mRNA_Ecto-sp13_S_contig15316.3998.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15316.3998.1 vs. uniprot
Match: A0A6H5KNK6_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK6_9PHAE) HSP 1 Score: 496 bits (1277), Expect = 2.750e-169 Identity = 238/240 (99.17%), Postives = 239/240 (99.58%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLFLTWLLFFVFILPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDSVNLPGSRFVSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP 720
GRIMLGVHYRQLMTTTMLLFLTWLLFFVFILPSYGRWSFA+VAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDSVNLPGSR VSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP
Sbjct: 542 GRIMLGVHYRQLMTTTMLLFLTWLLFFVFILPSYGRWSFAMVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDSVNLPGSRLVSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP 781
BLAST of mRNA_Ecto-sp13_S_contig15316.3998.1 vs. uniprot
Match: D7FZN5_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN5_ECTSI) HSP 1 Score: 441 bits (1134), Expect = 7.260e-153 Identity = 207/210 (98.57%), Postives = 210/210 (100.00%), Query Frame = 1
Query: 91 LPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDSVNLPGSRFVSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP 720
LPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYR+FMAFIIL+TISSSLVCAMSVVHTVTRTGHVGPMYLTDSVNLPGSRFVSPVLG+WTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP
Sbjct: 226 LPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRSFMAFIILITISSSLVCAMSVVHTVTRTGHVGPMYLTDSVNLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP 435
BLAST of mRNA_Ecto-sp13_S_contig15316.3998.1 vs. uniprot
Match: D8LTN2_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTN2_ECTSI) HSP 1 Score: 250 bits (638), Expect = 1.170e-79 Identity = 131/247 (53.04%), Postives = 169/247 (68.42%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLFLTWLLFFVFI-LPS--YGRWSF-ALVAACLCTGCFVSLVFSSFLDPGIIPRRAAS--GLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVT-RTGHVGPMYLTDSVNLPGSRFVSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP 720
GRI++G H R L + +L T LFF FI LP+ YG W+F + V+ CL GC +SL ++ +DPGIIPRR + D DV ++ S C+TC + RPPR KHCK CNNCV+ FDHHCP+TGNC+GARNYRAFMAFI +VTIS CA+SV+H V R +VGP+ L + +PGS+F +L +WTA++ VLVG LL FH++L+AKGQTTNEYLR E G+ R F +C ELWCG +P
Sbjct: 26 GRIVVGSHCRALAFSATILLFTATLFFTFISLPATTYGGWAFFSTVSVCLFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAERKS-CVTCQLARPPRAKHCKRCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPVLLVNWARIPGSQFFPHLLALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRPFLSSCHELWCGARP 271
BLAST of mRNA_Ecto-sp13_S_contig15316.3998.1 vs. uniprot
Match: A0A835YZ83_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ83_9STRA) HSP 1 Score: 235 bits (599), Expect = 2.950e-73 Identity = 116/242 (47.93%), Postives = 153/242 (63.22%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLFLTWLLFFVFILPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDSVNLPGSRFVSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKR--RGNVPHRSFGPNCRELWCGTQP 720
G++MLGVH QL T L+ TWLLF VF+ P+Y W V A + C V+L ++ +PGIIP + S + + R +L+YCITCHIVRPPR KHC+HCN CV FDHHCPW GNC+G RNYR+F+ F+I++ +S +H +TR G+VGP LT +PGS +VSP LG+W ++T +VG LL H+YLL +GQTTNE+L+GE RG V + C LWC P
Sbjct: 61 GKLMLGVHCDQLWVTGSLILGTWLLFLVFVAPNYTGWWCVGVGAAMLVLCLVTLAETAVTEPGIIPPQPRSDAAEGMSASTRGKLNYCITCHIVRPPRAKHCRHCNVCVRRFDHHCPWIGNCIGHRNYRSFLRFLIVLAXXXXXXXXLSAIHALTRLGNVGPEDLTSQSGVPGSEYVSPFLGVWALLVTAIVGGLLLLHMYLLFQGQTTNEFLKGEPVHVRGRVMRK-----CLLLWCERLP 297
BLAST of mRNA_Ecto-sp13_S_contig15316.3998.1 vs. uniprot
Match: A0A7S3UWP6_HETAK (Palmitoyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWP6_HETAK) HSP 1 Score: 223 bits (567), Expect = 4.770e-68 Identity = 101/206 (49.03%), Postives = 136/206 (66.02%), Query Frame = 1
Query: 115 FALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLT----DSVNLPGSRFVSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP 720
+ L A L L+ ++ DPGIIPR S L +S+P +++++++YC TCHIVRPPRTKHC+HCNNC+ TFDHHCPWTGNC+G RNYR F F++ +T SS+ V MS + + Y D + G +F++P+L +WT ++T LVGALL FH+ LL +GQTTNEYLRGEK RG++PH + NC LWC P
Sbjct: 2 YLLAGAALMAASVAFLLVTALRDPGIIPRHPPSQLVESMPPEMKEKMNYCPTCHIVRPPRTKHCRHCNNCIQTFDHHCPWTGNCIGRRNYRFFYLFLMSITASSAYVLVMSANYLTRHLTDIDSKYFDAIFKDEWKIKGGQFIAPLLILWTLLVTTLVGALLVFHIILLGRGQTTNEYLRGEKNRGDIPHGNIFTNCGNLWCHDMP 207
BLAST of mRNA_Ecto-sp13_S_contig15316.3998.1 vs. uniprot
Match: A0A812WJG5_SYMMI (Palmitoyltransferase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WJG5_SYMMI) HSP 1 Score: 176 bits (445), Expect = 1.030e-49 Identity = 94/220 (42.73%), Postives = 132/220 (60.00%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLFLTWLLFFVFILPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMS---VVHTVTRTGHVGP--MYLTDSVNLPGSRFVSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRG 645
GRIM+G H L+ + LL +T+ LF + ++P + L G L+ ++ +PGIIPRR S L +S+ ED R +L YC TC IVRPPR KHC++C+NCV FDHHCPWTG C+G RNY F FI L T+S++ C+ S +V H MY+ D V+P++ +T ++ VLVG+LL FH++L+ + QTTNE+LRG
Sbjct: 99 GRIMMGAHSNHLLLSITLLVVTYSLFLLGVVPLLHMPILFYIGVGLAVGTLTFLLLTALTEPGIIPRRPPSKLLESMSEDARQKLQYCHTCRIVRPPRAKHCRYCDNCVEVFDHHCPWTGTCIGVRNYAYFCVFITLATVSAAFACSTSAYLIVQWAEGRNHEPRLLMYIRD--------VVAPLVCAFTLLVFVLVGSLLAFHLFLIGRQQTTNEFLRG 310
BLAST of mRNA_Ecto-sp13_S_contig15316.3998.1 vs. uniprot
Match: A0A7R9UDC7_9STRA (Palmitoyltransferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDC7_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.750e-49 Identity = 94/223 (42.15%), Postives = 138/223 (61.88%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLFLTWLLFFVFILPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDSVNLPGS----RFVSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRR 657
GRIMLG QL T +L+ +TW +F I+P +++ L T V+L+ ++ DPGI+PRR S + +S+P +++++ YC TCHI++P RTKHC+ C+NCV FDHHCPW GNC+GARNYR F+ FII ++ V ++S+ ++ TG + D PG+ R ++ VL WT ++T LVGAL FH L+ GQTTNEY++ + R
Sbjct: 130 GRIMLGAMAHQLGITLVLMLITWGIFLCLIVPLLRNAVLVVLSFMLFTTQLVALLCTALTDPGILPRRPPSAVVESMPMQMKERMHYCPTCHIIKPHRTKHCRICDNCVQEFDHHCPWVGNCIGARNYRFFLLFIISTVLACVFVLSVSLYAFLSGTGGLIVQVQDD----PGADTVLRVLALVLVFWTFLLTALVGALTFFHCSLMCMGQTTNEYVKAARAR 348
BLAST of mRNA_Ecto-sp13_S_contig15316.3998.1 vs. uniprot
Match: F0Y087_AURAN (Palmitoyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y087_AURAN) HSP 1 Score: 157 bits (396), Expect = 7.160e-43 Identity = 86/219 (39.27%), Postives = 126/219 (57.53%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLFLTWLLFFVFILPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVT-RTGHVGPMYLTDSVNLPGSRFVSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKR 654
GR+MLGV +L+ T +L+ TW F P+ + A + CFV L ++ DPGI+PR S +P + + ++++C TC I+RPPR KHC++C+NCV FDHHCPW G CVGARNYRAF+ F++ + VC+ + + V T H Y+ G V+ + W+A++ + V L+ FH+YL+ QTTNEYLR E+R
Sbjct: 42 GRLMLGVDCDRLLATALLIATTWAGHFFVTWPNLD-FDERCGAGGIAVLCFVCLAAAATRDPGIVPRLPRSDRLSGLPCETQYRMNWCQTCQILRPPRAKHCRYCDNCVRVFDHHCPWLGTCVGARNYRAFVLFLVWTLAGALYVCSRAARYLVRCSTVHACSAYVDF-----GRPIVAGISVAWSAVVALPVATLIAFHLYLMGHDQTTNEYLRDERR 254
BLAST of mRNA_Ecto-sp13_S_contig15316.3998.1 vs. uniprot
Match: A0A3P3YIW4_PLABS (Palmitoyltransferase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YIW4_PLABS) HSP 1 Score: 133 bits (335), Expect = 2.140e-34 Identity = 86/232 (37.07%), Postives = 123/232 (53.02%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLFLTWLLFFVFILPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLS-----YCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDSVNLPGSRFVSPVLGMWTAMITVLVGALL---CFHVYLLAKGQTTNEYLRGEKRRGNVPH 672
GR+++G + T +LL +LF +++ S G W+ L +CL + LV ++F DPG+IP+ ++G + PED + + YC TC+I RPPR KHC+ C+NCV+ FDHHC W G CVG RNYR F+ F+ T L A+ VV +T G D V SR +P + + V LL C+H ++ KGQTTNE+LR R P+
Sbjct: 13 GRVVVGSQPAAAVGTLVLLVAAHVLFALYVAQSVGLWA-VLTCSCLAFVSTIFLVTTAFSDPGVIPKGPSNGSAEP-PEDFQVTAAGPSHKYCETCNIWRPPRAKHCRLCDNCVIRFDHHCGWIGTCVGQRNYRTFLGFLFTTTALLVLDIAVVVVAFLTAVRQSGTGSGVDVVIGTFSR--APAIVSFFIFSCCFVFGLLSMSCYHFWITVKGQTTNEHLREVYRNATNPY 240
BLAST of mRNA_Ecto-sp13_S_contig15316.3998.1 vs. uniprot
Match: A0A6A5C2S5_NAEFO (Palmitoyltransferase n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C2S5_NAEFO) HSP 1 Score: 136 bits (342), Expect = 3.850e-34 Identity = 91/250 (36.40%), Postives = 129/250 (51.60%), Query Frame = 1
Query: 1 GRIMLGVHYRQLMTTTMLLFLTWLLFFVFILPSYGRWSFALVAACLCTG-------CFVSLVFSSFLDPGIIPRR-------AASG---LPDSIPEDVRDQ-----------LSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTV---TRTGHVGPMYLTDSV-NLPGSRFVSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKR 654
GRI++G + + T +L+F+ +++ I+P Y + L + L ++SF DPGIIPRR A +G + D PE + Q L YC +C I RPPRT HC+ CNNCV FDHHCPWTG C+G RNYR+F+ FI TI+S LV + + HTV T ++ + D V N VL ++ + + VG+L FH YL++ GQTT EY+ K+
Sbjct: 131 GRIIIGPDRKLFILTLILMFIPAIIYAPVIMPHYLLFVHPAAGVILLIVPLIGFLLMLIGLFYTSFTDPGIIPRRKYIDQQFARTGEEKIDDRKPEPPQFQKVHLENGQIVELKYCPSCEIYRPPRTSHCRRCNNCVERFDHHCPWTGTCIGRRNYRSFILFIFSTTITSWLVIFICIAHTVLVWTYYFNINTDTIPDKVANSVRYSIGGLVLIVYIFLTQLFVGSLSVFHAYLISTGQTTYEYVNKAKK 380 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15316.3998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15316.3998.1 >prot_Ecto-sp13_S_contig15316.3998.1 ID=prot_Ecto-sp13_S_contig15316.3998.1|Name=mRNA_Ecto-sp13_S_contig15316.3998.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=237bp MLGVHYRQLMTTTMLLFLTWLLFFVFILPSYGRWSFALVAACLCTGCFVSback to top mRNA from alignment at Ecto-sp13_S_contig15316:8..4052- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15316.3998.1 ID=mRNA_Ecto-sp13_S_contig15316.3998.1|Name=mRNA_Ecto-sp13_S_contig15316.3998.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4045bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15316:8..4052- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15316:8..4052- >mRNA_Ecto-sp13_S_contig15316.3998.1 ID=mRNA_Ecto-sp13_S_contig15316.3998.1|Name=mRNA_Ecto-sp13_S_contig15316.3998.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=711bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15316:8..4052- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |