mRNA_Ecto-sp13_S_contig15381.4036.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15381.4036.1 vs. uniprot
Match: D8LRK2_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK2_ECTSI) HSP 1 Score: 587 bits (1514), Expect = 2.800e-205 Identity = 286/312 (91.67%), Postives = 292/312 (93.59%), Query Frame = 1
Query: 40 MLKKCCFALVALLPTTAVSASQLTTTDACNFTFSDGELPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDENGTLHSCNGESSAYHVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGERVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWSDWWAAVDSRYGSTEESDDPCTDYDGILDADGVTCCSDEDTTCDSGDVDSDDRFCGDDNPPPCEL 975
MLKKCCFALVALL TTAVSASQ TTTDACNFTFSDG+LPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDENGTLHSCNGESSAY VGDDTWNTTY+GNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGE+VQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWS+WWA VDSRYGSTEESDDPCT+YDGI+DADGV CCSDED TCDSG P PCEL
Sbjct: 1 MLKKCCFALVALLSTTAVSASQFTTTDACNFTFSDGQLPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDENGTLHSCNGESSAYQVGDDTWNTTYVGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEKVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWSNWWADVDSRYGSTEESDDPCTEYDGIVDADGVYCCSDEDNTCDSGXXXXXXXXXXXXXPAPCEL 312
BLAST of mRNA_Ecto-sp13_S_contig15381.4036.1 vs. uniprot
Match: D7G672_ECTSI (WSC domain-containing protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G672_ECTSI) HSP 1 Score: 580 bits (1495), Expect = 5.440e-202 Identity = 278/289 (96.19%), Postives = 286/289 (98.96%), Query Frame = 1
Query: 40 MLKKCCFALVALLPTTAVSASQLTTTDACNFTFSDGELPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDENGTLHSCNGESSAYHVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGERVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWSDWWAAVDSRYGSTEESDDPCTDYDGILDADGVTCCSDEDTT 906
MLKKCCFALVALLPTTAVSASQ TTTDACNFTFSDG+LPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDENGTLHSCNGESSAYHVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGE+VQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWS+WWA VDSRYGSTEESDDPCT++DGI+DADGV CCSDE++T
Sbjct: 1 MLKKCCFALVALLPTTAVSASQFTTTDACNFTFSDGQLPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDENGTLHSCNGESSAYHVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEKVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWSNWWAVVDSRYGSTEESDDPCTEHDGIVDADGVYCCSDEEST 289
BLAST of mRNA_Ecto-sp13_S_contig15381.4036.1 vs. uniprot
Match: D7FS82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS82_ECTSI) HSP 1 Score: 553 bits (1425), Expect = 3.950e-198 Identity = 268/277 (96.75%), Postives = 270/277 (97.47%), Query Frame = 1
Query: 1 RHEATTSLYNSTAMLKKCCFALVALLPTTAVSASQLTTTDACNFTFSDGELPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDENGTLHSCNGESSAYHVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGERVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWSDWWAAVDSRYGSTEES 831
RHEATTSLY TAMLK CCFALVALLPTTAVSASQ TTTD CNFTFSDG+LPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDENGTLHSCNGESSAYHVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGE+VQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWSDWWA VDSRY STEES
Sbjct: 2 RHEATTSLYKGTAMLKICCFALVALLPTTAVSASQFTTTDGCNFTFSDGQLPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDENGTLHSCNGESSAYHVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEQVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWSDWWATVDSRYVSTEES 278
BLAST of mRNA_Ecto-sp13_S_contig15381.4036.1 vs. uniprot
Match: D7G7E4_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E4_ECTSI) HSP 1 Score: 446 bits (1147), Expect = 1.390e-150 Identity = 216/240 (90.00%), Postives = 221/240 (92.08%), Query Frame = 1
Query: 256 NGTLHSCNGESSAYHVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGERVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWSDWWAAVDSRYGSTEESDDPCTDYDGILDADGVTCCSDEDTTCDSGDVDSDDRFCGDDNPPPCEL 975
NGTLHSCNGESSAYHVGDDTWNTTYIGNDGD+L VDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGE+VQSVVVHAASPIGPTSSASLGVGNALILAGKADQG PWSEGFNEDGSRKDDEFWSDWWA VDSRYGSTEESDDPCT+YDGI+DADGV CC DED+TCDSGD PCEL
Sbjct: 13 NGTLHSCNGESSAYHVGDDTWNTTYIGNDGDKLGVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEQVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGPPWSEGFNEDGSRKDDEFWSDWWAVVDSRYGSTEESDDPCTEYDGIVDADGVYCCFDEDSTCDSGDXXXXXXXXXXXXXAPCEL 252
BLAST of mRNA_Ecto-sp13_S_contig15381.4036.1 vs. uniprot
Match: A0A814YKZ3_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814YKZ3_9BILA) HSP 1 Score: 84.0 bits (206), Expect = 3.980e-15 Identity = 63/157 (40.13%), Postives = 85/157 (54.14%), Query Frame = 1
Query: 88 AVSASQLTTTDACNFTFSDGELPNFRLPEAGPNSPGDVQLNLGNNI-ITRGWVEEDENGTLHSCNGESS----AY-HVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFT 540
A++ S T C ++F+ + P+F LP A PNSPGD QLNL NNI ++ G G CNG S AY + + W T+Y +G +++VFYAT Q+ L V LQ + +L L TIRLNITC ++ Q GC+ FTVN T
Sbjct: 23 AITVSLANTCANCLYSFTAPQFPSFTLPAAQPNSPGDQQLNLNNNIRLSNGSALNAGQG----CNGGRSSGEYAYLNESNGQWMTSYPDVNGRPADLNVFYATAQSALNVATLQTNY-ANLALFLTCKTIRLNITC------NNGQKGCIYFTVNCT 168 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15381.4036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15381.4036.1 >prot_Ecto-sp13_S_contig15381.4036.1 ID=prot_Ecto-sp13_S_contig15381.4036.1|Name=mRNA_Ecto-sp13_S_contig15381.4036.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=325bp RHEATTSLYNSTAMLKKCCFALVALLPTTAVSASQLTTTDACNFTFSDGEback to top mRNA from alignment at Ecto-sp13_S_contig15381:75..2846- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15381.4036.1 ID=mRNA_Ecto-sp13_S_contig15381.4036.1|Name=mRNA_Ecto-sp13_S_contig15381.4036.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2772bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15381:75..2846- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15381:75..2846- >mRNA_Ecto-sp13_S_contig15381.4036.1 ID=mRNA_Ecto-sp13_S_contig15381.4036.1|Name=mRNA_Ecto-sp13_S_contig15381.4036.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=975bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15381:75..2846- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |