prot_Ecto-sp13_S_contig15296.3979.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15296.3979.1
Unique Nameprot_Ecto-sp13_S_contig15296.3979.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length171
Homology
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A6H5K059_9PHAE (G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K059_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 2.170e-79
Identity = 144/195 (73.85%), Postives = 147/195 (75.38%), Query Frame = 0
Query:    1 MVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKANRGGXXXXXXEGAKQV------------------------ARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 171
            MVFEVRDARIPFTSAN+DLDKIVGPSKARLIVLNKARARQC            ++ F   GKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKAN  G      EGAKQV                        ARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP
Sbjct:   94 MVFEVRDARIPFTSANQDLDKIVGPSKARLIVLNKARARQCLV---------AVRDFPALGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKANWSGSGGGDGEGAKQVCNRPALAAPFSPLRLCRAVPSREVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 279          
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A1V9YN62_9STRA (Mitochondrial GTPase 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN62_9STRA)

HSP 1 Score: 120 bits (301), Expect = 4.270e-30
Identity = 73/172 (42.44%), Postives = 104/172 (60.47%), Query Frame = 0
Query:    1 MVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEFS-TTGAIAMVVGMPNVGKSSLINLLRGKANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 171
            ++ EVRDARIPF+SAN  LD I G  K RL+VLNK+      DL+N  ++ RV  RF++ G  +++     G ++ K+L W    G  + +F  T G + MVVG+PNVGKSSLIN  R  ++            K+ A VGA PGVT +   F++  +P +Y++DTPGVM+P
Sbjct:   40 VIIEVRDARIPFSSANPLLDGI-GNHKPRLVVLNKS------DLANSNMKARVEARFEDAGMDSLFTSVAKGKHIQKILQWCTTHG--KSQFQQTAGTVVMVVGVPNVGKSSLINSFRSISSS-----LKLAKGKKKATVGATPGVTVRTDIFKVNESPAIYVMDTPGVMLP 197          
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A835Z590_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z590_9STRA)

HSP 1 Score: 123 bits (308), Expect = 5.170e-30
Identity = 93/237 (39.24%), Postives = 121/237 (51.05%), Query Frame = 0
Query:    1 MVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQ------------------------GKAAVYACG------------RTGT---------------NVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKANRGGXXXXXXEGA-KQVARVGAMPGVTRQ-------------VSAFRIASNP-PLYLVDTPGVMVP 171
            +V EVRDARIPF+SAN +LD+++G SKARL+VLNK       DL+  ++   V +R + +                        GK  +Y  G            RTG                 +  LL WARE+GA RG+F T GA+AMVVGMPNVGKS+LIN +R     GG      +GA ++V RVGA PGV                + +FR++  P PLY+VDTPGVMVP
Sbjct:   54 VVLEVRDARIPFSSANHELDRLIG-SKARLVVLNKE------DLAEPSMRSAVTERLRAERKDTGETTAVMDTASEVSRVRRALGKGVLYTNGSESDPPTCLWHPRTGXXXXXXXXGDGPGGGKGIPGLLRWAREKGALRGQFVTLGAMAMVVGMPNVGKSTLINHMRRLCRGGG------KGAGRKVVRVGATPGVXXXXXXXXXXXXXXXXIDSFRVSELPQPLYMVDTPGVMVP 277          
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A1V9Y456_9STRA (Mitochondrial GTPase 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y456_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.150e-29
Identity = 71/171 (41.52%), Postives = 102/171 (59.65%), Query Frame = 0
Query:    1 MVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 171
            ++ EVRDARIPFTSAN  LD I G  K RL+VLNK+      DL+N  ++ RV  RF  +   +++     G ++ K+L W    G  + + ST G + M+VG+PNVGKSS+IN  R  ++            K+ A VGA PGVT +   F++  +P +Y++DTPGVM+P
Sbjct:   38 VIIEVRDARIPFTSANPLLDGI-GNHKPRLVVLNKS------DLANSNMKARVEARFDHENIDSMFTSVIKGKHIQKILQWCTAAGKSQFQ-STAGTVVMIVGIPNVGKSSMINAFRSLSSS-----LKVSKGKKKAVVGATPGVTVRTDMFKVNESPAIYVMDTPGVMLP 195          
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A418AEZ7_9STRA (CP-type G domain-containing protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AEZ7_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.110e-28
Identity = 72/176 (40.91%), Postives = 102/176 (57.95%), Query Frame = 0
Query:    1 MVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRG-----KANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 171
            ++ EVRDARIP++SAN  LD I G  K RL+VLNK+      DL+N  +++RV  RF EQ    ++     G ++  +L W  E G  + + ST G + MVVG+PNVGKSS+IN  R      K ++G          K+ A VG  PGVT +    ++   P +Y++DTPGVM+P
Sbjct:   63 VIIEVRDARIPWSSANPVLDGI-GSHKPRLVVLNKS------DLANSNMKERVEYRFDEQNMDCMFTSVIKGKHIRNILQWCTEHGKSQFQ-STAGTVVMVVGVPNVGKSSMINAFRSISTSLKLSKG----------KKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLP 220          
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A6G0WZQ3_9STRA (Mitochondrial GTPase 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZQ3_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.790e-28
Identity = 73/177 (41.24%), Postives = 102/177 (57.63%), Query Frame = 0
Query:    1 MVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEF-STTGAIAMVVGMPNVGKSSLINLLRG-----KANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 171
            ++ EVRDARIP++SAN  LD I G  K RL+VLNK       DL+N  +++RV  RF EQ    ++     G ++  +L W  E G  + +F ST G + MVVG+PNVGKSS+IN  R      K ++G          K+ A VG  PGVT +    ++   P +Y++DTPGVM+P
Sbjct:   40 VIIEVRDARIPYSSANPLLDGI-GNHKPRLVVLNKT------DLANSNMKERVAYRFHEQNMDCMFTSVIKGKHIRNILDWCTEHG--KSQFKSTAGTVVMVVGIPNVGKSSMINAFRSISTSLKLSKG----------KKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLP 197          
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: T0RG29_SAPDV (Mitochondrial GTPase 1 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RG29_SAPDV)

HSP 1 Score: 115 bits (289), Expect = 2.470e-28
Identity = 70/171 (40.94%), Postives = 100/171 (58.48%), Query Frame = 0
Query:    1 MVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 171
            ++ EVRDARIPF+SAN  LD I G  K RL+VLNK+      DL+N  ++ RV  RF+E     ++     G ++  +L W    G  + + ST G + M+VG+PNVGKSS+IN  R  ++            K+ A VGA PGVT +   F++   P +Y++DTPGVM+P
Sbjct:   39 VIIEVRDARIPFSSANPLLDGI-GNHKPRLVVLNKS------DLANSNMKARVEARFEEADMDCLFTSVIKGKHIQHILKWCNTHGKSQFQ-STAGTVVMIVGVPNVGKSSMINAFRSISSS-----LKLSKGKKKATVGATPGVTVRTDIFKVNEAPAIYVMDTPGVMLP 196          
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A024UI85_9STRA (Mitochondrial GTPase 1 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UI85_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.530e-28
Identity = 72/176 (40.91%), Postives = 102/176 (57.95%), Query Frame = 0
Query:    1 MVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRG-----KANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 171
            ++ EVRDARIP++SAN  LD I G  K RL+VLNK+      DL+N  +++RV  RF EQ    ++     G ++  +L W  E G  + + ST G + MVVG+PNVGKSS+IN  R      K ++G          K+ A VG  PGVT +    ++   P +Y++DTPGVM+P
Sbjct:   40 VIIEVRDARIPWSSANPVLDGI-GSHKPRLVVLNKS------DLANSNMKERVEYRFDEQNMDCMFTSVIKGKHMRNILQWCTEHGKSQFQ-STAGTVVMVVGVPNVGKSSMINAFRSISTSLKLSKG----------KKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLP 197          
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A485KRB5_9STRA (Mitochondrial GTPase 1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRB5_9STRA)

HSP 1 Score: 114 bits (286), Expect = 8.130e-28
Identity = 71/176 (40.34%), Postives = 101/176 (57.39%), Query Frame = 0
Query:    1 MVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRG-----KANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 171
            ++ EVRDARIP++SAN  LD I G  K RL+VLNK+      DL+N  + +RV  RF EQ    ++     G ++  +L W  E G  + + ST G + M+ G+PNVGKSS+IN  RG     K ++G          K+ A VG  PGVT +    ++   P +Y++DTPGVM+P
Sbjct:   47 VIIEVRDARIPWSSANPLLDGI-GNHKPRLVVLNKS------DLANSNMRERVEYRFHEQDMDCMFTSVIKGKHIRNILQWCTEHGKSQFQ-STAGTVVMICGIPNVGKSSMINAFRGISTSLKLSKG----------KKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLP 204          
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Match: A0A7S1T9E7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T9E7_9CHLO)

HSP 1 Score: 107 bits (268), Expect = 4.460e-26
Identity = 62/175 (35.43%), Postives = 105/175 (60.00%), Query Frame = 0
Query:    1 MVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALEQRVLQRFKEQGKAAVYACGRTGTNVNKLL----AWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKANRGGXXXXXXEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVP 171
            +V EVRDAR+PF++AN + + ++  +K R++V+NK+      DL++   +Q++++ F+ + +   ++C +   +V KLL    +W ++      + +    + MVVG+PN GKSSLIN  R  A +        +     A+ G  PGVTRQ+S F++ S P LY++DTPGVM+P
Sbjct:   28 LVMEVRDARVPFSAANPEFETLLA-NKRRMLVMNKS------DLASGQEQQKIIRHFEGRQQRVCFSCAQDLKSVRKLLEGCRSWLKQ------DSTAVTHLMMVVGLPNTGKSSLINRFRQVAPKS--KSPMRQRGMGTAKTGPTPGVTRQLSGFKVGSTPSLYILDTPGVMLP 187          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15296.3979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K059_9PHAE2.170e-7973.85G domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A1V9YN62_9STRA4.270e-3042.44Mitochondrial GTPase 1 n=1 Tax=Achlya hypogyna Tax... [more]
A0A835Z590_9STRA5.170e-3039.24P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1V9Y456_9STRA3.150e-2941.52Mitochondrial GTPase 1 n=1 Tax=Thraustotheca clava... [more]
A0A418AEZ7_9STRA1.110e-2840.91CP-type G domain-containing protein (Fragment) n=1... [more]
A0A6G0WZQ3_9STRA1.790e-2841.24Mitochondrial GTPase 1 n=1 Tax=Aphanomyces euteich... [more]
T0RG29_SAPDV2.470e-2840.94Mitochondrial GTPase 1 n=2 Tax=Saprolegnia TaxID=4... [more]
A0A024UI85_9STRA3.530e-2840.91Mitochondrial GTPase 1 n=3 Tax=Aphanomyces TaxID=1... [more]
A0A485KRB5_9STRA8.130e-2840.34Mitochondrial GTPase 1 n=1 Tax=Aphanomyces stellat... [more]
A0A7S1T9E7_9CHLO4.460e-2635.43Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPRINTSPR00326GTP1OBGcoord: 162..171
score: 19.61
coord: 99..119
score: 44.66
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 100..168
e-value: 2.0E-14
score: 53.6
NoneNo IPR availableGENE3D3.40.50.300coord: 1..171
e-value: 1.2E-31
score: 112.0
NoneNo IPR availablePANTHERPTHR45782FAMILY NOT NAMEDcoord: 1..171
NoneNo IPR availablePANTHERPTHR45782:SF4MITOCHONDRIAL GTPASE 1-RELATEDcoord: 1..171
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15296contigEcto-sp13_S_contig15296:3..2522 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15296.3979.1mRNA_Ecto-sp13_S_contig15296.3979.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15296 3..2528 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15296.3979.1 ID=prot_Ecto-sp13_S_contig15296.3979.1|Name=mRNA_Ecto-sp13_S_contig15296.3979.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=171bp
MVFEVRDARIPFTSANEDLDKIVGPSKARLIVLNKARARQCADLSNQALE
QRVLQRFKEQGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAM
VVGMPNVGKSSLINLLRGKANRGGGGGGDGEGAKQVARVGAMPGVTRQVS
AFRIASNPPLYLVDTPGVMVP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR027417P-loop_NTPase