mRNA_Ecto-sp13_S_contig15286.3973.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15286.3973.1 vs. uniprot
Match: D8LTW0_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTW0_ECTSI) HSP 1 Score: 514 bits (1325), Expect = 2.320e-181 Identity = 251/263 (95.44%), Postives = 255/263 (96.96%), Query Frame = 1
Query: 1 SLSVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEVGFDWRELYAKRMAPPHKPKNPASSTLTVKARHQRFLCPVLEPCLRRQTLTLRTFSRFPDVRTALDTSNFEAVSEEDKVLAYTGPQKLFEGF 789
SLSVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKD T+QTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEV F+WRELYAKRM PPHKPKNPASSTLTVKARHQRFL PVLEPC RR TLT+RTF FP+VRTALDTSNFEAVSEEDKVLAYTGPQKLFEGF
Sbjct: 186 SLSVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDTTLQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEVDFNWRELYAKRMVPPHKPKNPASSTLTVKARHQRFLRPVLEPCFRRLTLTVRTFRGFPEVRTALDTSNFEAVSEEDKVLAYTGPQKLFEGF 448
BLAST of mRNA_Ecto-sp13_S_contig15286.3973.1 vs. uniprot
Match: A0A6H5JZB9_9PHAE (cGMP-dependent protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZB9_9PHAE) HSP 1 Score: 441 bits (1133), Expect = 1.600e-145 Identity = 223/263 (84.79%), Postives = 223/263 (84.79%), Query Frame = 1
Query: 1 SLSVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEVGFDWRELYAKRMAPPHKPKNPASSTLTVKARHQRFLCPVLEPCLRRQTLTLRTFSRFPDVRTALDTSNFEAVSEEDKVLAYTGPQKLFEGF 789
SLSVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEVGFDWRELYAKRMAPPHKPK VRTALDTSNFEAVSEEDKVLAYTGPQKLFEGF
Sbjct: 753 SLSVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEVGFDWRELYAKRMAPPHKPK----------------------------------------VRTALDTSNFEAVSEEDKVLAYTGPQKLFEGF 975
BLAST of mRNA_Ecto-sp13_S_contig15286.3973.1 vs. uniprot
Match: A0A835Z7Z1_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z1_9STRA) HSP 1 Score: 317 bits (812), Expect = 1.760e-100 Identity = 155/259 (59.85%), Postives = 188/259 (72.59%), Query Frame = 1
Query: 13 ASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEVGFDWRELYAKRMAPPHKPKNPASSTLTVKARHQRFLCPVLEPCLRRQTLTLRTFSRFPDVRTALDTSNFEAVSEEDKVLAYTGPQKLFEGF 789
A F+ G VVL LQYLH+MSVAYRDLKPENLL+ QDGY+K+IDFGFAKRIPFKK T+QTKSFTLCGTPDYLAPELVLSRGHDK+VDYWALGCF+YELL GRTPFTDPRQAEIFKKAIRS+RFL+FP GF A+DL+R+LLTP+ +RLGNL+ G++DI+ HP F + F+W +L+ K+M PP++P V A DTS+F ++++ +V+ YTGPQKLFEGF
Sbjct: 490 ARFYGGSVVLCLQYLHKMSVAYRDLKPENLLVAQDGYIKMIDFGFAKRIPFKKGATLQTKSFTLCGTPDYLAPELVLSRGHDKSVDYWALGCFIYELLVGRTPFTDPRQAEIFKKAIRSDRFLSFPIGFDRDAEDLVRKLLTPSPAFRLGNLNNGVRDILEHPWFTKNNFNWDDLFNKKMEPPYRPA----------------------------------------VSNAQDTSHFATINDDVRVIPYTGPQKLFEGF 708
BLAST of mRNA_Ecto-sp13_S_contig15286.3973.1 vs. uniprot
Match: A0A835YV03_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV03_9STRA) HSP 1 Score: 314 bits (804), Expect = 8.950e-99 Identity = 160/261 (61.30%), Postives = 186/261 (71.26%), Query Frame = 1
Query: 7 SVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEVGFDWRELYAKRMAPPHKPKNPASSTLTVKARHQRFLCPVLEPCLRRQTLTLRTFSRFPDVRTALDTSNFEAVSEEDKVLAYTGPQKLFEGF 789
+ A F+ G VVL LQYLH+M+VAYRDLKPENLL+ QDGYLK+IDFGFAKRIPFKK T+QTKSFTLCGTPDYLAPELVLSRGHDK+VDYWALGCF+YELL GRTPFTDPRQAEIFKKAIRS+RFLAFP GF A+DLIR+LLTP+ T+RLGNL+GG++DIM HP F+ GF + LY K+MA P+ P V + LDT +F A ++ V YTGPQKLF+GF
Sbjct: 540 ATARFYGGSVVLCLQYLHKMNVAYRDLKPENLLVAQDGYLKMIDFGFAKRIPFKKGATMQTKSFTLCGTPDYLAPELVLSRGHDKSVDYWALGCFIYELLLGRTPFTDPRQAEIFKKAIRSDRFLAFPIGFDPQAEDLIRKLLTPSPTFRLGNLNGGVKDIMDHPWFSSNGFAFDNLYNKKMATPYTPA----------------------------------------VSSPLDTRHFAASADNVPVTPYTGPQKLFDGF 760
BLAST of mRNA_Ecto-sp13_S_contig15286.3973.1 vs. uniprot
Match: A0A7S2CPB2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPB2_9STRA) HSP 1 Score: 253 bits (645), Expect = 1.930e-79 Identity = 129/262 (49.24%), Postives = 157/262 (59.92%), Query Frame = 1
Query: 7 SVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEV-GFDWRELYAKRMAPPHKPKNPASSTLTVKARHQRFLCPVLEPCLRRQTLTLRTFSRFPDVRTALDTSNFEAVSEEDKVLAYTGPQKLFEGF 789
S A F+ GCV+ QY+H VAYRDLKPENLL+ G+ K+IDFGFAKRIPF KD V KSFT+CGTP+YL+PEL+ S GHDK+VDYWALGC +YELL G+TPF D Q EIF+K S++ LAFP G +A DLIRRLLTPN +RLGNLSG + DIM+H F E F W +L K++ PP+ P +R LDTSNF+ +EED V + G Q F F
Sbjct: 142 SAAMFYAGCVISAFQYVHDKGVAYRDLKPENLLIDSAGFCKIIDFGFAKRIPFMKDGKVCAKSFTICGTPEYLSPELIQSSGHDKSVDYWALGCLVYELLVGQTPFQDDNQREIFRKITNSKKHLAFPKGMNPSAVDLIRRLLTPNPAFRLGNLSGAVDDIMNHAWFGESESFAWEKLNMKQLTPPY----------------------------------------VPIIRDPLDTSNFDPYAEEDHVPRFNGSQAAFASF 363
BLAST of mRNA_Ecto-sp13_S_contig15286.3973.1 vs. uniprot
Match: A0A7S3XNP9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNP9_HETAK) HSP 1 Score: 245 bits (625), Expect = 1.620e-76 Identity = 114/188 (60.64%), Postives = 143/188 (76.06%), Query Frame = 1
Query: 7 SVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEVGFDWRELYAKRMAPPHKP 570
S A F+ CVVL L+Y+H + VAYRDLKPENLLL G+LK+IDFGFAK IPFKK N +QTKSFTLCGTPDYLAPELV S+GHDK+VDYWALGC +YEL+CG+TPF D Q E+FKK + S++ L P GF + A DL+++LL PN ++RLGNL+GG +DIM+H F+ DW + K + P+ P
Sbjct: 138 STARFYAACVVLCLEYVHGLGVAYRDLKPENLLLDNQGFLKMIDFGFAKYIPFKKGNQIQTKSFTLCGTPDYLAPELVRSKGHDKSVDYWALGCLVYELICGQTPFQDNYQPEVFKKIVNSKKSLHIPRGFDSDAADLVKKLLAPNPSFRLGNLNGGARDIMNHAWFDGKT-DWDGILGKTVQAPYVP 324
BLAST of mRNA_Ecto-sp13_S_contig15286.3973.1 vs. uniprot
Match: A0A7S2R9B3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9B3_9STRA) HSP 1 Score: 238 bits (606), Expect = 1.250e-74 Identity = 117/260 (45.00%), Postives = 151/260 (58.08%), Query Frame = 1
Query: 10 VASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEVGFDWRELYAKRMAPPHKPKNPASSTLTVKARHQRFLCPVLEPCLRRQTLTLRTFSRFPDVRTALDTSNFEAVSEEDKVLAYTGPQKLFEGF 789
V+ F+C CVV ++H + VAYRDLKPENLL+ GY+KVIDFGFAK IPF+K + KSFTLCGTP+YL+PELVLS+GHDK+ DYWALGC LYELL G TPF + E+FK+ ++S ++L FP+ QDLI +LLT N RLGNL G D+ HP F +V F+W L + P+ P ++ LDTSNFE+ EE+ V Y G Q++F+ F
Sbjct: 64 VSQFYCSCVVSAFSHIHGLGVAYRDLKPENLLMDATGYIKVIDFGFAKHIPFEKRGKIHHKSFTLCGTPEYLSPELVLSKGHDKSADYWALGCLLYELLVGHTPFANDNHQEVFKRILQSTKYLRFPSRMGKKVQDLIHKLLTTNPIMRLGNLEKGTDDVKEHPWFKDVNFEWERLERRGYKAPY----------------------------------------VPVIKDPLDTSNFESYEEEEDVKKYKGNQEIFKEF 283
BLAST of mRNA_Ecto-sp13_S_contig15286.3973.1 vs. uniprot
Match: A0A7S2RAC3_9STRA (cGMP-dependent protein kinase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAC3_9STRA) HSP 1 Score: 246 bits (627), Expect = 2.170e-72 Identity = 125/259 (48.26%), Postives = 153/259 (59.07%), Query Frame = 1
Query: 13 ASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEVGFDWRELYAKRMAPPHKPKNPASSTLTVKARHQRFLCPVLEPCLRRQTLTLRTFSRFPDVRTALDTSNFEAVSEEDKVLAYTGPQKLFEGF 789
A F+ GCV+ Y+H VAYRDLKPENLL+ +G+LKVIDFGFAKRIPF K+ KSFTLCGTP+YL+PELVLS+GHDK+ DYWALGC +YELL G TPF Q EIFK+ I+S R+L FP A DL+ +LLT N YRLGNL G +QDIM+H F + FDW L AK+ P PK ++ LDTSNF+ E+ + YTG Q+ F+GF
Sbjct: 597 AQFYSGCVISAFNYIHGKGVAYRDLKPENLLVTAEGFLKVIDFGFAKRIPFVKNGRTSAKSFTLCGTPEYLSPELVLSKGHDKSADYWALGCLVYELLIGHTPFQHDSQQEIFKRIIQSSRYLHFPKNMDTGAVDLVTKLLTVNPAYRLGNLQGRVQDIMNHQWFKKTKFDWAALDAKQQVAPFVPK----------------------------------------IKDPLDTSNFDPYPEDVHIPPYTGSQEPFQGF 815
BLAST of mRNA_Ecto-sp13_S_contig15286.3973.1 vs. uniprot
Match: A0A397ECP4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ECP4_9STRA) HSP 1 Score: 221 bits (563), Expect = 5.020e-69 Identity = 104/186 (55.91%), Postives = 131/186 (70.43%), Query Frame = 1
Query: 13 ASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEVGFDWRELYAKRMAPPHKP 570
A F+ VV +YL + VAYRDLKPENL++ +GYLK++DFGFAK IPF K + KSFTLCGTP+YLAPELVL++GHDK+VDYWALGC +YEL+ GRTPF Q IF+K I ++ L F A F AQDLI +LL PN RLG+L+GG+ D+++HP F FDW+ L K + PH P
Sbjct: 1 ARFYAANVVEVFRYLQSLGVAYRDLKPENLMIDHEGYLKMVDFGFAKHIPFYKGAQLCEKSFTLCGTPEYLAPELVLNKGHDKSVDYWALGCLIYELMSGRTPFQHQEQQRIFEKIIHAKTALKFHAKFDPLAQDLITKLLEPNPGLRLGSLAGGMNDVVNHPWFATANFDWKGLVNKTLRAPHVP 186
BLAST of mRNA_Ecto-sp13_S_contig15286.3973.1 vs. uniprot
Match: A0A7S2G969_9STRA (cGMP-dependent protein kinase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G969_9STRA) HSP 1 Score: 234 bits (596), Expect = 4.490e-68 Identity = 111/262 (42.37%), Postives = 154/262 (58.78%), Query Frame = 1
Query: 7 SVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSERFLAFPAGFPATAQDLIRRLLTPNATYRLGNLSGGIQDIMSHPMFNEVG-FDWRELYAKRMAPPHKPKNPASSTLTVKARHQRFLCPVLEPCLRRQTLTLRTFSRFPDVRTALDTSNFEAVSEEDKVLAYTGPQKLFEGF 789
S A F+ GC++ Y+H+M+VAYRDLKPEN+++ GYLK+IDFGFAK IP+KK+ + + S+T+CGTP+YLAPEL+ S+GHDK+VDYWALGC +YEL+CGRTPF Q ++F+ + S + L FP+ F A+DL+++LL TYRLGN G+ +IM H F F W +L + P+ P +R ALDTSNF+ E+ V+ Y GPQ +F+ F
Sbjct: 569 SAAMFYSGCIISAFHYIHEMNVAYRDLKPENIMIDSSGYLKMIDFGFAKTIPYKKNGEIHSSSYTICGTPEYLAPELIQSKGHDKSVDYWALGCLVYELICGRTPFAHENQRDLFQNILYSRKTLKFPSKFNVQAKDLVQQLLKQEPTYRLGNTKDGVDEIMQHKWFKTSSTFTWEDLNQMNLKAPY----------------------------------------VPTIRGALDTSNFDPYPEDSHVVTYRGPQDVFDEF 790 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15286.3973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15286.3973.1 >prot_Ecto-sp13_S_contig15286.3973.1 ID=prot_Ecto-sp13_S_contig15286.3973.1|Name=mRNA_Ecto-sp13_S_contig15286.3973.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=264bp SLSVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAback to top mRNA from alignment at Ecto-sp13_S_contig15286:1500..4205- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15286.3973.1 ID=mRNA_Ecto-sp13_S_contig15286.3973.1|Name=mRNA_Ecto-sp13_S_contig15286.3973.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2706bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15286:1500..4205- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15286:1500..4205- >mRNA_Ecto-sp13_S_contig15286.3973.1 ID=mRNA_Ecto-sp13_S_contig15286.3973.1|Name=mRNA_Ecto-sp13_S_contig15286.3973.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=792bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15286:1500..4205- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |