prot_Ecto-sp13_S_contig1545.4078.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1545.4078.1
Unique Nameprot_Ecto-sp13_S_contig1545.4078.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length110
Homology
BLAST of mRNA_Ecto-sp13_S_contig1545.4078.1 vs. uniprot
Match: D8LNX4_ECTSI (ATP-dependent protease peptidase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNX4_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 3.570e-61
Identity = 101/110 (91.82%), Postives = 104/110 (94.55%), Query Frame = 0
Query:    1 MRQPAAAAVLPFGKSAEGKRMHSSASSGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEGTPILRCLS 110
            MRQPAAA VLPFGKSAE KRMHSSASSGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEG  +  C++
Sbjct:    1 MRQPAAA-VLPFGKSAESKRMHSSASSGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEGQLMNACVA 109          
BLAST of mRNA_Ecto-sp13_S_contig1545.4078.1 vs. uniprot
Match: A0A7S2WBX0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBX0_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.090e-31
Identity = 68/110 (61.82%), Postives = 77/110 (70.00%), Query Frame = 0
Query:    1 MRQPAAAAV-LPFGKSAEGKRMHSSASSGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEGTPILRCL 109
            MRQ  A AV  P G S         A+ G   HGTTILCVRK GKVV++GDGQVSQG MVVKPNA KVR++GDG VL G+AGSTADA TL+ERLE +LEEH G     C+
Sbjct:    3 MRQVLARAVRAPTGLSRAAYSASPVAADGSGRHGTTILCVRKEGKVVVIGDGQVSQGSMVVKPNAKKVRRMGDG-VLVGFAGSTADAFTLLERLEERLEEHPGQLTRACV 111          
BLAST of mRNA_Ecto-sp13_S_contig1545.4078.1 vs. uniprot
Match: A0A1L6JEK3_9SPHN (ATP-dependent protease subunit HslV n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1L6JEK3_9SPHN)

HSP 1 Score: 114 bits (285), Expect = 7.350e-30
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 0
Query:   26 SSGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEG 102
            S  +  HGTTIL VR+NG+VV+ GDGQVSQG  V+KPNA KVR LGDG+V+AG+AG+TADA TL ERLEGKLE H+G
Sbjct:    2 SDNMTWHGTTILSVRRNGRVVIAGDGQVSQGSTVMKPNARKVRPLGDGKVIAGFAGATADAFTLFERLEGKLERHQG 78          
BLAST of mRNA_Ecto-sp13_S_contig1545.4078.1 vs. uniprot
Match: A0A430G3G2_9SPHN (ATP-dependent protease subunit HslV n=1 Tax=Sphingomonas koreensis TaxID=93064 RepID=A0A430G3G2_9SPHN)

HSP 1 Score: 114 bits (285), Expect = 7.350e-30
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 0
Query:   26 SSGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEG 102
            S  +  HGTTIL VR+NG+VV+ GDGQVSQG  V+KPNA KVR LGDG+V+AG+AG+TADA TL ERLEGKLE H+G
Sbjct:    2 SDNMTWHGTTILSVRRNGRVVIAGDGQVSQGSTVMKPNARKVRPLGDGKVIAGFAGATADAFTLFERLEGKLERHQG 78          
BLAST of mRNA_Ecto-sp13_S_contig1545.4078.1 vs. uniprot
Match: A0A2W5A674_9SPHN (HslU--HslV peptidase proteolytic subunit (Fragment) n=1 Tax=Sphingomonas sanxanigenens TaxID=397260 RepID=A0A2W5A674_9SPHN)

HSP 1 Score: 113 bits (283), Expect = 9.540e-30
Identity = 54/77 (70.13%), Postives = 63/77 (81.82%), Query Frame = 0
Query:   26 SSGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEG 102
            S  L+ HGTTIL VRKNGKV+++GDGQVS G  V+KPNA KVR LGDG+V+AG+AG+TADA TL ERLE KLE H G
Sbjct:    2 SDSLKWHGTTILSVRKNGKVIVIGDGQVSMGQTVMKPNARKVRPLGDGKVIAGFAGATADAFTLFERLEAKLERHNG 78          
BLAST of mRNA_Ecto-sp13_S_contig1545.4078.1 vs. uniprot
Match: A0A4Q3A541_9SPHN (ATP-dependent protease subunit HslV (Fragment) n=1 Tax=Sphingomonadales bacterium TaxID=1978525 RepID=A0A4Q3A541_9SPHN)

HSP 1 Score: 109 bits (273), Expect = 9.840e-29
Identity = 52/77 (67.53%), Postives = 62/77 (80.52%), Query Frame = 0
Query:   26 SSGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEG 102
            S  ++ HGTTIL VRK G+V++ GDGQVSQG  V+KPNA KVR LGDG V+AG+AG+TADA TL ERLE KLE H+G
Sbjct:    2 SDKIQWHGTTILSVRKGGRVIIAGDGQVSQGSTVMKPNARKVRPLGDGSVIAGFAGATADAFTLFERLESKLERHQG 78          
BLAST of mRNA_Ecto-sp13_S_contig1545.4078.1 vs. uniprot
Match: A0A2N3PSX7_9PROT (ATP-dependent protease subunit HslV n=2 Tax=Rhodospirillaceae TaxID=41295 RepID=A0A2N3PSX7_9PROT)

HSP 1 Score: 111 bits (277), Expect = 1.090e-28
Identity = 54/78 (69.23%), Postives = 62/78 (79.49%), Query Frame = 0
Query:   32 HGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEGTPILRCL 109
            HGTTIL VRKNGKVV+ GDGQVS GD V+K NA KVR+LGDG V+ G+AG+TADA TL ERLE KLE+H G  I  C+
Sbjct:    8 HGTTILAVRKNGKVVIAGDGQVSLGDTVIKSNARKVRRLGDGSVIGGFAGATADAFTLFERLEAKLEKHPGQLIRACV 85          
BLAST of mRNA_Ecto-sp13_S_contig1545.4078.1 vs. uniprot
Match: A0A430DJ27_9SPHN (ATP-dependent protease subunit HslV n=5 Tax=Sphingomonas TaxID=13687 RepID=A0A430DJ27_9SPHN)

HSP 1 Score: 111 bits (277), Expect = 1.150e-28
Identity = 54/77 (70.13%), Postives = 63/77 (81.82%), Query Frame = 0
Query:   26 SSGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEG 102
            S+ +  HGTTIL VRKNG+VV+ GDGQVSQG  V+KPNA KVR LGDG V+AG+AG+TADA TL ERLE KLE H+G
Sbjct:    2 SNDMVWHGTTILSVRKNGRVVIAGDGQVSQGPTVMKPNARKVRPLGDGSVIAGFAGATADAFTLFERLEAKLERHQG 78          
BLAST of mRNA_Ecto-sp13_S_contig1545.4078.1 vs. uniprot
Match: A0A285QXS2_9SPHN (ATP-dependent protease subunit HslV n=1 Tax=Sphingomonas guangdongensis TaxID=1141890 RepID=A0A285QXS2_9SPHN)

HSP 1 Score: 110 bits (276), Expect = 1.680e-28
Identity = 53/71 (74.65%), Postives = 61/71 (85.92%), Query Frame = 0
Query:   32 HGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEG 102
            HGTTIL VRKNGKVV++GDGQVSQG+ V+KPNA KVR+LGDG V+ G+AG+TADA TL ERLE KLE H G
Sbjct:    8 HGTTILSVRKNGKVVVIGDGQVSQGNTVMKPNARKVRRLGDGSVIGGFAGATADAFTLFERLEAKLERHGG 78          
BLAST of mRNA_Ecto-sp13_S_contig1545.4078.1 vs. uniprot
Match: UPI00143B3045 (ATP-dependent protease subunit HslV n=1 Tax=Sphingomonas jejuensis TaxID=904715 RepID=UPI00143B3045)

HSP 1 Score: 110 bits (276), Expect = 1.680e-28
Identity = 53/77 (68.83%), Postives = 63/77 (81.82%), Query Frame = 0
Query:   26 SSGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEG 102
            S+ +  HGTTIL VRKNG+VV+ GDGQVS G  V+KPNA KVR+LGDG V+AG+AG+TADA TL ERLE KLE+H G
Sbjct:    2 SNEITWHGTTILSVRKNGRVVIAGDGQVSMGQTVIKPNARKVRRLGDGSVIAGFAGATADAFTLFERLERKLEQHHG 78          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1545.4078.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNX4_ECTSI3.570e-6191.82ATP-dependent protease peptidase subunit n=2 Tax=E... [more]
A0A7S2WBX0_9STRA1.090e-3161.82Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1L6JEK3_9SPHN7.350e-3070.13ATP-dependent protease subunit HslV n=6 Tax=Alphap... [more]
A0A430G3G2_9SPHN7.350e-3070.13ATP-dependent protease subunit HslV n=1 Tax=Sphing... [more]
A0A2W5A674_9SPHN9.540e-3070.13HslU--HslV peptidase proteolytic subunit (Fragment... [more]
A0A4Q3A541_9SPHN9.840e-2967.53ATP-dependent protease subunit HslV (Fragment) n=1... [more]
A0A2N3PSX7_9PROT1.090e-2869.23ATP-dependent protease subunit HslV n=2 Tax=Rhodos... [more]
A0A430DJ27_9SPHN1.150e-2870.13ATP-dependent protease subunit HslV n=5 Tax=Sphing... [more]
A0A285QXS2_9SPHN1.680e-2874.65ATP-dependent protease subunit HslV n=1 Tax=Sphing... [more]
UPI00143B30451.680e-2868.83ATP-dependent protease subunit HslV n=1 Tax=Sphing... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 29..109
e-value: 1.6E-27
score: 98.8
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 31..102
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 32..101
e-value: 1.6E-15
score: 57.1
IPR022281ATP-dependent protease, HslV subunitPANTHERPTHR32194FAMILY NOT NAMEDcoord: 21..103
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..110
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 33..110
score: 28.818

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1545contigEcto-sp13_S_contig1545:15193..16570 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1545.4078.1mRNA_Ecto-sp13_S_contig1545.4078.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1545 15193..16570 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1545.4078.1 ID=prot_Ecto-sp13_S_contig1545.4078.1|Name=mRNA_Ecto-sp13_S_contig1545.4078.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=110bp
MRQPAAAAVLPFGKSAEGKRMHSSASSGLEMHGTTILCVRKNGKVVMMGD
GQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEH
EGTPILRCLS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029055Ntn_hydrolases_N
IPR001353Proteasome_sua/b
IPR022281ATP-dep_Prtase_HsIV_su
IPR023333Proteasome_suB-type