mRNA_Ecto-sp13_S_contig15413.4054.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15413.4054.1 vs. uniprot
Match: D8LS16_ECTSI (Hypothetical conserved protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS16_ECTSI) HSP 1 Score: 246 bits (627), Expect = 2.020e-81 Identity = 127/160 (79.38%), Postives = 130/160 (81.25%), Query Frame = 1
Query: 1 MLRTCAAAALVACGLFVSLLSPAXXXXXXXXXXXXXISRDALTPSSSLQAQQQWTMGMEQIKVTKNPSEEEIKALGARSWPTWGCGVSTFPWTYEATPPAPXXXXQGTETCLILEGDVTVTPDDDRDAVEVGVGDLCVFPDGMNCTWDVRAPVKKHYKFE 480
MLRT AAAALVACGL SLLSPA ISRDA TP SSLQAQQ+WTMGMEQIKVTK+PSEEEIKALGARSWPTWGCGVS FPWTYE GTETCLILEGDVTVTPDDDRDAVEVGVGDLCVFPDGM+CTWDVRAPVKKHYKFE
Sbjct: 1 MLRTGAAAALVACGLSASLLSPACGFFLAPSSSFRGISRDAPTPPSSLQAQQRWTMGMEQIKVTKDPSEEEIKALGARSWPTWGCGVSKFPWTYE-----------GTETCLILEGDVTVTPDDDRDAVEVGVGDLCVFPDGMSCTWDVRAPVKKHYKFE 149
BLAST of mRNA_Ecto-sp13_S_contig15413.4054.1 vs. uniprot
Match: A0A7S0WR75_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WR75_9CHLO) HSP 1 Score: 128 bits (322), Expect = 2.360e-35 Identity = 60/105 (57.14%), Postives = 72/105 (68.57%), Query Frame = 1
Query: 163 TMGMEQIKVTKNPSEEEIKALGARSWPTWGCGVSTFPWTYEATPPAPXXXXQGTETCLILEGDVTVTPDDDRDAVEVGVGDLCVFPDGMNCTWDVRAPVKKHYKF 477
T +I VT+ P E+++KALG RSWPTWGCGVS FPWTY Q TET +LEG+VTVTP+ + VE+ GDLCVFP GM+CTWDVR P+ KHY F
Sbjct: 33 TKASAKITVTRTPPEDKLKALGVRSWPTWGCGVSKFPWTY-----------QETETAYLLEGEVTVTPNG-GEPVEIRAGDLCVFPAGMSCTWDVRKPINKHYDF 125
BLAST of mRNA_Ecto-sp13_S_contig15413.4054.1 vs. uniprot
Match: A0A7T1HYH3_9SYNE (Cupin domain-containing protein n=4 Tax=Synechococcus sp. CBW1004 TaxID=1353136 RepID=A0A7T1HYH3_9SYNE) HSP 1 Score: 123 bits (309), Expect = 1.040e-33 Identity = 56/99 (56.57%), Postives = 68/99 (68.69%), Query Frame = 1
Query: 181 IKVTKNPSEEEIKALGARSWPTWGCGVSTFPWTYEATPPAPXXXXQGTETCLILEGDVTVTPDDDRDAVEVGVGDLCVFPDGMNCTWDVRAPVKKHYKF 477
I VT NP E+++LG SWPTWGCGVSTFPWTY+ ETCL+LEGDVTVTP+ + V G GDL VF G++CTWDV AP++KHY+F
Sbjct: 14 ITVTSNPDPAELQSLGVTSWPTWGCGVSTFPWTYDEH-----------ETCLLLEGDVTVTPEGGK-PVRFGAGDLVVFEQGLSCTWDVHAPMRKHYRF 100
BLAST of mRNA_Ecto-sp13_S_contig15413.4054.1 vs. uniprot
Match: A0A8J4LY75_9CHLO (Cupin_3 domain-containing protein n=4 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LY75_9CHLO) HSP 1 Score: 123 bits (309), Expect = 1.780e-33 Identity = 55/99 (55.56%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 181 IKVTKNPSEEEIKALGARSWPTWGCGVSTFPWTYEATPPAPXXXXQGTETCLILEGDVTVTPDDDRDAVEVGVGDLCVFPDGMNCTWDVRAPVKKHYKF 477
+ V + P+E+ IKA G RSWPTWGCGVS FPWTY+ ETC ILEG V VTPD +AVE+ GDL +FP GM+C WDV+AP+ KHY F
Sbjct: 31 VIVHRQPAEDVIKAKGVRSWPTWGCGVSKFPWTYKEN-----------ETCYILEGKVVVTPDAGGEAVEINAGDLAIFPAGMSCIWDVKAPIDKHYNF 118
BLAST of mRNA_Ecto-sp13_S_contig15413.4054.1 vs. uniprot
Match: A0A2K3E5N5_CHLRE (Cupin_3 domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3E5N5_CHLRE) HSP 1 Score: 121 bits (303), Expect = 1.110e-32 Identity = 57/114 (50.00%), Postives = 72/114 (63.16%), Query Frame = 1
Query: 136 SSLQAQQQWTMGMEQIKVTKNPSEEEIKALGARSWPTWGCGVSTFPWTYEATPPAPXXXXQGTETCLILEGDVTVTPDDDRDAVEVGVGDLCVFPDGMNCTWDVRAPVKKHYKF 477
S +Q Q +I V +NP+E+ +KA G RSWPTWGCGVS FPWTY Q ETC +LEGDV VTP+ + V++ GD+ FP GM+CTWDV+AP+ KHY F
Sbjct: 8 SQVQVQASSAKAAMKIVVQRNPAEDVLKAKGVRSWPTWGCGVSKFPWTY-----------QENETCYVLEGDVIVTPNG-GEPVQIKAGDMATFPAGMSCTWDVKAPINKHYNF 109
BLAST of mRNA_Ecto-sp13_S_contig15413.4054.1 vs. uniprot
Match: A0A0A0KVZ0_CUCSA (Cupin_3 domain-containing protein n=3 Tax=Benincaseae TaxID=1003877 RepID=A0A0A0KVZ0_CUCSA) HSP 1 Score: 122 bits (305), Expect = 1.260e-32 Identity = 56/100 (56.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query: 181 IKVTKNPSEEEIKALGARSWPTWGCGVSTFPWTYEATPPAPXXXXQGTETCLILEGDVTVTPDDDRDAVEVGVGDLCVFPDGMNCTWDVRAPVKKHYKFE 480
IKV KNPSE ++ LG R WP WGCG S FPWTY ETC +LEG V VTP ++VE+G GDL VFP GM+CTWDV V KHYKFE
Sbjct: 50 IKVEKNPSESKLTELGVRQWPKWGCGPSKFPWTYSDK-----------ETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKGMSCTWDVSVAVDKHYKFE 138
BLAST of mRNA_Ecto-sp13_S_contig15413.4054.1 vs. uniprot
Match: A0A8J6C5D4_DIALT (Cupin_3 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C5D4_DIALT) HSP 1 Score: 119 bits (299), Expect = 2.630e-32 Identity = 56/104 (53.85%), Postives = 69/104 (66.35%), Query Frame = 1
Query: 166 MGMEQIKVTKNPSEEEIKALGARSWPTWGCGVSTFPWTYEATPPAPXXXXQGTETCLILEGDVTVTPDDDRDAVEVGVGDLCVFPDGMNCTWDVRAPVKKHYKF 477
MG E+I+V + PS EI+ + WPTWGC S F WTY G ETC I+EG+VTVTPDD R+AV VG GD+ VFPDGM+CTW V+ +KKHY+F
Sbjct: 1 MGGEEIQVNRAPSAGEIERM--TQWPTWGCAASEFEWTYS-----------GAETCYIVEGEVTVTPDDGREAVTVGKGDMVVFPDGMSCTWKVKRAIKKHYRF 91
BLAST of mRNA_Ecto-sp13_S_contig15413.4054.1 vs. uniprot
Match: A0A834W9E1_9FABA (Putative fructokinase-5 isoform B n=1 Tax=Senna tora TaxID=362788 RepID=A0A834W9E1_9FABA) HSP 1 Score: 120 bits (302), Expect = 3.380e-32 Identity = 55/100 (55.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query: 181 IKVTKNPSEEEIKALGARSWPTWGCGVSTFPWTYEATPPAPXXXXQGTETCLILEGDVTVTPDDDRDAVEVGVGDLCVFPDGMNCTWDVRAPVKKHYKFE 480
IK+ KNP EE++ LG R WP WGC S FPWTYEA ETC +LEG V VTP ++VE+G GDL VFP GM+CTWDV V KHY FE
Sbjct: 48 IKIEKNPPEEKLTQLGVRKWPKWGCPPSNFPWTYEAK-----------ETCYLLEGKVKVTPSGSDESVEIGAGDLVVFPKGMSCTWDVSVGVDKHYNFE 136
BLAST of mRNA_Ecto-sp13_S_contig15413.4054.1 vs. uniprot
Match: A3Z061_9SYNE (Cupin_3 domain-containing protein n=5 Tax=Cyanobacteria TaxID=1117 RepID=A3Z061_9SYNE) HSP 1 Score: 119 bits (297), Expect = 6.890e-32 Identity = 55/99 (55.56%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 181 IKVTKNPSEEEIKALGARSWPTWGCGVSTFPWTYEATPPAPXXXXQGTETCLILEGDVTVTPDDDRDAVEVGVGDLCVFPDGMNCTWDVRAPVKKHYKF 477
I VT NP ++ +LG +WPTWGC VSTFPWTY+ ETCL+LEGDVTVTPD + V G GDL VF G++CTWDV APV+KHY+F
Sbjct: 14 ITVTSNPDPAQLVSLGVSNWPTWGCEVSTFPWTYDEQ-----------ETCLLLEGDVTVTPDGGK-PVRFGAGDLVVFDAGLSCTWDVHAPVQKHYRF 100
BLAST of mRNA_Ecto-sp13_S_contig15413.4054.1 vs. uniprot
Match: Q60B25_METCA (Cupin_3 domain-containing protein n=5 Tax=Methylococcus TaxID=413 RepID=Q60B25_METCA) HSP 1 Score: 118 bits (296), Expect = 7.280e-32 Identity = 55/102 (53.92%), Postives = 64/102 (62.75%), Query Frame = 1
Query: 172 MEQIKVTKNPSEEEIKALGARSWPTWGCGVSTFPWTYEATPPAPXXXXQGTETCLILEGDVTVTPDDDRDAVEVGVGDLCVFPDGMNCTWDVRAPVKKHYKF 477
M IK+ NP E + LG R WPTW CGVS+FPWTY+ + ETC ILEG+VTVTP + V +G GDL FP GM+CTWDV PVKKHY F
Sbjct: 1 MPSIKIENNPPETRLGELGVRRWPTWSCGVSSFPWTYDES-----------ETCYILEGEVTVTPQG-GEPVRIGKGDLVTFPPGMSCTWDVHVPVKKHYTF 90 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15413.4054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15413.4054.1 >prot_Ecto-sp13_S_contig15413.4054.1 ID=prot_Ecto-sp13_S_contig15413.4054.1|Name=mRNA_Ecto-sp13_S_contig15413.4054.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=161bp MLRTCAAAALVACGLFVSLLSPACGFFLAPLSPFRGISRDALTPSSSLQAback to top mRNA from alignment at Ecto-sp13_S_contig15413:2709..4161- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15413.4054.1 ID=mRNA_Ecto-sp13_S_contig15413.4054.1|Name=mRNA_Ecto-sp13_S_contig15413.4054.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1453bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15413:2709..4161- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15413:2709..4161- >mRNA_Ecto-sp13_S_contig15413.4054.1 ID=mRNA_Ecto-sp13_S_contig15413.4054.1|Name=mRNA_Ecto-sp13_S_contig15413.4054.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=483bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15413:2709..4161- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |