+ Q P+P+R P + R+ E E +E EG + L++FVATHTSEDNEAF ELQEK E +RRY WA+D G+G+ KL +L +G +S ++R D ACA + PK D RP+ +TWK R RN L+F P+LA + DICR
Sbjct: 5 KVVLEEEEYVEALGEIIERDFFPDLPSLKRQTAVLSSWDQ-PSPAREPTANRA--NALVRNRTRSEDDEKSAVES-------EGVQNM-------TLSRFVATHTSEDNEAFNELQEKAIEDHQRRYHWAFDDN-SGKGD----PKLHLLTDGTWISKQQRHLADEACAPKGPK--DDRPSAPETWKFRARNPLLFPPDLATTRDICR 188
BLAST of mRNA_Ecto-sp13_S_contig1553.4115.1 vs. uniprot
Match: A0A329SZM5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SZM5_9STRA) HSP 1 Score: 131 bits (329), Expect = 2.470e-27 Identity = 95/238 (39.92%), Postives = 130/238 (54.62%), Query Frame = 2
Query: 338 KKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADH--GQDPTPSRTPAGGSMVGTPVTVLRSIGESTEGGGLEL--------RVNGGDPEGPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVKTWKHRTRNQLMFSPNLAASNDICRIEQAPTEAAQLLVKDGSTS 1018
KK VLEEEEYV+ LG+IIE D+FP+ K+ + L D G T + A + G S+ G G + ++ EG + A L +FVATHTSEDNE+F ELQEK + +RRY WA+D D E + KL +L NG +S E+R+ D ACA + PK D RP+ +TWK+R RN L+F P L A+ DIC+++ P AQLL+++ S S
Sbjct: 3 KKVVLEEEEYVEALGQIIERDFFPDIPKLKKQTELLRDEEEGLPWTDTTLHAASTSRGN-----ASVRSGASGSGWDQPTPIVEQPAIDQAQDEGADDNAKASM--TLNRFVATHTSEDNESFNELQEKAVKDHQRRYHWAFDN--DKEKGDP---KLHLLTNGTWISKEQRQIADDACAPKGPK--DDRPSAPETWKYRARNPLLFPPELEATRDICQVKADP--GAQLLLENSSKS 224 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1553.4115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1553.4115.1 >prot_Ecto-sp13_S_contig1553.4115.1 ID=prot_Ecto-sp13_S_contig1553.4115.1|Name=mRNA_Ecto-sp13_S_contig1553.4115.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=730bp MTTNMPGDGARPEMITAVGRKFEVATPTTLARLEDPRAWHARGEGGIQRPback to top mRNA from alignment at Ecto-sp13_S_contig1553:12377..15997+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1553.4115.1 ID=mRNA_Ecto-sp13_S_contig1553.4115.1|Name=mRNA_Ecto-sp13_S_contig1553.4115.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3621bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1553:12377..15997+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1553:12377..15997+ >mRNA_Ecto-sp13_S_contig1553.4115.1 ID=mRNA_Ecto-sp13_S_contig1553.4115.1|Name=mRNA_Ecto-sp13_S_contig1553.4115.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2190bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1553:12377..15997+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |