mRNA_Ecto-sp13_S_contig15443.4072.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15443.4072.1
Unique NamemRNA_Ecto-sp13_S_contig15443.4072.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: D7FIZ2_ECTSI (Amidophosphoribosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ2_ECTSI)

HSP 1 Score: 477 bits (1228), Expect = 1.550e-162
Identity = 259/288 (89.93%), Postives = 261/288 (90.62%), Query Frame = 1
Query:  343 ARDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSATRHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQ-QQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPVRA 1203
            ARDVFG ESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSATRHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLING+GILAFRDPHGVRPLCLGARPGGGG  S IXXXXX AAI              GMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDA TGSVS+QFCSPRQ QQRSREEGGEKRE    EGKESRRA ARFQPCLFEYVYMARPDSIIDGVPV A
Sbjct:   54 ARDVFGVESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSATRHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGYGILAFRDPHGVRPLCLGARPGGGGAGSGIXXXXXXAAIXXXXXXXXXXXXXXGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDASTGSVSSQFCSPRQLQQRSREEGGEKREEEVGEGKESRRAVARFQPCLFEYVYMARPDSIIDGVPVYA 341          
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A835YNQ4_9STRA (Amidophosphoribosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNQ4_9STRA)

HSP 1 Score: 239 bits (610), Expect = 8.330e-70
Identity = 135/299 (45.15%), Postives = 174/299 (58.19%), Query Frame = 1
Query:  346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSATRHLNTDSDTELLSEIFGMELAARRPAI---------GPPVT------RELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
            RD    ++M  LRG+YGVGHVRYPT+GCN+ EEAQPF   +P GF +AHNGH++N   LRDQLS + H+NTDSD+E+LS +F  ELA   P++         G  V+      + ++F VV+ VMAR RGGYA  + I G G+LAFRDPHG+RP+C+G+RPGGGG                                 +GKMD A ASESAAL G+GF+L+RDV  GEAVF  + +G++S Q C+                           A     PC+FEYVYMARPDS++DGV V
Sbjct:   70 RDALPPQTMLSLRGSYGVGHVRYPTAGCNTREEAQPFLMTMPTGFALAHNGHITNVASLRDQLSTSCHINTDSDSEVLSHLFARELAVHWPSLINSSGDGCGGGGVSCSADQAKTVIFDVVRRVMARVRGGYAAVITIKGLGVLAFRDPHGIRPICIGSRPGGGG---------------------------------TGKMDWAFASESAALAGIGFALKRDVKGGEAVFASS-SGAISAQTCA---------------------------APRALSPCIFEYVYMARPDSVLDGVSV 307          
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A7S4HRU6_9STRA (Amidophosphoribosyltransferase (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HRU6_9STRA)

HSP 1 Score: 202 bits (515), Expect = 2.820e-56
Identity = 122/288 (42.36%), Postives = 153/288 (53.12%), Query Frame = 1
Query:  346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSAT--RHLNTDSDTELLSEIFGMELAAR--RPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
            +DVF    MA LRG  G+GH RYPT+G +S  EAQP   N P G CVAHNG+L+N   L D +  T  RH+NTDSD+E+L  IF   +  R  R A G     E +F  ++ VM +C+GGYA   LING GI+ FRDPHG+RP+ LG+R                                     G+GK+D  +ASES A+  LGF+L RDV AGEAVF+D RTG + ++ C P                            A   PC+FEYVY ARPDSI+DGV V
Sbjct:   40 KDVFQTHHMAELRGNVGLGHCRYPTAGSSSCAEAQPLYTNYPHGICVAHNGNLTNTHELTDVVRDTMQRHVNTDSDSEVLLNIFAECMMNRTGRGAAGHGCEAEDVFAAIEGVMEKCKGGYAGAYLINGVGIVGFRDPHGIRPVVLGSRQ---------------------------------SSLGNGKLDYVLASESVAIDTLGFNLERDVRAGEAVFIDMRTGEMQSKICHP---------------------------DASTSPCIFEYVYFARPDSIMDGVSV 267          
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A2E9JX74_9GAMM (Amidophosphoribosyltransferase n=2 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2E9JX74_9GAMM)

HSP 1 Score: 195 bits (496), Expect = 1.010e-53
Identity = 123/286 (43.01%), Postives = 150/286 (52.45%), Query Frame = 1
Query:  346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSA--TRHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
            RDVF    M  LRG  G+GHVRYPT+G +S  EAQPF  N P G C+AHNG+L+N + L+  L     RHLNT SDTE+L  +F  EL  +    G  +T E +F  V  V  RCRGGYAV V+I GHG++AFRD HG+RP+CLG R                     EA  G+               D  VASES A+  LGF + RD+  GEAVF+ A  G++  Q C PR                           A + PCLFEYVY ARPDSIID + V
Sbjct:   52 RDVFHTRHMVRLRGNVGIGHVRYPTAGWSSSAEAQPFYVNSPYGLCLAHNGNLTNAEELKTLLITHDRRHLNTGSDTEVLLNVFADELQHQN---GNGLTPEAVFAAVAGVHRRCRGGYAVVVMIIGHGLVAFRDTHGIRPICLGRR---------------------EADNGN---------------DYMVASESVAMDALGFEVERDIEPGEAVFIQA-DGTLHQQQCMPR---------------------------AGYTPCLFEYVYFARPDSIIDRISV 270          
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A382F4C4_9ZZZZ (Amidophosphoribosyltransferase (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382F4C4_9ZZZZ)

HSP 1 Score: 191 bits (484), Expect = 3.480e-53
Identity = 121/286 (42.31%), Postives = 153/286 (53.50%), Query Frame = 1
Query:  346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSAT--RHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
            RDVF    M  LRG  G+GHVRYPT+GC+S  EAQPF  N P G C+ HNG+L+N   L++ L +   RHLNT SDTE L  +F  EL   +P  G  +T + +FQ V+ V  RCRGGYAV  +I GHGI+AFRDPHG+RP+ LG R                               V+G+ R        VASES A+  LGF L RD+  GEAVF+ A  G + ++ C            GE+R                + PC+FE+VY ARPDSIID + V
Sbjct:   52 RDVFQQRHMTRLRGNVGIGHVRYPTAGCSSAAEAQPFYVNSPYGICLGHNGNLTNNAELQEMLVSQDKRHLNTGSDTEALLNVFAHELQ-NQP--GAELTPDAIFQAVEGVHRRCRGGYAVVAMIIGHGIVAFRDPHGIRPIALGRRES-----------------------------VNGIER-------IVASESVAMDALGFELERDILPGEAVFI-AGDGQLHSKQC------------GERR---------------GYTPCVFEFVYFARPDSIIDRISV 270          
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A7S4QNZ0_9STRA (Amidophosphoribosyltransferase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QNZ0_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.370e-51
Identity = 117/286 (40.91%), Postives = 147/286 (51.40%), Query Frame = 1
Query:  346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRD--QLSATRHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
            +DVF    M  LRG  G+GHVRYPT+G +S  EAQP   N P G CVAHNG+L N   L +  +    RH+NTDSD+ELL  IF   L     A       + +F  VQAVM+ C+GGYA   LING G++ FRDPHG+RPL  G R       + +     + A                M    G++D A++SES A+  LGF+L RDV AGEA+F+D RTG    + C                                  PC+FEYVY ARPDSI+DGV V
Sbjct:   55 KDVFQTRHMMELRGNVGLGHVRYPTAGSSSCAEAQPLYTNYPHGICVAHNGNLVNTPELEEMCRTKLNRHVNTDSDSELLLNIFATNLVT---ASDSEDMVDTVFSAVQAVMSTCKGGYAGLYLINGVGLVGFRDPHGIRPLVFGTRKSS--LAAPVSAVPATPAK---------------MNNAKGRLDYALSSESVAIDTLGFNLVRDVKAGEAIFIDMRTGDCHTRICHNE---------------------------PSLAPCIFEYVYFARPDSIMDGVSV 293          
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: UPI001907E18A (amidophosphoribosyltransferase n=1 Tax=Halorhodospira abdelmalekii TaxID=421629 RepID=UPI001907E18A)

HSP 1 Score: 189 bits (480), Expect = 1.730e-51
Identity = 113/287 (39.37%), Postives = 145/287 (50.52%), Query Frame = 1
Query:  346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSAT--RHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPVR 1200
            RDVF    M  L G  G+GHVRYPT+GC S  EAQPF  N P G  +AHNG+L+N + L+++L  T  RH+NT+SD+E+L  +F  EL AR      P     LF  V+AV  RC G YA  V+INGHGILAFRDP+G+RPLC G R                                       GK +  VASES A+  LGF L R++  GEA+F     G +  + C+                               + PC+FE+VY++RPDSI+DGV V 
Sbjct:   52 RDVFRTRHMLRLTGTMGIGHVRYPTAGCESSAEAQPFYVNSPYGIALAHNGNLTNAEALKEELFRTDRRHINTNSDSEILLNVFAHELGARNRLQLTPAD---LFAAVRAVHRRCHGAYAAAVMINGHGILAFRDPYGIRPLCYGERVNQ-----------------------------------QGKREYLVASESVAMDMLGFDLVREIAPGEAIFFSG-DGELHTEQCAE---------------------------SPTYSPCIFEFVYLSRPDSIVDGVAVH 272          
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A1F9NGK5_9DELT (Amidophosphoribosyltransferase (Fragment) n=1 Tax=Desulfobacterales bacterium GWB2_56_26 TaxID=1797913 RepID=A0A1F9NGK5_9DELT)

HSP 1 Score: 188 bits (477), Expect = 1.750e-51
Identity = 118/299 (39.46%), Postives = 148/299 (49.50%), Query Frame = 1
Query:  307 MHDAIAHVSVLQARDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSAT--RHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
            +H    H      RDVF    +  L GA G+GHVRYPT+G +S  EAQPF  N P G  +AHNG+L+N   L+ +L     RH+NTDSD+E+L  IF  EL       G P T E +FQ V  V  RCRGGYAV  +INGHG++AFRDPHG+RP+ +G R                                    R +   +  +ASES  L  LG+ L  D+ AGEAVF+D     +  + CS                             AR  PC+FEYVY+ARPDSIIDG  V
Sbjct:   12 LHKMFFHKENGLVRDVFQPRDLTRLIGAMGIGHVRYPTAGSHSALEAQPFYVNSPYGIALAHNGNLTNAHQLKRELFQVDRRHINTDSDSEVLLNIFAHEL---HKTSGTPFTAETVFQAVSGVHRRCRGGYAVVAMINGHGLVAFRDPHGIRPVVIGER------------------------------------RVTAGPEYMIASESCVLDVLGYQLVGDLEAGEAVFIDMHN-ILHRRRCSEE---------------------------ARLSPCIFEYVYLARPDSIIDGTSV 243          
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A1R7QC84_ACIJO (Amidophosphoribosyltransferase n=87 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1R7QC84_ACIJO)

HSP 1 Score: 189 bits (479), Expect = 2.670e-51
Identity = 110/286 (38.46%), Postives = 152/286 (53.15%), Query Frame = 1
Query:  346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNGQLLRDQLSAT--RHLNTDSDTELLSEIFGMELAARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
            RDVF    M  L+G YG+GHVRYPT+G +S  EAQPF  N P G  +AHNG+L+N + + D L  T  RH+NTDSD+E+L  +F  EL  +R  + P  T + +F VV  V  RC+GGYAV  ++ GHG++ FRDP+G+RPL  G+R    G                                    M+  +ASES A+T LGF + RD+  GEA+F+D++ G +  + C+                               ++PC+FEYVY ARPD+IIDG+ V
Sbjct:   52 RDVFHTRHMRALQGNYGIGHVRYPTAGSSSSAEAQPFYVNSPYGITLAHNGNLTNAEEIHDDLFKTDLRHMNTDSDSEVLLNVFAHELQ-KRGKLMP--TADDIFHVVSKVHERCKGGYAVVAMLTGHGLVGFRDPNGIRPLIYGSRETDAG------------------------------------MEYIIASESVAITALGFKVERDIAPGEAIFIDSQ-GQMFTKQCAE---------------------------APEYRPCIFEYVYFARPDAIIDGISV 270          
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Match: A0A7C5GKP7_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7C5GKP7_9GAMM)

HSP 1 Score: 187 bits (475), Expect = 9.920e-51
Identity = 118/287 (41.11%), Postives = 146/287 (50.87%), Query Frame = 1
Query:  346 RDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPFRNNVPVGFCVAHNGHLSNG-QLLRDQLSAT-RHLNTDSDTELLSEIFGMELAARRPAIGP-PVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGVRPLCLGARPGGGGXXSXIXXXXXSAAIGGEAIGGDGGIGVDGMRRGSGKMDLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRSREEGGEKREXXXXEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPV 1197
            RDVF    M  L G  G+GHVRYPT+GC+S  EAQPF  N P G C+AHNG+L+N  QL RD      RH+NTDSD+E+L  +F  EL      IG   +T E +F+ V  V  RCRG YAV  LI G+G++ FRDPHG+RP+  G R G GG                                     +  +ASES AL  LG+ L RDVG GEAVF+ +  G +  + C+                             A   PCLFE+VY+ARPDSIID V V
Sbjct:   52 RDVFHTRHMLRLEGNVGIGHVRYPTAGCSSSAEAQPFYVNSPFGICLAHNGNLTNAAQLKRDLFREDLRHINTDSDSEILLNVFAHELQR----IGKHAITHEDIFEAVAGVHRRCRGAYAVVALITGYGVVGFRDPHGIRPMVFGRREGPGGP------------------------------------EYMIASESVALDVLGYELIRDVGPGEAVFI-SENGELHTRQCAE---------------------------NAELAPCLFEFVYLARPDSIIDNVSV 270          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15443.4072.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIZ2_ECTSI1.550e-16289.93Amidophosphoribosyltransferase n=2 Tax=Ectocarpus ... [more]
A0A835YNQ4_9STRA8.330e-7045.15Amidophosphoribosyltransferase n=1 Tax=Tribonema m... [more]
A0A7S4HRU6_9STRA2.820e-5642.36Amidophosphoribosyltransferase (Fragment) n=1 Tax=... [more]
A0A2E9JX74_9GAMM1.010e-5343.01Amidophosphoribosyltransferase n=2 Tax=Chromatiale... [more]
A0A382F4C4_9ZZZZ3.480e-5342.31Amidophosphoribosyltransferase (Fragment) n=1 Tax=... [more]
A0A7S4QNZ0_9STRA1.370e-5140.91Amidophosphoribosyltransferase n=2 Tax=Ditylum bri... [more]
UPI001907E18A1.730e-5139.37amidophosphoribosyltransferase n=1 Tax=Halorhodosp... [more]
A0A1F9NGK5_9DELT1.750e-5139.46Amidophosphoribosyltransferase (Fragment) n=1 Tax=... [more]
A0A1R7QC84_ACIJO2.670e-5138.46Amidophosphoribosyltransferase n=87 Tax=Gammaprote... [more]
A0A7C5GKP7_9GAMM9.920e-5141.11Amidophosphoribosyltransferase n=1 Tax=Thiotrichal... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15443contigEcto-sp13_S_contig15443:1183..4089 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score477.2
Seed ortholog evalue5.4e-132
Seed eggNOG ortholog2880.D7FIZ2
Preferred nameADE4
Model size1203
KEGG rclassRC00010,RC02724,RC02752
KEGG koko:K00764
KEGG ReactionR01072
KEGG Pathwayko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130
KEGG ModuleM00048
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004044,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042440,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046083,GO:0046112,GO:0046148,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons4
EggNOG free text desc.amidophosphoribosyltransferase activity
EggNOG OGsCOG0034@1,KOG0572@2759
Ec32 ortholog descriptionAmidophosphoribosyltransferase
Ec32 orthologEc-07_005050.1
EC2.4.2.14
Cds size897
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462820.4468777-UTR-Ecto-sp13_S_contig15443:1182..14881681462820.4468777-UTR-Ecto-sp13_S_contig15443:1182..1488Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15443 1183..1488 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462820.46009-CDS-Ecto-sp13_S_contig15443:1488..16321681462820.46009-CDS-Ecto-sp13_S_contig15443:1488..1632Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15443 1489..1632 +
1681462820.4708138-CDS-Ecto-sp13_S_contig15443:2268..23491681462820.4708138-CDS-Ecto-sp13_S_contig15443:2268..2349Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15443 2269..2349 +
1681462820.4810207-CDS-Ecto-sp13_S_contig15443:3050..31851681462820.4810207-CDS-Ecto-sp13_S_contig15443:3050..3185Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15443 3051..3185 +
1681462820.4910302-CDS-Ecto-sp13_S_contig15443:3552..40891681462820.4910302-CDS-Ecto-sp13_S_contig15443:3552..4089Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15443 3553..4089 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15443.4072.1prot_Ecto-sp13_S_contig15443.4072.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15443 1489..4089 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15443.4072.1

>prot_Ecto-sp13_S_contig15443.4072.1 ID=prot_Ecto-sp13_S_contig15443.4072.1|Name=mRNA_Ecto-sp13_S_contig15443.4072.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=299bp
MHDAIAHVSVLQARDVFGAESMAGLRGAYGVGHVRYPTSGCNSVEEAQPF
RNNVPVGFCVAHNGHLSNGQLLRDQLSATRHLNTDSDTELLSEIFGMELA
ARRPAIGPPVTRELLFQVVQAVMARCRGGYAVTVLINGHGILAFRDPHGV
RPLCLGARPGGGGGGSGIGSGGGSAAIGGEAIGGDGGIGVDGMRRGSGKM
DLAVASESAALTGLGFSLRRDVGAGEAVFLDARTGSVSNQFCSPRQQQRS
REEGGEKREEEGGEGKESRRAGARFQPCLFEYVYMARPDSIIDGVPVRA
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mRNA from alignment at Ecto-sp13_S_contig15443:1183..4089+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15443.4072.1 ID=mRNA_Ecto-sp13_S_contig15443.4072.1|Name=mRNA_Ecto-sp13_S_contig15443.4072.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2907bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15443:1183..4089+ (Ectocarpus species13 EcNAP12_S_4_19m)
GATGAAACAGCTTTGGGATGGACGATGTCACCTACTGCTCCAGGAGTGGT AGACGTCGCTGTCTTACTTAAGCGTGTAGATTATCAGGAATCCGTTCGTG ATGAAAACGACGCCGAGATGTGTTGTGTGTTTTTGTAATTTTGTATTTGT TGTATTCCTCCTAAACGGAACACTGTACTATCGCCCGCGATATGTTACAC GGTGCGACATATTTCGGTGTGTGTAGTACCGAACTGGTGGGCACGGCACG GCAGGTATGATAACGGTACTGTCTGCTGCTGCTGCTGCTGCTGCACATGC AGTGTCATGCATGACGCCATAGCGCACGTGTCGGTGCTGCAGGCTCGAGA CGTTTTTGGCGCGGAGAGCATGGCGGGCTTGCGTGGAGCCTACGGCGTGG GACACGTGCGCTACCCCACGAGTGGCTGCAACAGCGTCGAGGAGGCACAG GTGAGCAGGCATATATTTTTCGTATTCCATACGTGCTGCGCCTCTATTGC TTGTAGGTTCCTGTCGTGGGGTCATCGCCGGGTGTCGTGTAGCACTGCTA GTGCTGGTGCTAGATTTCTCTTGTATTTAGAAGCGTTTATCCTCGCCTTG GAAACGATCACTTATGTTGTTCAGACGGTTGCGAAGAGGATTGCGTCTTG CTTGATGAACGCTTCTCTGATGTATCCACAGCCTTTGTGTGGTCGAGAGT GCTTTTACGCCGTGTAATGCGCATAGTGAGGTACACAACTGACGCATGTG TGCCATAAACGCGCACCAAAAGTGTGTCGAGTGCTGTAGAAAGGGATGCA ATCACATAGCAGCATAGCAGCCGTAGCTTGAGAGAGGTAGGGCCATCGAT GCTGCCGTCAAAGGTCTGCATGTCTAATAGTTGCTAACTGCCAAGGCCTC AAGTACATCATCGGGGTATGACGTTTTTTGCACCGCAGCAAGTCGTCGAA ATAGGCTCAAGGTAATCAAGGTTCCGAGTCTCATAGTAGGCTTAGACAAA ACGGATTTCGAAGAACCATACAAAGTAGCATCGGCTCGGGCTGACTCGTC CGCCCCCTCTATTTGTTGTCCTGTAAACGCCGACAGCCTTTCCGGAACAA CGTCCCAGTGGGATTTTGCGTTGCGCACAACGGCCACCTGAGCAATGGCC AGCTGTTGAGAGACCAGGTGCGCTTGAAGTTATCCGCACGCGCGAACACC CGCCGACTTGTGTGCGTTTATCGAAGTGTCTATCCAAAAGCAACGTGCCC TTTGAAGTGTGTGCGTGATAGTCATCTGGTTCTGAATGCGCCGGAAGGGA AGTTCAACATGACTTTACACTGTAGCTCTCTAGCGGGGGGGCTTGCGGGG TTGCATGATCGCTATCGTAGGCCCAAACGCACCAGAACGGGTCGCCCAAA AAAGAGGGTGAGGGGCTGAGCATGTTCGCGGTAGCCACTCCAAGAACTCC AATTCTTCATCCATGCCGCCCCCACTCTACATGTATCGCCAACGGCGGTT CTTGGGGGCTTGTGCATGCATGATCAGCATCAATTGCCCGTCCCATTTTC CGTTTCAGTTTTCCTAGCACACGTGTCATTTCGACTCGGCGAGCAGGCTG TGTGCGTGGTAACACGAGTTCTCGGATATATCTTCAGTATTTGGGATACG AGCCCTGCGTCTGTGTCCACTTTTCTCGCTTAAATTACGCTCCGATACTC TCGTGTTTGAGCTGTCCACTTTGCGGTAGGTGTTTGTGTGTGCATACGCC GAAGCTCGGTGTGTTGATGGAACTTTTTTTTTTTCCCGTAACGTTGAACC CAGTTCTCGTTCTGCGCGCCCCGCGCTGGACGCATGCACTACTGCTATTC GCATTCAATCCGTTTCAGCTATCGGCCACTCGGCACCTTAACACGGACTC GGACACGGAACTCTTGTCGGAGATATTCGGCATGGAGCTGGCAGCTAGGA GGCCAGCGATCGGACCGCCAGTAACCCGAGAGCTTCTCTTCCAAGTTGTT CAGGTGTTTGCCCTTAATTTGACGGTTTTGACGAATCTGTATCCTGGAGG TTAGTACTTGCTCTTGTATGGGATGTGCACACACCACTAAACGAAAAAGG CGACGGTCTCGTCGCTCTCCTCGCTCACGTCCACACTGATGTGCAACGGA AGCATTCATCGGGTCAGCCTTGCCGTTTTCTCCAAAACAGTGCCAGAATA TTTTCTCGTTTCTTGGGTGTGCACGAAACGGAAATCGACAACCAACAAGG GTACCGACAACCTCACGTCCGGCGACTGTTTCCCAACTACCCCGCGCCCT GCCGATACCCAACCAAATGGATGTGTTCTGGTCGCACGTTTCACATCATG ACATCGTACACCTACCCTAGGCGGTAATGGCCCGATGTCGAGGCGGCTAC GCGGTAACGGTGCTGATCAACGGGCACGGCATCTTGGCCTTCCGCGACCC CCACGGAGTTCGACCCTTGTGTCTCGGGGCGCGCCCGGGAGGGGGCGGGG GGGGTAGCGGGATCGGCAGCGGCGGTGGCTCCGCCGCAATTGGAGGGGAA GCTATCGGCGGTGATGGAGGGATCGGTGTGGACGGGATGAGAAGGGGGTC GGGAAAGATGGACCTGGCGGTTGCGTCCGAGTCGGCCGCGCTCACGGGGC TGGGGTTTTCACTAAGGAGGGATGTGGGCGCCGGGGAAGCCGTGTTTTTG GATGCTAGAACCGGATCGGTGTCGAATCAGTTTTGTTCCCCACGGCAGCA GCAGCGGAGTAGGGAGGAAGGAGGCGAGAAGAGGGAGGAGGAGGGGGGAG AGGGAAAGGAATCCCGGCGAGCGGGTGCGAGGTTTCAGCCGTGCTTGTTC GAGTACGTTTACATGGCGCGTCCGGACAGTATCATCGATGGTGTTCCGGT GAGAGCG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15443:1183..4089+

>mRNA_Ecto-sp13_S_contig15443.4072.1 ID=mRNA_Ecto-sp13_S_contig15443.4072.1|Name=mRNA_Ecto-sp13_S_contig15443.4072.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=897bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15443:1183..4089+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCATGACGCCATAGCGCACGTGTCGGTGCTGCAGGCTCGAGACGTTTT
TGGCGCGGAGAGCATGGCGGGCTTGCGTGGAGCCTACGGCGTGGGACACG
TGCGCTACCCCACGAGTGGCTGCAACAGCGTCGAGGAGGCACAGCCTTTC
CGGAACAACGTCCCAGTGGGATTTTGCGTTGCGCACAACGGCCACCTGAG
CAATGGCCAGCTGTTGAGAGACCAGCTATCGGCCACTCGGCACCTTAACA
CGGACTCGGACACGGAACTCTTGTCGGAGATATTCGGCATGGAGCTGGCA
GCTAGGAGGCCAGCGATCGGACCGCCAGTAACCCGAGAGCTTCTCTTCCA
AGTTGTTCAGGCGGTAATGGCCCGATGTCGAGGCGGCTACGCGGTAACGG
TGCTGATCAACGGGCACGGCATCTTGGCCTTCCGCGACCCCCACGGAGTT
CGACCCTTGTGTCTCGGGGCGCGCCCGGGAGGGGGCGGGGGGGGTAGCGG
GATCGGCAGCGGCGGTGGCTCCGCCGCAATTGGAGGGGAAGCTATCGGCG
GTGATGGAGGGATCGGTGTGGACGGGATGAGAAGGGGGTCGGGAAAGATG
GACCTGGCGGTTGCGTCCGAGTCGGCCGCGCTCACGGGGCTGGGGTTTTC
ACTAAGGAGGGATGTGGGCGCCGGGGAAGCCGTGTTTTTGGATGCTAGAA
CCGGATCGGTGTCGAATCAGTTTTGTTCCCCACGGCAGCAGCAGCGGAGT
AGGGAGGAAGGAGGCGAGAAGAGGGAGGAGGAGGGGGGAGAGGGAAAGGA
ATCCCGGCGAGCGGGTGCGAGGTTTCAGCCGTGCTTGTTCGAGTACGTTT
ACATGGCGCGTCCGGACAGTATCATCGATGGTGTTCCGGTGAGAGCG
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