mRNA_Ecto-sp13_S_contig15296.3979.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A6H5K059_9PHAE (G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K059_9PHAE) HSP 1 Score: 258 bits (658), Expect = 1.060e-80 Identity = 146/197 (74.11%), Postives = 149/197 (75.63%), Query Frame = 1
Query: 1 VDMVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKANRGGXXXXXXEGAKQV------------------------ARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 519
VDMVFEVRDARIPFTSAN+DLDKIVGPSKARLIVLNKARARQC ++ F GKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKAN G EGAKQV ARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP
Sbjct: 92 VDMVFEVRDARIPFTSANQDLDKIVGPSKARLIVLNKARARQCLV---------AVRDFPALGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKANWSGSGGGDGEGAKQVCNRPALAAPFSPLRLCRAVPSREVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 279
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A835Z590_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z590_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.860e-31 Identity = 95/239 (39.75%), Postives = 123/239 (51.46%), Query Frame = 1
Query: 1 VDMVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQ------------------------GKAAVYACG------------RTGT---------------NVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKANRGGXXXXXXEGA-KQVARVGAMPGVTRQ-------------VSAFRIASNP-PLYLVDTPGVMVP 519
VD+V EVRDARIPF+SAN +LD+++G SKARL+VLNK DL+ ++ V +R + + GK +Y G RTG + LL WARE+GA RG+F T GA+AMVVGMPNVGKS+LIN +R GG +GA ++V RVGA PGV + +FR++ P PLY+VDTPGVMVP
Sbjct: 52 VDVVLEVRDARIPFSSANHELDRLIG-SKARLVVLNKE------DLAEPSMRSAVTERLRAERKDTGETTAVMDTASEVSRVRRALGKGVLYTNGSESDPPTCLWHPRTGXXXXXXXXGDGPGGGKGIPGLLRWAREKGALRGQFVTLGAMAMVVGMPNVGKSTLINHMRRLCRGGG------KGAGRKVVRVGATPGVXXXXXXXXXXXXXXXXIDSFRVSELPQPLYMVDTPGVMVP 277
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A1V9YN62_9STRA (Mitochondrial GTPase 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN62_9STRA) HSP 1 Score: 123 bits (309), Expect = 2.990e-31 Identity = 74/174 (42.53%), Postives = 106/174 (60.92%), Query Frame = 1
Query: 1 VDMVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEFS-TTGAIAMVVGMPNVGKSSLINLLRGKANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 519
+D++ EVRDARIPF+SAN LD I G K RL+VLNK+ DL+N ++ RV RF++ G +++ G ++ K+L W G + +F T G + MVVG+PNVGKSSLIN R ++ K+ A VGA PGVT + F++ +P +Y++DTPGVM+P
Sbjct: 38 IDVIIEVRDARIPFSSANPLLDGI-GNHKPRLVVLNKS------DLANSNMKARVEARFEDAGMDSLFTSVAKGKHIQKILQWCTTHG--KSQFQQTAGTVVMVVGVPNVGKSSLINSFRSISSS-----LKLAKGKKKATVGATPGVTVRTDIFKVNESPAIYVMDTPGVMLP 197
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A1V9Y456_9STRA (Mitochondrial GTPase 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y456_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.220e-30 Identity = 72/173 (41.62%), Postives = 104/173 (60.12%), Query Frame = 1
Query: 1 VDMVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 519
+D++ EVRDARIPFTSAN LD I G K RL+VLNK+ DL+N ++ RV RF + +++ G ++ K+L W G + + ST G + M+VG+PNVGKSS+IN R ++ K+ A VGA PGVT + F++ +P +Y++DTPGVM+P
Sbjct: 36 IDVIIEVRDARIPFTSANPLLDGI-GNHKPRLVVLNKS------DLANSNMKARVEARFDHENIDSMFTSVIKGKHIQKILQWCTAAGKSQFQ-STAGTVVMIVGIPNVGKSSMINAFRSLSSS-----LKVSKGKKKAVVGATPGVTVRTDMFKVNESPAIYVMDTPGVMLP 195
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A418AEZ7_9STRA (CP-type G domain-containing protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AEZ7_9STRA) HSP 1 Score: 119 bits (299), Expect = 5.520e-30 Identity = 74/178 (41.57%), Postives = 104/178 (58.43%), Query Frame = 1
Query: 1 VDMVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRG-----KANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 519
VD++ EVRDARIP++SAN LD I G K RL+VLNK+ DL+N +++RV RF EQ ++ G ++ +L W E G + + ST G + MVVG+PNVGKSS+IN R K ++G K+ A VG PGVT + ++ P +Y++DTPGVM+P
Sbjct: 61 VDVIIEVRDARIPWSSANPVLDGI-GSHKPRLVVLNKS------DLANSNMKERVEYRFDEQNMDCMFTSVIKGKHIRNILQWCTEHGKSQFQ-STAGTVVMVVGVPNVGKSSMINAFRSISTSLKLSKG----------KKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLP 220
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A6G0WZQ3_9STRA (Mitochondrial GTPase 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZQ3_9STRA) HSP 1 Score: 119 bits (299), Expect = 9.010e-30 Identity = 75/179 (41.90%), Postives = 104/179 (58.10%), Query Frame = 1
Query: 1 VDMVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEF-STTGAIAMVVGMPNVGKSSLINLLRG-----KANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 519
VD++ EVRDARIP++SAN LD I G K RL+VLNK DL+N +++RV RF EQ ++ G ++ +L W E G + +F ST G + MVVG+PNVGKSS+IN R K ++G K+ A VG PGVT + ++ P +Y++DTPGVM+P
Sbjct: 38 VDVIIEVRDARIPYSSANPLLDGI-GNHKPRLVVLNKT------DLANSNMKERVAYRFHEQNMDCMFTSVIKGKHIRNILDWCTEHG--KSQFKSTAGTVVMVVGIPNVGKSSMINAFRSISTSLKLSKG----------KKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLP 197
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: T0RG29_SAPDV (Mitochondrial GTPase 1 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RG29_SAPDV) HSP 1 Score: 119 bits (297), Expect = 1.740e-29 Identity = 71/173 (41.04%), Postives = 102/173 (58.96%), Query Frame = 1
Query: 1 VDMVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 519
+D++ EVRDARIPF+SAN LD I G K RL+VLNK+ DL+N ++ RV RF+E ++ G ++ +L W G + + ST G + M+VG+PNVGKSS+IN R ++ K+ A VGA PGVT + F++ P +Y++DTPGVM+P
Sbjct: 37 IDVIIEVRDARIPFSSANPLLDGI-GNHKPRLVVLNKS------DLANSNMKARVEARFEEADMDCLFTSVIKGKHIQHILKWCNTHGKSQFQ-STAGTVVMIVGVPNVGKSSMINAFRSISSS-----LKLSKGKKKATVGATPGVTVRTDIFKVNEAPAIYVMDTPGVMLP 196
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A024UI85_9STRA (Mitochondrial GTPase 1 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UI85_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.780e-29 Identity = 74/178 (41.57%), Postives = 104/178 (58.43%), Query Frame = 1
Query: 1 VDMVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRG-----KANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 519
VD++ EVRDARIP++SAN LD I G K RL+VLNK+ DL+N +++RV RF EQ ++ G ++ +L W E G + + ST G + MVVG+PNVGKSS+IN R K ++G K+ A VG PGVT + ++ P +Y++DTPGVM+P
Sbjct: 38 VDVIIEVRDARIPWSSANPVLDGI-GSHKPRLVVLNKS------DLANSNMKERVEYRFDEQNMDCMFTSVIKGKHMRNILQWCTEHGKSQFQ-STAGTVVMVVGVPNVGKSSMINAFRSISTSLKLSKG----------KKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLP 197
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A485KRB5_9STRA (Mitochondrial GTPase 1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRB5_9STRA) HSP 1 Score: 118 bits (295), Expect = 4.120e-29 Identity = 73/178 (41.01%), Postives = 103/178 (57.87%), Query Frame = 1
Query: 1 VDMVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRG-----KANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 519
VD++ EVRDARIP++SAN LD I G K RL+VLNK+ DL+N + +RV RF EQ ++ G ++ +L W E G + + ST G + M+ G+PNVGKSS+IN RG K ++G K+ A VG PGVT + ++ P +Y++DTPGVM+P
Sbjct: 45 VDVIIEVRDARIPWSSANPLLDGI-GNHKPRLVVLNKS------DLANSNMRERVEYRFHEQDMDCMFTSVIKGKHIRNILQWCTEHGKSQFQ-STAGTVVMICGIPNVGKSSMINAFRGISTSLKLSKG----------KKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLP 204
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A7S1T9E7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T9E7_9CHLO) HSP 1 Score: 111 bits (277), Expect = 2.160e-27 Identity = 64/177 (36.16%), Postives = 107/177 (60.45%), Query Frame = 1
Query: 1 VDMVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLL----AWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 519
VD+V EVRDAR+PF++AN + + ++ +K R++V+NK+ DL++ +Q++++ F+ + + ++C + +V KLL +W ++ + + + MVVG+PN GKSSLIN R A + + A+ G PGVTRQ+S F++ S P LY++DTPGVM+P
Sbjct: 26 VDLVMEVRDARVPFSAANPEFETLLA-NKRRMLVMNKS------DLASGQEQQKIIRHFEGRQQRVCFSCAQDLKSVRKLLEGCRSWLKQ------DSTAVTHLMMVVGLPNTGKSSLINRFRQVAPKS--KSPMRQRGMGTAKTGPTPGVTRQLSGFKVGSTPSLYILDTPGVMLP 187 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15296.3979.1 >prot_Ecto-sp13_S_contig15296.3979.1 ID=prot_Ecto-sp13_S_contig15296.3979.1|Name=mRNA_Ecto-sp13_S_contig15296.3979.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=171bp MVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEback to top mRNA from alignment at Ecto-sp13_S_contig15296:3..2528- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15296.3979.1 ID=mRNA_Ecto-sp13_S_contig15296.3979.1|Name=mRNA_Ecto-sp13_S_contig15296.3979.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2526bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15296:3..2528- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15296:3..2528- >mRNA_Ecto-sp13_S_contig15296.3979.1 ID=mRNA_Ecto-sp13_S_contig15296.3979.1|Name=mRNA_Ecto-sp13_S_contig15296.3979.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=513bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15296:3..2528- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |