mRNA_Ecto-sp13_S_contig15454.4079.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15454.4079.1 vs. uniprot
Match: A0A6H5KMU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU8_9PHAE) HSP 1 Score: 246 bits (627), Expect = 2.920e-76 Identity = 122/130 (93.85%), Postives = 124/130 (95.38%), Query Frame = 1
Query: 19 SKLRQDALDIALNQVSDVNGWYTSKLQLQLASLQLCLACRGVPTSHLTVERDVLALLWPNSAAEATRSRLVGLGRSRVPALRPRKVTWNLAALSMRHCGDTFESVDVLVFGDSFDYRVDRVTWPPRLKKL 408
SKLRQDALDIALNQVS VNGWYTSKLQLQLASLQLCLACR VPTSHLTVERDVLALLWP+SAAEATRSRLV LG+SRVPALRPRKVTWNLA LSMRHCGD FESVDVLVFGDSFDYRVDRVTWPP LKKL
Sbjct: 12 SKLRQDALDIALNQVSGVNGWYTSKLQLQLASLQLCLACRRVPTSHLTVERDVLALLWPHSAAEATRSRLVSLGQSRVPALRPRKVTWNLATLSMRHCGDAFESVDVLVFGDSFDYRVDRVTWPPGLKKL 141
BLAST of mRNA_Ecto-sp13_S_contig15454.4079.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 3.370e-20 Identity = 57/138 (41.30%), Postives = 77/138 (55.80%), Query Frame = 1
Query: 10 LSGSKLRQDALDIALNQVSDVNGWYTSKLQLQLASLQLCLACRGVPTSHLTVERDVLALLWP-NSAAEATRSRLVGLGR----SRVPALRPRKVTWNLAALSMRHCGDTFESVDVLVFGDSFDYRVDRVTWPPRLKKL 408
++G DA +ALNQ D GWY S QLQL+SL C+ACR VPT HL V+R A L+ + A A R + G + +RVPALR RKVTW L+ + R G SV++ V GD+ + +D W ++ L
Sbjct: 24 IAGPSRCLDAFKVALNQACDGGGWYVSTEQLQLSSLPFCVACRSVPTMHLKVDRSTPARLFSGDDDAAAVRDKGHGSSKRVMAARVPALRARKVTWQLSGETPRCTGVGLSSVELFVLGDAVNDSMDEAVWSDGMRSL 161
BLAST of mRNA_Ecto-sp13_S_contig15454.4079.1 vs. uniprot
Match: D8LCS9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS9_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 5.470e-19 Identity = 60/132 (45.45%), Postives = 70/132 (53.03%), Query Frame = 1
Query: 34 DALDIALNQVSDVNGWYTSKLQLQLASLQLCLACRGVPTSHLTVERDVLALLWPNSAAEATRSRLVGLGRSRVPALRPRKVTWNLAALSMRHCGDTFESVDVLVFGDS-------FDYRVDRVTWPPRLKKL 408
DAL +AL D GWYT QLQLASL C ACR VPT HLTV+ DV A L ++ + G SRVPA RPR VTWN ++R D F V VLV G F+ VD + PP L+ L
Sbjct: 87 DALIVALTNAGDGQGWYTPTTQLQLASLDFCTACRAVPTVHLTVDGDVPARL---------KAGIDNGGASRVPAFRPRCVTWNKPIAALRGEDDVFADVRVLVLGHGLGRVGVRFNRWVDGLQLPPALQDL 209
BLAST of mRNA_Ecto-sp13_S_contig15454.4079.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 2.710e-16 Identity = 54/124 (43.55%), Postives = 69/124 (55.65%), Query Frame = 1
Query: 40 LDIALNQVSDVNGWYTSKLQLQLASLQLCLACRGVPTSHLTVERDVLALLWPNSAAEATRSRLVGLGRSRVPALRPRKVTWNLAALS-MRHCGDTFESVDVLVFGDSFDYRVDRVTWPPRLKKL 408
L +ALN+ D WYTS +LQLASL+LC+ACR T HLTV+ L +AA+A L +RVP LR R+ TWN+ S MR VD L FG +F +D + WP RLK +
Sbjct: 140 LTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLL--AAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTI 261
BLAST of mRNA_Ecto-sp13_S_contig15454.4079.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 3.150e-15 Identity = 55/140 (39.29%), Postives = 72/140 (51.43%), Query Frame = 1
Query: 1 MAFLS--GSKLRQDALDIALNQVSDVNGWYTSKLQLQLASLQLCLACRGVPTSHLTVERDVLALLWPNSAAEATRSRLVGLGRSRVPALRPRKVTWNLAALSMRHC-GDTFESVDVLVFGDSFDYRVDR-VTWPPRLKKL 408
M FL+ G DAL IALNQ S WYTS +QLQLASL+LC +CR + L V+ LW +A + +RVP +R R VTW L L++R+ GD + V G FD + R + WP +L L
Sbjct: 1 MCFLARAGPSRCLDALIIALNQASG-GEWYTSTMQLQLASLELCASCRSMHLLKLNVQHGTPTRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGLALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKLTLL 139
BLAST of mRNA_Ecto-sp13_S_contig15454.4079.1 vs. uniprot
Match: D7G241_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G241_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 3.190e-15 Identity = 56/134 (41.79%), Postives = 70/134 (52.24%), Query Frame = 1
Query: 34 DALDIALNQVSDVNGWYTSKLQLQLASLQLCLACRGVPTSHLTVERDVLALLWPNSAAEATRSRLVG-------LGRSRVPALRPRKVTWNLAALSMRHCG-DTFESVDVLVF-GDSFDYRVDRVTWPPRLKKL 408
+A +AL+ D WY S QLQLASL LC ACRGVPT L+VER LW AA R RL G R+RVP PR+V W L A + + + +V L+F G D+ D +WP LK+L
Sbjct: 14 EAFVVALDLTCDGEKWYASTQQLQLASLDLCKACRGVPTLALSVERSTPEYLWAE-AARGPRGRLTGEKKPPAARTRTRVPPFGPRRVMWKLRARELGLARKELWANVQCLLFTGYHNDWVCDGFSWPTGLKRL 146
BLAST of mRNA_Ecto-sp13_S_contig15454.4079.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 3.230e-15 Identity = 50/126 (39.68%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 34 DALDIALNQVSDVNGWYTSKLQLQLASLQLCLACRGVPTSHLTVERDVLALLWPNSAAEATRSRLVGLGRSRVPALRPRKVTWNL-AALSMRHCGDTFESVDVLVFGDSFDYRVDRVTWPPRLKKL 408
+A+ +AL + D WYTS +LQLASL+ C+ACR T HL V+ + +L +AA+ L R RVP LR R VTWN+ A +R +D L FG +F+ ++ VTWP RL+ +
Sbjct: 38 NAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLL--AAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESI 161
BLAST of mRNA_Ecto-sp13_S_contig15454.4079.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 8.790e-15 Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 1
Query: 34 DALDIALNQVSDVNGWYTSKLQLQLASLQLCLACRGVPTSHLTVERDVLALLWPNSAAEATRSRLVGLGRSRVPALRPRKVTWNL-AALSMRHCGDTFESVDVLVFGDSFDYRVDRVTWPPRLKKL 408
+AL +ALN+ D WYTS +LQLASL C+ACR T HL V+ + L ++A+A L +RVP LR R+VTWN+ A +R ++ L FGD+F ++ V WP L+ +
Sbjct: 53 EALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLL--ASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTM 176
BLAST of mRNA_Ecto-sp13_S_contig15454.4079.1 vs. uniprot
Match: A0A6H5JA08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA08_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 1.040e-13 Identity = 49/124 (39.52%), Postives = 65/124 (52.42%), Query Frame = 1
Query: 34 DALDIALNQVSDVNGWYTSKLQLQLASLQLCLACRGVPTSHLTVERDVLALLWPNSAAEATRSRLVGLGRSRVPALRPRKVTWNLAALSMRHC-GDTFESVDVLVFGDSFDYRVDR-VTWPPRL 399
DAL IALNQ S WYTS +QLQL SL+LC ACR + L V+ LW +A + +RVP +R R VTW L +++R+ GD + V G FD + R + WP +L
Sbjct: 45 DALIIALNQASG-GEWYTSTMQLQLTSLELCAACRSMHLLKLNVQHGTPPRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGVALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKL 167
BLAST of mRNA_Ecto-sp13_S_contig15454.4079.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 2.490e-12 Identity = 54/137 (39.42%), Postives = 74/137 (54.01%), Query Frame = 1
Query: 13 SGSKLRQDALDIALNQVSDVNGWYTSKLQLQLASLQLCLACRGVPTSHLTVE----RDVLALLWPNSAAEATRSRLVGLGRSRVPALRPRKVTWNL-AALSMRHCGDTFESVDVLVFGDSFDYRVDRVTWPPRLKKL 408
SGSK L +ALN++ D WYTS +LQLASL+ CLACR L V+ R++LA A +A R+RVP LR R+V WN+ A +R + V+ L FG F+ ++ V WPP LK++
Sbjct: 16 SGSK----DLILALNEMCDGKRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLA------AVDAPPPHTKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQI 142 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15454.4079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15454.4079.1 >prot_Ecto-sp13_S_contig15454.4079.1 ID=prot_Ecto-sp13_S_contig15454.4079.1|Name=mRNA_Ecto-sp13_S_contig15454.4079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=325bp MAFLSGSKLRQDALDIALNQVSDVNGWYTSKLQLQLASLQLCLACRGVPTback to top mRNA from alignment at Ecto-sp13_S_contig15454:2470..3444- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15454.4079.1 ID=mRNA_Ecto-sp13_S_contig15454.4079.1|Name=mRNA_Ecto-sp13_S_contig15454.4079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=975bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15454:2470..3444- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15454:2470..3444- >mRNA_Ecto-sp13_S_contig15454.4079.1 ID=mRNA_Ecto-sp13_S_contig15454.4079.1|Name=mRNA_Ecto-sp13_S_contig15454.4079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=975bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15454:2470..3444- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |