mRNA_Ecto-sp13_S_contig15443.4072.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: D7FIZ2_ECTSI (Amidophosphoribosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ2_ECTSI) HSP 1 Score: 477 bits (1228), Expect = 1.550e-162 Identity = 259/288 (89.93%), Postives = 261/288 (90.62%), Query Frame = 1
Query: 343 ARDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSATRHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQ-QQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPVRA 1203
ARDVFG ESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSATRHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLING+GILAFRDPHGVRPLCLGARPGGGG S IXXXXX AAI GMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDA TGSVS+QFCSPRQ QQRSREEGGEKRE EGKESRRA ARFQPCLFEYVYMARPDSIIDGVPV A
Sbjct: 54 ARDVFGVESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSATRHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGYGILAFRDPHGVRPLCLGARPGGGGAGSGIXXXXXXAAIXXXXXXXXXXXXXXGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDASTGSVSSQFCSPRQLQQRSREEGGEKREEEVGEGKESRRAVARFQPCLFEYVYMARPDSIIDGVPVYA 341
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A835YNQ4_9STRA (Amidophosphoribosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNQ4_9STRA) HSP 1 Score: 239 bits (610), Expect = 8.330e-70 Identity = 135/299 (45.15%), Postives = 174/299 (58.19%), Query Frame = 1
Query: 346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSATRHLNTDSDTELLSEIFGMELAARRPAI---------GPPVT------RELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
RD ++M LRG+YGVGHVRYPT+GCN+ EEAQPF +P GF +AHNGH++N LRDQLS + H+NTDSD+E+LS +F ELA P++ G V+ + ++F VV+ VMAR RGGYA + I G G+LAFRDPHG+RP+C+G+RPGGGG +GKMD A ASESAAL G+GF+L+RDV GEAVF + +G++S Q C+ A PC+FEYVYMARPDS++DGV V
Sbjct: 70 RDALPPQTMLSLRGSYGVGHVRYPTAGCNTREEAQPFLMTMPTGFALAHNGHITNVASLRDQLSTSCHINTDSDSEVLSHLFARELAVHWPSLINSSGDGCGGGGVSCSADQAKTVIFDVVRRVMARVRGGYAAVITIKGLGVLAFRDPHGIRPICIGSRPGGGG---------------------------------TGKMDWAFASESAALAGIGFALKRDVKGGEAVFASS-SGAISAQTCA---------------------------APRALSPCIFEYVYMARPDSVLDGVSV 307
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A7S4HRU6_9STRA (Amidophosphoribosyltransferase (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HRU6_9STRA) HSP 1 Score: 202 bits (515), Expect = 2.820e-56 Identity = 122/288 (42.36%), Postives = 153/288 (53.12%), Query Frame = 1
Query: 346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSAT--RHLNTDSDTELLSEIFGMELAAR--RPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
+DVF MA LRG G+GH RYPT+G +S EAQP N P G CVAHNG+L+N L D + T RH+NTDSD+E+L IF + R R A G E +F ++ VM +C+GGYA LING GI+ FRDPHG+RP+ LG+R G+GK+D +ASES A+ LGF+L RDV AGEAVF+D RTG + ++ C P A PC+FEYVY ARPDSI+DGV V
Sbjct: 40 KDVFQTHHMAELRGNVGLGHCRYPTAGSSSCAEAQPLYTNYPHGICVAHNGNLTNTHELTDVVRDTMQRHVNTDSDSEVLLNIFAECMMNRTGRGAAGHGCEAEDVFAAIEGVMEKCKGGYAGAYLINGVGIVGFRDPHGIRPVVLGSRQ---------------------------------SSLGNGKLDYVLASESVAIDTLGFNLERDVRAGEAVFIDMRTGEMQSKICHP---------------------------DASTSPCIFEYVYFARPDSIMDGVSV 267
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A2E9JX74_9GAMM (Amidophosphoribosyltransferase n=2 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2E9JX74_9GAMM) HSP 1 Score: 195 bits (496), Expect = 1.010e-53 Identity = 123/286 (43.01%), Postives = 150/286 (52.45%), Query Frame = 1
Query: 346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSA--TRHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
RDVF M LRG G+GHVRYPT+G +S EAQPF N P G C+AHNG+L+N + L+ L RHLNT SDTE+L +F EL + G +T E +F V V RCRGGYAV V+I GHG++AFRD HG+RP+CLG R EA G+ D VASES A+ LGF + RD+ GEAVF+ A G++ Q C PR A + PCLFEYVY ARPDSIID + V
Sbjct: 52 RDVFHTRHMVRLRGNVGIGHVRYPTAGWSSSAEAQPFYVNSPYGLCLAHNGNLTNAEELKTLLITHDRRHLNTGSDTEVLLNVFADELQHQN---GNGLTPEAVFAAVAGVHRRCRGGYAVVVMIIGHGLVAFRDTHGIRPICLGRR---------------------EADNGN---------------DYMVASESVAMDALGFEVERDIEPGEAVFIQA-DGTLHQQQCMPR---------------------------AGYTPCLFEYVYFARPDSIIDRISV 270
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A382F4C4_9ZZZZ (Amidophosphoribosyltransferase (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382F4C4_9ZZZZ) HSP 1 Score: 191 bits (484), Expect = 3.480e-53 Identity = 121/286 (42.31%), Postives = 153/286 (53.50%), Query Frame = 1
Query: 346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSAT--RHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
RDVF M LRG G+GHVRYPT+GC+S EAQPF N P G C+ HNG+L+N L++ L + RHLNT SDTE L +F EL +P G +T + +FQ V+ V RCRGGYAV +I GHGI+AFRDPHG+RP+ LG R V+G+ R VASES A+ LGF L RD+ GEAVF+ A G + ++ C GE+R + PC+FE+VY ARPDSIID + V
Sbjct: 52 RDVFQQRHMTRLRGNVGIGHVRYPTAGCSSAAEAQPFYVNSPYGICLGHNGNLTNNAELQEMLVSQDKRHLNTGSDTEALLNVFAHELQ-NQP--GAELTPDAIFQAVEGVHRRCRGGYAVVAMIIGHGIVAFRDPHGIRPIALGRRES-----------------------------VNGIER-------IVASESVAMDALGFELERDILPGEAVFI-AGDGQLHSKQC------------GERR---------------GYTPCVFEFVYFARPDSIIDRISV 270
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A7S4QNZ0_9STRA (Amidophosphoribosyltransferase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QNZ0_9STRA) HSP 1 Score: 191 bits (484), Expect = 1.370e-51 Identity = 117/286 (40.91%), Postives = 147/286 (51.40%), Query Frame = 1
Query: 346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRD--QLSATRHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
+DVF M LRG G+GHVRYPT+G +S EAQP N P G CVAHNG+L N L + + RH+NTDSD+ELL IF L A + +F VQAVM+ C+GGYA LING G++ FRDPHG+RPL G R + + + A M G++D A++SES A+ LGF+L RDV AGEA+F+D RTG + C PC+FEYVY ARPDSI+DGV V
Sbjct: 55 KDVFQTRHMMELRGNVGLGHVRYPTAGSSSCAEAQPLYTNYPHGICVAHNGNLVNTPELEEMCRTKLNRHVNTDSDSELLLNIFATNLVT---ASDSEDMVDTVFSAVQAVMSTCKGGYAGLYLINGVGLVGFRDPHGIRPLVFGTRKSS--LAAPVSAVPATPAK---------------MNNAKGRLDYALSSESVAIDTLGFNLVRDVKAGEAIFIDMRTGDCHTRICHNE---------------------------PSLAPCIFEYVYFARPDSIMDGVSV 293
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: UPI001907E18A (amidophosphoribosyltransferase n=1 Tax=Halorhodospira abdelmalekii TaxID=421629 RepID=UPI001907E18A) HSP 1 Score: 189 bits (480), Expect = 1.730e-51 Identity = 113/287 (39.37%), Postives = 145/287 (50.52%), Query Frame = 1
Query: 346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSAT--RHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPVR 1200
RDVF M L G G+GHVRYPT+GC S EAQPF N P G +AHNG+L+N + L+++L T RH+NT+SD+E+L +F EL AR P LF V+AV RC G YA V+INGHGILAFRDP+G+RPLC G R GK + VASES A+ LGF L R++ GEA+F G + + C+ + PC+FE+VY++RPDSI+DGV V
Sbjct: 52 RDVFRTRHMLRLTGTMGIGHVRYPTAGCESSAEAQPFYVNSPYGIALAHNGNLTNAEALKEELFRTDRRHINTNSDSEILLNVFAHELGARNRLQLTPAD---LFAAVRAVHRRCHGAYAAAVMINGHGILAFRDPYGIRPLCYGERVNQ-----------------------------------QGKREYLVASESVAMDMLGFDLVREIAPGEAIFFSG-DGELHTEQCAE---------------------------SPTYSPCIFEFVYLSRPDSIVDGVAVH 272
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A1F9NGK5_9DELT (Amidophosphoribosyltransferase (Fragment) n=1 Tax=Desulfobacterales bacterium GWB2_56_26 TaxID=1797913 RepID=A0A1F9NGK5_9DELT) HSP 1 Score: 188 bits (477), Expect = 1.750e-51 Identity = 118/299 (39.46%), Postives = 148/299 (49.50%), Query Frame = 1
Query: 307 MHDAIAHVSVLQARDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSAT--RHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
+H H RDVF + L GA G+GHVRYPT+G +S EAQPF N P G +AHNG+L+N L+ +L RH+NTDSD+E+L IF EL G P T E +FQ V V RCRGGYAV +INGHG++AFRDPHG+RP+ +G R R + + +ASES L LG+ L D+ AGEAVF+D + + CS AR PC+FEYVY+ARPDSIIDG V
Sbjct: 12 LHKMFFHKENGLVRDVFQPRDLTRLIGAMGIGHVRYPTAGSHSALEAQPFYVNSPYGIALAHNGNLTNAHQLKRELFQVDRRHINTDSDSEVLLNIFAHEL---HKTSGTPFTAETVFQAVSGVHRRCRGGYAVVAMINGHGLVAFRDPHGIRPVVIGER------------------------------------RVTAGPEYMIASESCVLDVLGYQLVGDLEAGEAVFIDMHN-ILHRRRCSEE---------------------------ARLSPCIFEYVYLARPDSIIDGTSV 243
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A1R7QC84_ACIJO (Amidophosphoribosyltransferase n=87 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1R7QC84_ACIJO) HSP 1 Score: 189 bits (479), Expect = 2.670e-51 Identity = 110/286 (38.46%), Postives = 152/286 (53.15%), Query Frame = 1
Query: 346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSAT--RHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
RDVF M L+G YG+GHVRYPT+G +S EAQPF N P G +AHNG+L+N + + D L T RH+NTDSD+E+L +F EL +R + P T + +F VV V RC+GGYAV ++ GHG++ FRDP+G+RPL G+R G M+ +ASES A+T LGF + RD+ GEA+F+D++ G + + C+ ++PC+FEYVY ARPD+IIDG+ V
Sbjct: 52 RDVFHTRHMRALQGNYGIGHVRYPTAGSSSSAEAQPFYVNSPYGITLAHNGNLTNAEEIHDDLFKTDLRHMNTDSDSEVLLNVFAHELQ-KRGKLMP--TADDIFHVVSKVHERCKGGYAVVAMLTGHGLVGFRDPNGIRPLIYGSRETDAG------------------------------------MEYIIASESVAITALGFKVERDIAPGEAIFIDSQ-GQMFTKQCAE---------------------------APEYRPCIFEYVYFARPDAIIDGISV 270
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A7C5GKP7_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7C5GKP7_9GAMM) HSP 1 Score: 187 bits (475), Expect = 9.920e-51 Identity = 118/287 (41.11%), Postives = 146/287 (50.87%), Query Frame = 1
Query: 346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNG-QLLRDQLSAT-RHLNTDSDTELLSEIFGMELAARRPAIGP-PVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
RDVF M L G G+GHVRYPT+GC+S EAQPF N P G C+AHNG+L+N QL RD RH+NTDSD+E+L +F EL IG +T E +F+ V V RCRG YAV LI G+G++ FRDPHG+RP+ G R G GG + +ASES AL LG+ L RDVG GEAVF+ + G + + C+ A PCLFE+VY+ARPDSIID V V
Sbjct: 52 RDVFHTRHMLRLEGNVGIGHVRYPTAGCSSSAEAQPFYVNSPFGICLAHNGNLTNAAQLKRDLFREDLRHINTDSDSEILLNVFAHELQR----IGKHAITHEDIFEAVAGVHRRCRGAYAVVALITGYGVVGFRDPHGIRPMVFGRREGPGGP------------------------------------EYMIASESVALDVLGYELIRDVGPGEAVFI-SENGELHTRQCAE---------------------------NAELAPCLFEFVYLARPDSIIDNVSV 270 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15443.4072.1 >prot_Ecto-sp13_S_contig15443.4072.1 ID=prot_Ecto-sp13_S_contig15443.4072.1|Name=mRNA_Ecto-sp13_S_contig15443.4072.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=299bp MHDAIAHVSVLQARDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFback to top mRNA from alignment at Ecto-sp13_S_contig15443:1183..4089+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15443.4072.1 ID=mRNA_Ecto-sp13_S_contig15443.4072.1|Name=mRNA_Ecto-sp13_S_contig15443.4072.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2907bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15443:1183..4089+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15443:1183..4089+ >mRNA_Ecto-sp13_S_contig15443.4072.1 ID=mRNA_Ecto-sp13_S_contig15443.4072.1|Name=mRNA_Ecto-sp13_S_contig15443.4072.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=897bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15443:1183..4089+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |